Structural Classification of Proteins
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Family: HIV-1 gp41 fragments

Lineage:

  1. Root: scop
  2. Class: Peptides [58231]
    Peptides and fragments. Not a true class
  3. Fold: HIV-1 gp41 fragments [70010]
  4. Superfamily: HIV-1 gp41 fragments [70011]
    link to SUPERFAMILY database - Superfamily
  5. Family: HIV-1 gp41 fragments [70012]

Protein Domains:

  1. HIV-1 gp41 TRP-rich peptide [70013]
    1. Synthetic [70014] (2)
      1. 1jau picpic
        bound to dpc micelles
        1. chain a [66474] picpiclink
      2. 1jav picpic
        bound to dpc micelles
        1. chain a [66475] picpiclink
  2. Peptide mimicking the loop 600-612 [82981]
    1. Synthetic [82982] (8)
      1. 1j9v picpic
        1. chain a [84136] picpiclink
      2. 1jar picpic
        1. chain a [84142] picpiclink
      3. 1jc8 picpic
        1. chain a [84153] picpiclink
      4. 1j8z picpic
        1. chain a [84134] picpiclink
      5. 1jaa picpic
        1. chain a [84137] picpiclink
      6. 1jcp picpic
        1. chain a [84166] picpiclink
      7. 1im7 picpic
        cyclic analogue
        1. chain a [76752] picpiclink
      8. 1j8n picpic
        1. chain a [84133] picpiclink
  3. Fragment 659-671 13-mer peptide [82983]
    2f5 mab epitope
    1. Synthetic [82984] (3)
      1. 1mzi picpic
        1. chain a [91498] picpiclink
      2. 1lcx picpic
        1. chain a [77883] picpiclink
      3. 1lb0 picpic
        1. chain a [77868] picpiclink
  4. N-Terminal fusion peptide [90288]
    1. Synthetic [90289] (1)
      1. 1p5a picpic
        1. chain a [87795] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk