Structural Classification of Proteins
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Family: ML domain

implicated in lipid recognition, particularly in the recognition of pathogen related products

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: Immunoglobulin-like beta-sandwich [48725]
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. Superfamily: E set domains [81296]
    "Early" Ig-like fold families possibly related to the immunoglobulin and/or fibronectin type III superfamilies
    link to SUPERFAMILY database - Superfamily
  5. Family: ML domain [81287]
    implicated in lipid recognition, particularly in the recognition of pathogen related products

Protein Domains:

  1. Epididymal secretory protein E1 (Niemann-Pick C2 protein) [81964]
    a cholesterol binding protein
    1. Cow (Bos taurus) [TaxId: 9913] [81965] (4)
      1. 1nep picpic
        complexed with nag, po4
        1. chain a [80440] picpiclink
      2. 2hka picpic
        automatically matched to d1nepa_
        complexed with act, c3s, gol, nag, so4
        1. region a:1-130 [147298] picpiclink
      3. 2hka picpic
        automatically matched to d1nepa_
        complexed with act, c3s, gol, nag, so4
        1. region b:1-130 [147299] picpiclink
      4. 2hka picpic
        automatically matched to d1nepa_
        complexed with act, c3s, gol, nag, so4
        1. region c:1-130 [147300] picpiclink
  2. Major mite allergen [49256]
    contains additional N-terminal strand
    1. House-dust mite (Dermatophagoides farinae), Der f 2 [TaxId: 6954] [49257] (8)
      SQ Q00855 18-146
      1. 1xwv picpic
        complexed with pe3, xpe
        1. chain a [116134] picpiclink
        2. chain b [116135] picpiclink
      2. 2f08 picpic
        automatically matched to d1ahk__
        complexed with p4c
        1. region a:1-129 [132656] picpiclink
      3. 2f08 picpic
        automatically matched to d1ahk__
        complexed with p4c
        1. region b:1-129 [132657] picpiclink
      4. 2f08 picpic
        automatically matched to d1ahk__
        complexed with p4c
        1. region c:1-129 [132658] picpiclink
      5. 2f08 picpic
        automatically matched to d1ahk__
        complexed with p4c
        1. region d:1-129 [132659] picpiclink
      6. 1wrf picpic
        automatically matched to d1ahk__
        1. region a:1-129 [121195] picpiclink
      7. 1ahm picpic
        1. chain a [21944] picpiclink
      8. 1ahk picpic
        1. chain a [21945] picpiclink
    2. House-dust mite (Dermatophagoides pteronyssinus), Der p 2 [TaxId: 6956] [49258] (2)
      1. 1ktj picpic
        mutant
        1. chain a [72974] picpiclink
        2. chain b [72975] picpiclink
      2. 1a9v picpic
        mutant
        1. chain a [21946] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk