Superfamily: Zinc finger design

uperfamily

Lineage:

1. Root: scop
2. Class: Designed proteins [58788]
   Experimental structures of proteins with essentially non-natural sequences. Not a true class
3. Fold: Zinc finger design [58856]
4. Superfamily: Zinc finger design [58857]
   uperfamily

Families:

1. Zinc finger design [58858] (11)
   1. Designed zinc finger protein [58859]
      1. Synthetic consensus sequence, non-biological source [58860] (1)
         1. 1mey
            1. chain c [46430]
            2. chain f [46431]
            3. chain g [46432]
      2. Mus musculus [TaxId: 10090] [161315] (1)
         1. 2ee8
            automatically matched to d1meyf_
            1. region a:15-96 [146806]
      3. Homo sapiens [TaxId: 9606] [161316] (87)
         1. 2eqw
            automatically matched to d1meyg_
            1. region a:407-434 [146987]
         2. 2el5
            automatically matched to d1meyg_
            1. region a:6-33 [146886]
         3. 2emm
            automatically matched to d1meyg_
            1. region a:8-35 [146923]
         4. 2en0
            automatically matched to d1meyg_
            1. region a:6-33 [146938]
         5. 2el4
            automatically matched to d1meyg_
            1. region a:8-35 [146885]
         6. 2eok
            automatically matched to d1meyg_
            1. region a:6-33 [146955]
         7. 2epu
            automatically matched to d1meyg_
            1. region a:100-127 [146975]
         8. 2eq0
            automatically matched to d1meyg_
            1. region a:452-479 [146980]
         9. 2eq1
            automatically matched to d1meyg_
            1. region a:480-507 [146981]
         10. 2yu8
             automatically matched to d1meyg_
             1. region a:8-35 [153778]
         11. 2emf
             automatically matched to d1meyg_
             1. region a:8-35 [146916]
         12. 2emg
             automatically matched to d1meyg_
             1. region a:8-35 [146917]
         13. 2emv
             automatically matched to d1meyg_
             1. region a:8-35 [146934]
         14. 2emw
             automatically matched to d1meyg_
             1. region a:6-33 [146935]
         15. 2eoj
             automatically matched to d1meyg_
             1. region a:8-35 [146954]
         16. 2eop
             automatically matched to d1meyg_
             1. region a:8-35 [146959]
         17. 2eor
             automatically matched to d1meyg_
             1. region a:8-35 [146961]
         18. 2eoz
             automatically matched to d1meyg_
             1. region a:8-35 [146965]
         19. 2epx
             automatically matched to d1meyg_
             1. region a:471-496 [146978]
         20. 2eq4
             automatically matched to d1meyg_
             1. region a:451-478 [146984]
         21. 2ely
             automatically matched to d1meyg_
             1. region a:8-35 [146905]
         22. 2em9
             automatically matched to d1meyg_
             1. region a:8-35 [146912]
         23. 2en1
             automatically matched to d1meyg_
             1. region a:8-35 [146939]
         24. 2en6
             automatically matched to d1meyg_
             1. region a:8-35 [146943]
         25. 2eol
             automatically matched to d1meyg_
             1. region a:6-33 [146956]
         26. 2ep2
             automatically matched to d1meyg_
             1. region a:8-35 [146968]
         27. 2yrh
             automatically matched to d1meyg_
             1. region a:6-33 [153742]
         28. 2yte
             automatically matched to d1meyg_
             1. region a:6-33 [153761]
         29. 2ytp
             automatically matched to d1meyg_
             1. region a:8-35 [153771]
         30. 2em1
             automatically matched to d1meyg_
             1. region a:6-33 [146907]
         31. 2em2
             automatically matched to d1meyg_
             1. region a:8-35 [146908]
         32. 2eme
             automatically matched to d1meyg_
             1. region a:8-35 [146915]
         33. 2emh
             automatically matched to d1meyg_
             1. region a:8-35 [146918]
         34. 2emj
             automatically matched to d1meyg_
             1. region a:8-35 [146920]
         35. 2enf
             automatically matched to d1meyg_
             1. region a:8-35 [146947]
         36. 2eoe
             automatically matched to d1meyg_
             1. region a:8-35 [146950]
         37. 2eof
             automatically matched to d1meyg_
             1. region a:8-35 [146951]
         38. 2eoh
             automatically matched to d1meyg_
             1. region a:8-35 [146953]
         39. 2eov
             automatically matched to d1meyg_
             1. region a:8-35 [146962]
         40. 2ep1
             automatically matched to d1meyg_
             1. region a:8-35 [146967]
         41. 2epv
             automatically matched to d1meyg_
             1. region a:803-830 [146976]
         42. 2epw
             automatically matched to d1meyg_
             1. region a:915-942 [146977]
         43. 2epz
             automatically matched to d1meyg_
             1. region a:500-527 [146979]
         44. 2eq2
             automatically matched to d1meyg_
             1. region a:676-703 [146982]
         45. 2ysv
             automatically matched to d1meyg_
             1. region a:753-780 [153754]
         46. 2ytf
             automatically matched to d1meyg_
             1. region a:8-35 [153762]
         47. 2ytg
             automatically matched to d1meyg_
             1. region a:8-35 [153763]
         48. 2yti
             automatically matched to d1meyg_
             1. region a:8-35 [153765]
         49. 2ytj
             automatically matched to d1meyg_
             1. region a:8-35 [153766]
         50. 2ytq
             automatically matched to d1meyg_
             1. region a:9-35 [153772]
         51. 2yts
             automatically matched to d1meyg_
             1. region a:8-35 [153774]
         52. 2ytt
             automatically matched to d1meyg_
             1. region a:9-35 [153775]
         53. 2elz
             automatically matched to d1meyg_
             1. region a:10-35 [146906]
         54. 2em3
             automatically matched to d1meyg_
             1. region a:8-35 [146909]
         55. 2em6
             automatically matched to d1meyg_
             1. region a:9-35 [146910]
         56. 2em8
             automatically matched to d1meyg_
             1. region a:8-35 [146911]
         57. 2ema
             automatically matched to d1meyg_
             1. region a:8-35 [146913]
         58. 2emc
             automatically matched to d1meyg_
             1. region a:8-35 [146914]
         59. 2emk
             automatically matched to d1meyg_
             1. region a:8-35 [146921]
         60. 2emp
             automatically matched to d1meyg_
             1. region a:8-35 [146924]
         61. 2emy
             automatically matched to d1meyg_
             1. region a:8-35 [146936]
         62. 2emz
             automatically matched to d1meyg_
             1. region a:8-35 [146937]
         63. 2en3
             automatically matched to d1meyg_
             1. region a:8-35 [146941]
         64. 2ene
             automatically matched to d1meyg_
             1. region a:8-35 [146946]
         65. 2enh
             automatically matched to d1meyg_
             1. region a:8-35 [146948]
         66. 2eoo
             automatically matched to d1meyg_
             1. region a:8-35 [146958]
         67. 2eow
             automatically matched to d1meyg_
             1. region a:8-35 [146963]
         68. 2ep0
             automatically matched to d1meyg_
             1. region a:8-35 [146966]
         69. 2yrj
             automatically matched to d1meyg_
             1. region a:8-35 [153743]
         70. 2ytd
             automatically matched to d1meyg_
             1. region a:8-35 [153760]
         71. 2yth
             automatically matched to d1meyg_
             1. region a:8-35 [153764]
         72. 2ytk
             automatically matched to d1meyg_
             1. region a:8-35 [153767]
         73. 2ytn
             automatically matched to d1meyg_
             1. region a:8-35 [153769]
         74. 2yto
             automatically matched to d1meyg_
             1. region a:8-35 [153770]
         75. 2emi
             automatically matched to d1meyg_
             1. region a:8-35 [146919]
         76. 2eml
             automatically matched to d1meyg_
             1. region a:8-35 [146922]
         77. 2eog
             automatically matched to d1meyg_
             1. region a:6-33 [146952]
         78. 2eox
             automatically matched to d1meyg_
             1. region a:8-35 [146964]
         79. 2yta
             automatically matched to d1meyg_
             1. region a:134-161 [153758]
         80. 2ytm
             automatically matched to d1meyg_
             1. region a:8-35 [153768]
         81. 2en4
             automatically matched to d1meyg_
             1. region a:8-35 [146942]
         82. 2eoq
             automatically matched to d1meyg_
             1. region a:8-35 [146960]
         83. 2ytr
             automatically matched to d1meyg_
             1. region a:8-35 [153773]
         84. 2en2
             automatically matched to d1meyg_
             1. region a:8-34 [146940]
         85. 2en7
             automatically matched to d1meyg_
             1. region a:8-35 [146944]
         86. 2eon
             automatically matched to d1meyg_
             1. region a:8-35 [146957]
         87. 2ytb
             automatically matched to d1meyg_
             1. region a:192-218 [153759]
   2. Zinc finger with an artificial beta-turn [58861]
      original sequence taken from the third zinc finger domain of the human transcriptional repressor protein yy1
      1. Synthetic, based on Homo sapiens sequence [58862] (1)
         1. 1znm
            1. chain a [46433]
      2. Homo sapiens [TaxId: 9606] [161317] (4)
         1. 2ent
            automatically matched to d1znma_
            1. region a:351-377 [146949]
         2. 2ep3
            automatically matched to d1znma_
            1. region a:18-37 [146969]
         3. 2eq3
            automatically matched to d1znma_
            1. region a:714-733 [146983]
         4. 2ysp
            automatically matched to d1znma_
            1. region a:18-37 [153752]
   3. FSD-EY [64669]
      1. Synthetic [64670] (1)
         1. 1fme
            1. chain a [59878]
   4. TATA box-binding zinc finger, TATAZF [64671]
      1. Mouse (Mus musculus), Zif268 based [TaxId: 10090] [64672] (2)
         1. 1g2f
            clone 6
            1. chain c [60222]
            2. chain f [60223]
         2. 1g2d
            clone 2
            1. chain c [60220]
            2. chain f [60221]
   5. E6-binding zinc finger, different constructs [111544]
      1. Synthetic [111545] (2)
         1. 1rik
            1. chain a [104952]
         2. 1rim
            1. chain a [104953]
      2. Homo sapiens [TaxId: 9606] [161318] (1)
         1. 2en9
            automatically matched to d1rika_
            1. region a:13-39 [146945]
   6. AART, designed six-finger protein [144340]
      1. synthetic [144341] (2)
         1. 2i13
            1. region a:31-184 [136964]
         2. 2i13
            automatically matched to 2I13 A:31-184
            1. region b:31-178 [136965]
   7. HIV REV-targetting Znf29 [161319]
      1. synthetic [161320] (2)
         1. 2ab3
            1. region a:1-29 [146045]
         2. 2ab7
            automatically matched to 2AB3 A:1-29
            1. region a:1-28 [146046]

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk