Fold: Zinc finger design

Lineage:

1. Root: scop
2. Class: Designed proteins [58788]
   Experimental structures of proteins with essentially non-natural sequences. Not a true class
3. Fold: Zinc finger design [58856]

Superfamilies:

1. Zinc finger design [58857] (1)
   uperfamily
   1. Zinc finger design [58858] (11)
      1. Designed zinc finger protein [58859]
         1. Synthetic consensus sequence, non-biological source [58860] (1)
            1. 1mey
               1. chain c [46430]
               2. chain f [46431]
               3. chain g [46432]
         2. Mus musculus [TaxId: 10090] [161315] (1)
            1. 2ee8
               automatically matched to d1meyf_
               1. region a:15-96 [146806]
         3. Homo sapiens [TaxId: 9606] [161316] (87)
            1. 2eqw
               automatically matched to d1meyg_
               1. region a:407-434 [146987]
            2. 2el5
               automatically matched to d1meyg_
               1. region a:6-33 [146886]
            3. 2emm
               automatically matched to d1meyg_
               1. region a:8-35 [146923]
            4. 2en0
               automatically matched to d1meyg_
               1. region a:6-33 [146938]
            5. 2el4
               automatically matched to d1meyg_
               1. region a:8-35 [146885]
            6. 2eok
               automatically matched to d1meyg_
               1. region a:6-33 [146955]
            7. 2epu
               automatically matched to d1meyg_
               1. region a:100-127 [146975]
            8. 2eq0
               automatically matched to d1meyg_
               1. region a:452-479 [146980]
            9. 2eq1
               automatically matched to d1meyg_
               1. region a:480-507 [146981]
            10. 2yu8
                automatically matched to d1meyg_
                1. region a:8-35 [153778]
            11. 2emf
                automatically matched to d1meyg_
                1. region a:8-35 [146916]
            12. 2emg
                automatically matched to d1meyg_
                1. region a:8-35 [146917]
            13. 2emv
                automatically matched to d1meyg_
                1. region a:8-35 [146934]
            14. 2emw
                automatically matched to d1meyg_
                1. region a:6-33 [146935]
            15. 2eoj
                automatically matched to d1meyg_
                1. region a:8-35 [146954]
            16. 2eop
                automatically matched to d1meyg_
                1. region a:8-35 [146959]
            17. 2eor
                automatically matched to d1meyg_
                1. region a:8-35 [146961]
            18. 2eoz
                automatically matched to d1meyg_
                1. region a:8-35 [146965]
            19. 2epx
                automatically matched to d1meyg_
                1. region a:471-496 [146978]
            20. 2eq4
                automatically matched to d1meyg_
                1. region a:451-478 [146984]
            21. 2ely
                automatically matched to d1meyg_
                1. region a:8-35 [146905]
            22. 2em9
                automatically matched to d1meyg_
                1. region a:8-35 [146912]
            23. 2en1
                automatically matched to d1meyg_
                1. region a:8-35 [146939]
            24. 2en6
                automatically matched to d1meyg_
                1. region a:8-35 [146943]
            25. 2eol
                automatically matched to d1meyg_
                1. region a:6-33 [146956]
            26. 2ep2
                automatically matched to d1meyg_
                1. region a:8-35 [146968]
            27. 2yrh
                automatically matched to d1meyg_
                1. region a:6-33 [153742]
            28. 2yte
                automatically matched to d1meyg_
                1. region a:6-33 [153761]
            29. 2ytp
                automatically matched to d1meyg_
                1. region a:8-35 [153771]
            30. 2em1
                automatically matched to d1meyg_
                1. region a:6-33 [146907]
            31. 2em2
                automatically matched to d1meyg_
                1. region a:8-35 [146908]
            32. 2eme
                automatically matched to d1meyg_
                1. region a:8-35 [146915]
            33. 2emh
                automatically matched to d1meyg_
                1. region a:8-35 [146918]
            34. 2emj
                automatically matched to d1meyg_
                1. region a:8-35 [146920]
            35. 2enf
                automatically matched to d1meyg_
                1. region a:8-35 [146947]
            36. 2eoe
                automatically matched to d1meyg_
                1. region a:8-35 [146950]
            37. 2eof
                automatically matched to d1meyg_
                1. region a:8-35 [146951]
            38. 2eoh
                automatically matched to d1meyg_
                1. region a:8-35 [146953]
            39. 2eov
                automatically matched to d1meyg_
                1. region a:8-35 [146962]
            40. 2ep1
                automatically matched to d1meyg_
                1. region a:8-35 [146967]
            41. 2epv
                automatically matched to d1meyg_
                1. region a:803-830 [146976]
            42. 2epw
                automatically matched to d1meyg_
                1. region a:915-942 [146977]
            43. 2epz
                automatically matched to d1meyg_
                1. region a:500-527 [146979]
            44. 2eq2
                automatically matched to d1meyg_
                1. region a:676-703 [146982]
            45. 2ysv
                automatically matched to d1meyg_
                1. region a:753-780 [153754]
            46. 2ytf
                automatically matched to d1meyg_
                1. region a:8-35 [153762]
            47. 2ytg
                automatically matched to d1meyg_
                1. region a:8-35 [153763]
            48. 2yti
                automatically matched to d1meyg_
                1. region a:8-35 [153765]
            49. 2ytj
                automatically matched to d1meyg_
                1. region a:8-35 [153766]
            50. 2ytq
                automatically matched to d1meyg_
                1. region a:9-35 [153772]
            51. 2yts
                automatically matched to d1meyg_
                1. region a:8-35 [153774]
            52. 2ytt
                automatically matched to d1meyg_
                1. region a:9-35 [153775]
            53. 2elz
                automatically matched to d1meyg_
                1. region a:10-35 [146906]
            54. 2em3
                automatically matched to d1meyg_
                1. region a:8-35 [146909]
            55. 2em6
                automatically matched to d1meyg_
                1. region a:9-35 [146910]
            56. 2em8
                automatically matched to d1meyg_
                1. region a:8-35 [146911]
            57. 2ema
                automatically matched to d1meyg_
                1. region a:8-35 [146913]
            58. 2emc
                automatically matched to d1meyg_
                1. region a:8-35 [146914]
            59. 2emk
                automatically matched to d1meyg_
                1. region a:8-35 [146921]
            60. 2emp
                automatically matched to d1meyg_
                1. region a:8-35 [146924]
            61. 2emy
                automatically matched to d1meyg_
                1. region a:8-35 [146936]
            62. 2emz
                automatically matched to d1meyg_
                1. region a:8-35 [146937]
            63. 2en3
                automatically matched to d1meyg_
                1. region a:8-35 [146941]
            64. 2ene
                automatically matched to d1meyg_
                1. region a:8-35 [146946]
            65. 2enh
                automatically matched to d1meyg_
                1. region a:8-35 [146948]
            66. 2eoo
                automatically matched to d1meyg_
                1. region a:8-35 [146958]
            67. 2eow
                automatically matched to d1meyg_
                1. region a:8-35 [146963]
            68. 2ep0
                automatically matched to d1meyg_
                1. region a:8-35 [146966]
            69. 2yrj
                automatically matched to d1meyg_
                1. region a:8-35 [153743]
            70. 2ytd
                automatically matched to d1meyg_
                1. region a:8-35 [153760]
            71. 2yth
                automatically matched to d1meyg_
                1. region a:8-35 [153764]
            72. 2ytk
                automatically matched to d1meyg_
                1. region a:8-35 [153767]
            73. 2ytn
                automatically matched to d1meyg_
                1. region a:8-35 [153769]
            74. 2yto
                automatically matched to d1meyg_
                1. region a:8-35 [153770]
            75. 2emi
                automatically matched to d1meyg_
                1. region a:8-35 [146919]
            76. 2eml
                automatically matched to d1meyg_
                1. region a:8-35 [146922]
            77. 2eog
                automatically matched to d1meyg_
                1. region a:6-33 [146952]
            78. 2eox
                automatically matched to d1meyg_
                1. region a:8-35 [146964]
            79. 2yta
                automatically matched to d1meyg_
                1. region a:134-161 [153758]
            80. 2ytm
                automatically matched to d1meyg_
                1. region a:8-35 [153768]
            81. 2en4
                automatically matched to d1meyg_
                1. region a:8-35 [146942]
            82. 2eoq
                automatically matched to d1meyg_
                1. region a:8-35 [146960]
            83. 2ytr
                automatically matched to d1meyg_
                1. region a:8-35 [153773]
            84. 2en2
                automatically matched to d1meyg_
                1. region a:8-34 [146940]
            85. 2en7
                automatically matched to d1meyg_
                1. region a:8-35 [146944]
            86. 2eon
                automatically matched to d1meyg_
                1. region a:8-35 [146957]
            87. 2ytb
                automatically matched to d1meyg_
                1. region a:192-218 [153759]
      2. Zinc finger with an artificial beta-turn [58861]
         original sequence taken from the third zinc finger domain of the human transcriptional repressor protein yy1
         1. Synthetic, based on Homo sapiens sequence [58862] (1)
            1. 1znm
               1. chain a [46433]
         2. Homo sapiens [TaxId: 9606] [161317] (4)
            1. 2ent
               automatically matched to d1znma_
               1. region a:351-377 [146949]
            2. 2ep3
               automatically matched to d1znma_
               1. region a:18-37 [146969]
            3. 2eq3
               automatically matched to d1znma_
               1. region a:714-733 [146983]
            4. 2ysp
               automatically matched to d1znma_
               1. region a:18-37 [153752]
      3. FSD-EY [64669]
         1. Synthetic [64670] (1)
            1. 1fme
               1. chain a [59878]
      4. TATA box-binding zinc finger, TATAZF [64671]
         1. Mouse (Mus musculus), Zif268 based [TaxId: 10090] [64672] (2)
            1. 1g2f
               clone 6
               1. chain c [60222]
               2. chain f [60223]
            2. 1g2d
               clone 2
               1. chain c [60220]
               2. chain f [60221]
      5. E6-binding zinc finger, different constructs [111544]
         1. Synthetic [111545] (2)
            1. 1rik
               1. chain a [104952]
            2. 1rim
               1. chain a [104953]
         2. Homo sapiens [TaxId: 9606] [161318] (1)
            1. 2en9
               automatically matched to d1rika_
               1. region a:13-39 [146945]
      6. AART, designed six-finger protein [144340]
         1. synthetic [144341] (2)
            1. 2i13
               1. region a:31-184 [136964]
            2. 2i13
               automatically matched to 2I13 A:31-184
               1. region b:31-178 [136965]
      7. HIV REV-targetting Znf29 [161319]
         1. synthetic [161320] (2)
            1. 2ab3
               1. region a:1-29 [146045]
            2. 2ab7
               automatically matched to 2AB3 A:1-29
               1. region a:1-28 [146046]

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk