Structural Classification of Proteins
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Family: Zinc finger design

Lineage:

  1. Root: scop
  2. Class: Designed proteins [58788]
    Experimental structures of proteins with essentially non-natural sequences. Not a true class
  3. Fold: Zinc finger design [58856]
  4. Superfamily: Zinc finger design [58857]
    link to SUPERFAMILY database - Superfamily
  5. Family: Zinc finger design [58858]

Protein Domains:

  1. Designed zinc finger protein [58859]
    1. Synthetic consensus sequence, non-biological source [58860] (1)
      1. 1mey picpic
        1. chain c [46430] picpiclink
        2. chain f [46431] picpiclink
        3. chain g [46432] picpiclink
    2. Mus musculus [TaxId: 10090] [161315] (1)
      1. 2ee8 picpic
        automatically matched to d1meyf_
        1. region a:15-96 [146806] picpiclink
    3. Homo sapiens [TaxId: 9606] [161316] (87)
      1. 2eqw picpic
        automatically matched to d1meyg_
        1. region a:407-434 [146987] picpiclink
      2. 2el5 picpic
        automatically matched to d1meyg_
        1. region a:6-33 [146886] picpiclink
      3. 2emm picpic
        automatically matched to d1meyg_
        1. region a:8-35 [146923] picpiclink
      4. 2en0 picpic
        automatically matched to d1meyg_
        1. region a:6-33 [146938] picpiclink
      5. 2el4 picpic
        automatically matched to d1meyg_
        1. region a:8-35 [146885] picpiclink
      6. 2eok picpic
        automatically matched to d1meyg_
        1. region a:6-33 [146955] picpiclink
      7. 2epu picpic
        automatically matched to d1meyg_
        1. region a:100-127 [146975] picpiclink
      8. 2eq0 picpic
        automatically matched to d1meyg_
        1. region a:452-479 [146980] picpiclink
      9. 2eq1 picpic
        automatically matched to d1meyg_
        1. region a:480-507 [146981] picpiclink
      10. 2yu8 picpic
        automatically matched to d1meyg_
        1. region a:8-35 [153778] picpiclink
      11. 2emf picpic
        automatically matched to d1meyg_
        1. region a:8-35 [146916] picpiclink
      12. 2emg picpic
        automatically matched to d1meyg_
        1. region a:8-35 [146917] picpiclink
      13. 2emv picpic
        automatically matched to d1meyg_
        1. region a:8-35 [146934] picpiclink
      14. 2emw picpic
        automatically matched to d1meyg_
        1. region a:6-33 [146935] picpiclink
      15. 2eoj picpic
        automatically matched to d1meyg_
        1. region a:8-35 [146954] picpiclink
      16. 2eop picpic
        automatically matched to d1meyg_
        1. region a:8-35 [146959] picpiclink
      17. 2eor picpic
        automatically matched to d1meyg_
        1. region a:8-35 [146961] picpiclink
      18. 2eoz picpic
        automatically matched to d1meyg_
        1. region a:8-35 [146965] picpiclink
      19. 2epx picpic
        automatically matched to d1meyg_
        1. region a:471-496 [146978] picpiclink
      20. 2eq4 picpic
        automatically matched to d1meyg_
        1. region a:451-478 [146984] picpiclink
      21. 2ely picpic
        automatically matched to d1meyg_
        1. region a:8-35 [146905] picpiclink
      22. 2em9 picpic
        automatically matched to d1meyg_
        1. region a:8-35 [146912] picpiclink
      23. 2en1 picpic
        automatically matched to d1meyg_
        1. region a:8-35 [146939] picpiclink
      24. 2en6 picpic
        automatically matched to d1meyg_
        1. region a:8-35 [146943] picpiclink
      25. 2eol picpic
        automatically matched to d1meyg_
        1. region a:6-33 [146956] picpiclink
      26. 2ep2 picpic
        automatically matched to d1meyg_
        1. region a:8-35 [146968] picpiclink
      27. 2yrh picpic
        automatically matched to d1meyg_
        1. region a:6-33 [153742] picpiclink
      28. 2yte picpic
        automatically matched to d1meyg_
        1. region a:6-33 [153761] picpiclink
      29. 2ytp picpic
        automatically matched to d1meyg_
        1. region a:8-35 [153771] picpiclink
      30. 2em1 picpic
        automatically matched to d1meyg_
        1. region a:6-33 [146907] picpiclink
      31. 2em2 picpic
        automatically matched to d1meyg_
        1. region a:8-35 [146908] picpiclink
      32. 2eme picpic
        automatically matched to d1meyg_
        1. region a:8-35 [146915] picpiclink
      33. 2emh picpic
        automatically matched to d1meyg_
        1. region a:8-35 [146918] picpiclink
      34. 2emj picpic
        automatically matched to d1meyg_
        1. region a:8-35 [146920] picpiclink
      35. 2enf picpic
        automatically matched to d1meyg_
        1. region a:8-35 [146947] picpiclink
      36. 2eoe picpic
        automatically matched to d1meyg_
        1. region a:8-35 [146950] picpiclink
      37. 2eof picpic
        automatically matched to d1meyg_
        1. region a:8-35 [146951] picpiclink
      38. 2eoh picpic
        automatically matched to d1meyg_
        1. region a:8-35 [146953] picpiclink
      39. 2eov picpic
        automatically matched to d1meyg_
        1. region a:8-35 [146962] picpiclink
      40. 2ep1 picpic
        automatically matched to d1meyg_
        1. region a:8-35 [146967] picpiclink
      41. 2epv picpic
        automatically matched to d1meyg_
        1. region a:803-830 [146976] picpiclink
      42. 2epw picpic
        automatically matched to d1meyg_
        1. region a:915-942 [146977] picpiclink
      43. 2epz picpic
        automatically matched to d1meyg_
        1. region a:500-527 [146979] picpiclink
      44. 2eq2 picpic
        automatically matched to d1meyg_
        1. region a:676-703 [146982] picpiclink
      45. 2ysv picpic
        automatically matched to d1meyg_
        1. region a:753-780 [153754] picpiclink
      46. 2ytf picpic
        automatically matched to d1meyg_
        1. region a:8-35 [153762] picpiclink
      47. 2ytg picpic
        automatically matched to d1meyg_
        1. region a:8-35 [153763] picpiclink
      48. 2yti picpic
        automatically matched to d1meyg_
        1. region a:8-35 [153765] picpiclink
      49. 2ytj picpic
        automatically matched to d1meyg_
        1. region a:8-35 [153766] picpiclink
      50. 2ytq picpic
        automatically matched to d1meyg_
        1. region a:9-35 [153772] picpiclink
      51. 2yts picpic
        automatically matched to d1meyg_
        1. region a:8-35 [153774] picpiclink
      52. 2ytt picpic
        automatically matched to d1meyg_
        1. region a:9-35 [153775] picpiclink
      53. 2elz picpic
        automatically matched to d1meyg_
        1. region a:10-35 [146906] picpiclink
      54. 2em3 picpic
        automatically matched to d1meyg_
        1. region a:8-35 [146909] picpiclink
      55. 2em6 picpic
        automatically matched to d1meyg_
        1. region a:9-35 [146910] picpiclink
      56. 2em8 picpic
        automatically matched to d1meyg_
        1. region a:8-35 [146911] picpiclink
      57. 2ema picpic
        automatically matched to d1meyg_
        1. region a:8-35 [146913] picpiclink
      58. 2emc picpic
        automatically matched to d1meyg_
        1. region a:8-35 [146914] picpiclink
      59. 2emk picpic
        automatically matched to d1meyg_
        1. region a:8-35 [146921] picpiclink
      60. 2emp picpic
        automatically matched to d1meyg_
        1. region a:8-35 [146924] picpiclink
      61. 2emy picpic
        automatically matched to d1meyg_
        1. region a:8-35 [146936] picpiclink
      62. 2emz picpic
        automatically matched to d1meyg_
        1. region a:8-35 [146937] picpiclink
      63. 2en3 picpic
        automatically matched to d1meyg_
        1. region a:8-35 [146941] picpiclink
      64. 2ene picpic
        automatically matched to d1meyg_
        1. region a:8-35 [146946] picpiclink
      65. 2enh picpic
        automatically matched to d1meyg_
        1. region a:8-35 [146948] picpiclink
      66. 2eoo picpic
        automatically matched to d1meyg_
        1. region a:8-35 [146958] picpiclink
      67. 2eow picpic
        automatically matched to d1meyg_
        1. region a:8-35 [146963] picpiclink
      68. 2ep0 picpic
        automatically matched to d1meyg_
        1. region a:8-35 [146966] picpiclink
      69. 2yrj picpic
        automatically matched to d1meyg_
        1. region a:8-35 [153743] picpiclink
      70. 2ytd picpic
        automatically matched to d1meyg_
        1. region a:8-35 [153760] picpiclink
      71. 2yth picpic
        automatically matched to d1meyg_
        1. region a:8-35 [153764] picpiclink
      72. 2ytk picpic
        automatically matched to d1meyg_
        1. region a:8-35 [153767] picpiclink
      73. 2ytn picpic
        automatically matched to d1meyg_
        1. region a:8-35 [153769] picpiclink
      74. 2yto picpic
        automatically matched to d1meyg_
        1. region a:8-35 [153770] picpiclink
      75. 2emi picpic
        automatically matched to d1meyg_
        1. region a:8-35 [146919] picpiclink
      76. 2eml picpic
        automatically matched to d1meyg_
        1. region a:8-35 [146922] picpiclink
      77. 2eog picpic
        automatically matched to d1meyg_
        1. region a:6-33 [146952] picpiclink
      78. 2eox picpic
        automatically matched to d1meyg_
        1. region a:8-35 [146964] picpiclink
      79. 2yta picpic
        automatically matched to d1meyg_
        1. region a:134-161 [153758] picpiclink
      80. 2ytm picpic
        automatically matched to d1meyg_
        1. region a:8-35 [153768] picpiclink
      81. 2en4 picpic
        automatically matched to d1meyg_
        1. region a:8-35 [146942] picpiclink
      82. 2eoq picpic
        automatically matched to d1meyg_
        1. region a:8-35 [146960] picpiclink
      83. 2ytr picpic
        automatically matched to d1meyg_
        1. region a:8-35 [153773] picpiclink
      84. 2en2 picpic
        automatically matched to d1meyg_
        1. region a:8-34 [146940] picpiclink
      85. 2en7 picpic
        automatically matched to d1meyg_
        1. region a:8-35 [146944] picpiclink
      86. 2eon picpic
        automatically matched to d1meyg_
        1. region a:8-35 [146957] picpiclink
      87. 2ytb picpic
        automatically matched to d1meyg_
        1. region a:192-218 [153759] picpiclink
  2. Zinc finger with an artificial beta-turn [58861]
    original sequence taken from the third zinc finger domain of the human transcriptional repressor protein yy1
    1. Synthetic, based on Homo sapiens sequence [58862] (1)
      1. 1znm picpic
        1. chain a [46433] picpiclink
    2. Homo sapiens [TaxId: 9606] [161317] (4)
      1. 2ent picpic
        automatically matched to d1znma_
        1. region a:351-377 [146949] picpiclink
      2. 2ep3 picpic
        automatically matched to d1znma_
        1. region a:18-37 [146969] picpiclink
      3. 2eq3 picpic
        automatically matched to d1znma_
        1. region a:714-733 [146983] picpiclink
      4. 2ysp picpic
        automatically matched to d1znma_
        1. region a:18-37 [153752] picpiclink
  3. FSD-EY [64669]
    1. Synthetic [64670] (1)
      1. 1fme picpic
        1. chain a [59878] picpiclink
  4. TATA box-binding zinc finger, TATAZF [64671]
    1. Mouse (Mus musculus), Zif268 based [TaxId: 10090] [64672] (2)
      1. 1g2f picpic
        clone 6
        1. chain c [60222] picpiclink
        2. chain f [60223] picpiclink
      2. 1g2d picpic
        clone 2
        1. chain c [60220] picpiclink
        2. chain f [60221] picpiclink
  5. E6-binding zinc finger, different constructs [111544]
    1. Synthetic [111545] (2)
      1. 1rik picpic
        1. chain a [104952] picpiclink
      2. 1rim picpic
        1. chain a [104953] picpiclink
    2. Homo sapiens [TaxId: 9606] [161318] (1)
      1. 2en9 picpic
        automatically matched to d1rika_
        1. region a:13-39 [146945] picpiclink
  6. AART, designed six-finger protein [144340]
    1. synthetic [144341] (2)
      1. 2i13 picpic
        1. region a:31-184 [136964] picpiclink
      2. 2i13 picpic
        automatically matched to 2I13 A:31-184
        1. region b:31-178 [136965] picpiclink
  7. HIV REV-targetting Znf29 [161319]
    1. synthetic [161320] (2)
      1. 2ab3 picpic
        1. region a:1-29 [146045] picpiclink
      2. 2ab7 picpic
        automatically matched to 2AB3 A:1-29
        1. region a:1-28 [146046] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk