Structural Classification of Proteins

Family: Retinol binding protein-like

: barrel, closed; n=8, S=12, meander

Lineage:

Root: scop
Class: All beta proteins [48724]
Fold: Lipocalins [50813]
barrel, closed or opened; n=8, S=12; meander
Superfamily: Lipocalins [50814]
bind hydrophobic ligands in their interior
uperfamily
Family: Retinol binding protein-like [50815]
barrel, closed; n=8, S=12, meander

Protein Domains:

Retinol binding protein [50816]
1. Cow (Bos taurus) [TaxId: 9913] [50817] (13)
  1. 1kt7
    complexed with rtl
    1. chain a [84467]
  2. 1kt6
    complexed with rtl
    1. chain a [84466]
  3. 1kt3
    complexed with rtl
    1. chain a [84463]
  4. 1kt4
    complexed with rtl
    1. chain a [84464]
  5. 1kt5
    complexed with rtl
    1. chain a [84465]
  6. 1jyd
    complexed with gol
    1. chain a [84255]
  7. 1hbq
    1. chain a [27078]
  8. 1jyj
    complexed with gol; mutant
    1. chain a [84256]
  9. 1hbp
    complexed with rtl
    1. chain a [27079]
  10. 1erb
    complexed with etr
    1. chain a [27080]
  11. 1fen
    complexed with aze
    1. chain a [27081]
  12. 1fel
    complexed with fen
    1. chain a [27082]
  13. 1fem
    complexed with rea
    1. chain a [27083]
2. Pig (Sus scrofa domestica) [TaxId: 9823] [50818] (1)
  1. 1aqb
    complexed with cd, rtl
    1. chain a [27084]
3. Human (Homo sapiens) [TaxId: 9606] [50819] (4)
  1. 1rbp
    complexed with rtl
    1. chain a [27085]
  2. 1brp
    complexed with rtl
    1. chain a [27086]
  3. 1brq
    1. chain a [27087]
  4. 1qab
    complexed with rtl
    1. chain e [27088]
    2. chain f [27089]
4. Chicken (Gallus gallus) [TaxId: 9031] [50820] (1)
  1. 1rlb
    complexed with rea
    1. chain e [27090]
    2. chain f [27091]
5. Chicken (Gallus gallus), plasma isoform [TaxId: 9031] [69297] (1)
  1. 1iiu
    complexed with cd, rtl
    1. chain a [66151]
Odorant-binding protein [50821]
C-termini swapping dimer
1. Cow (Bos taurus) [TaxId: 9913] [50822] (8)
  1. 1gt1
    complexed with 3ol, anc, prz
    1. chain a [90515]
    2. chain b [90516]
  2. 1gt3
    complexed with 3ol, dhm
    1. chain a [90517]
    2. chain b [90518]
  3. 1hn2
    complexed with 3ol, anc
    1. chain a [65890]
    2. chain b [65891]
  4. 1g85
    complexed with 3ol
    1. chain a [70159]
    2. chain b [70160]
  5. 1obp
    complexed with unx
    1. chain a [27092]
    2. chain b [27093]
  6. 1gt5
    complexed with bzq
    1. chain a [90521]
    2. chain b [90522]
  7. 1gt4
    complexed with una
    1. chain a [90519]
    2. chain b [90520]
  8. 1pbo
    complexed with ses
    1. chain a [27094]
    2. chain b [27095]
2. Pig (Sus scrofa) [TaxId: 9823] [50823] (9)
  1. 1dzk
    complexed with prz
    1. chain a [27096]
    2. chain b [27097]
  2. 1dzp
    complexed with bzq
    1. chain a [27098]
    2. chain b [27099]
  3. 1e00
    complexed with dhm
    1. chain a [27100]
    2. chain b [27101]
  4. 1dzj
    complexed with ses
    1. chain a [27102]
    2. chain b [27103]
  5. 1e06
    complexed with ipb
    1. chain a [27106]
    2. chain b [27107]
  6. 1e02
    complexed with una
    1. chain a [27108]
    2. chain b [27109]
  7. 1dzm
    complexed with bzm
    1. chain a [27104]
    2. chain b [27105]
  8. 1a3y
    1. chain a [27110]
    2. chain b [27111]
  9. 1hqp
    complexed with prz
    1. chain a [27112]
Lipocalin allergen [50824]
1. Cow (Bos taurus), bos d 2 [TaxId: 9913] [50825] (1)
  1. 1bj7
    1. chain a [27113]
2. Horse (Equus caballus), equ c 1 [TaxId: 9796] [50826] (1)
  1. 1ew3
    1. chain a [27114]
Salivary lipocalin [74996]
1. Pig (Sus scrofa) [TaxId: 9823] [74997] (1)
  1. 1gm6
    complexed with cd, gol, nag
    1. chain a [70272]
Aphrodisin, a sex pheromone [63805]
1. Golden hamster (Mesocricetus auratus) [TaxId: 10036] [63806] (1)
  1. 1e5p
    1. chain a [59272]
    2. chain b [59273]
    3. chain c [59274]
    4. chain d [59275]
beta-Lactoglobulin [50827]
1. Cow (Bos taurus) [TaxId: 9913] [50828] (26)
  SQ P02754
  1. 1beb
    complexed with so4
    1. chain a [27115]
    2. chain b [27116]
  2. 1qg5
    1. chain a [63323]
  3. 1uz2
    mutant
    1. chain x [108149]
  4. 1b8e
    1. chain a [59077]
  5. 2q2m
    automatically matched to d1bsoa_
    1. region a:1-152 [150011]
  6. 1bso
    complexed with brc; mutant
    1. chain a [27122]
  7. 2blg
    1. chain a [27120]
  8. 1bsq
    mutant
    1. chain a [27118]
  9. 1bsy
    1. chain a [27117]
  10. 2gj5
    automatically matched to d1bsqa_
    complexed with vd3
    1. region a:2-162 [147122]
  11. 3blg
    1. chain a [27119]
  12. 2q39
    automatically matched to d1bsoa_
    1. region a:1-152 [150030]
  13. 2q39
    automatically matched to d1bsoa_
    1. region b:205-352 [150031]
  14. 2r56
    automatically matched to d1bsqa_
    complexed with lmt
    1. region a:4-162 [151581]
  15. 2r56
    automatically matched to d1bsqa_
    complexed with lmt
    1. region b:4-162 [151582]
  16. 1gx9
    complexed with rea
    1. chain a [70685]
  17. 1b0o
    complexed with plm
    1. chain a [27121]
  18. 2q2p
    automatically matched to d1bsoa_
    1. region a:1-152 [150013]
  19. 1gx8
    complexed with rtl
    1. chain a [70684]
  20. 1gxa
    complexed with plm
    1. chain a [70686]
  21. 2akq
    automatically matched to d1bsoa_
    1. region a:5-160 [126927]
  22. 2akq
    automatically matched to d1bsoa_
    1. region b:5-160 [126928]
  23. 2akq
    automatically matched to d1bsoa_
    1. region c:5-160 [126929]
  24. 2akq
    automatically matched to d1bsoa_
    1. region d:5-160 [126930]
  25. 1dv9
    1. chain a [27123]
  26. 1cj5
    mutant
    1. chain a [27124]
2. Pig (Sus scrofa) [TaxId: 9823] [50829] (1)
  1. 1exs
    CASP4
    complexed with cry, na
    1. chain a [27125]
3. Reindeer (Rangifer tarandus) [TaxId: 9870] [141461] (6)
  SQ P02755 19-180
  1. 1yup
    1. region a:1-162 [124056]
  2. 1yup
    automatically matched to 1YUP A:1-162
    1. region b:3-160 [124057]
  3. 1yup
    automatically matched to 1YUP A:1-162
    1. region c:3-162 [124058]
  4. 1yup
    automatically matched to 1YUP A:1-162
    1. region d:3-160 [124059]
  5. 1yup
    automatically matched to 1YUP A:1-162
    1. region f:2-160 [124060]
  6. 1yup
    automatically matched to 1YUP A:1-162
    1. region g:3-162 [124061]
Retinoic acid-binding protein [50830]
1. Rat (Rattus norvegicus) [TaxId: 10116] [50831] (2)
  1. 1epb
    complexed with rea
    1. chain a [27126]
    2. chain b [27127]
  2. 1epa
    1. chain a [27128]
    2. chain b [27129]
Major urinary protein/alpha-2u-globulin [50832]
1. Mouse (Mus musculus) [TaxId: 10090] [50833] (19)
  1. 1znd
    automatically matched to d1df3a_
    complexed with cd, pe9
    1. region a:1-157 [125380]
  2. 1zng
    automatically matched to d1df3a_
    complexed with cd, he4
    1. region a:1-157 [125382]
  3. 1znk
    automatically matched to d1df3a_
    complexed with cd, f09
    1. region a:1-157 [125384]
  4. 1qy1
    complexed with cd, na, prz
    1. chain a [96568]
  5. 1znl
    automatically matched to d1df3a_
    complexed with cd, de1
    1. region a:1-157 [125385]
  6. 1qy2
    complexed with cd, ipz, na
    1. chain a [96569]
  7. 2ozq
    automatically matched to d1df3a_
    complexed with cd, na
    1. region a:1-157 [149118]
  8. 1qy0
    complexed with cd, gol, na
    1. chain a [96567]
  9. 2dm5
    automatically matched to d1df3a_
    complexed with cd, odi
    1. region a:1-157 [131566]
  10. 1yp6
    complexed with cd, cl, prz; mutant
    1. region a:1-157 [123822]
  11. 1jv4
    complexed with cd, tzl
    1. chain a [67343]
  12. 1i05
    complexed with cd, ltl
    1. chain a [27130]
  13. 1yp7
    automatically matched to 1YP6 A:1-157
    complexed with cd; mutant
    1. region a:1-157 [123823]
  14. 1zne
    automatically matched to d1df3a_
    complexed with cd, he2
    1. region a:1-157 [125381]
  15. 1znh
    automatically matched to d1df3a_
    complexed with cd, oc9
    1. region a:1-157 [125383]
  16. 1i06
    complexed with cd, tzl
    1. chain a [27131]
  17. 1i04
    1. chain a [27132]
  18. 1mup
    complexed with cd, tzl
    1. chain a [27133]
  19. 1df3
    1. chain a [27134]
2. Rat (Rattus norvegicus) [TaxId: 10116] [50834] (2)
  1. 2a2u
    CASP3
    1. chain a [27135]
    2. chain b [27136]
    3. chain c [27137]
    4. chain d [27138]
  2. 2a2g
    complexed with leo
    1. chain a [27139]
    2. chain b [27140]
    3. chain c [27141]
    4. chain d [27142]
Neutrophil gelatinase-associated lipocalin (NGAL) [50835]
1. Human (Homo sapiens) [TaxId: 9606] [50836] (13)
  1. 1x71
    automatically matched to d1l6ma_
    complexed with db1, fe; mutant
    1. region a:4-177 [121768]
  2. 1x71
    automatically matched to d1l6ma_
    complexed with db1, fe; mutant
    1. region b:4-177 [121769]
  3. 1x71
    automatically matched to d1l6ma_
    complexed with db1, fe; mutant
    1. region c:4-177 [121770]
  4. 1x89
    automatically matched to d1l6ma_
    complexed with cm1; mutant
    1. region a:4-177 [121799]
  5. 1x89
    automatically matched to d1l6ma_
    complexed with cm1; mutant
    1. region b:4-177 [121800]
  6. 1x89
    automatically matched to d1l6ma_
    complexed with cm1; mutant
    1. region c:5-177 [121801]
  7. 1x8u
    automatically matched to d1l6ma_
    complexed with cm2; mutant
    1. region a:4-177 [121807]
  8. 1x8u
    automatically matched to d1l6ma_
    complexed with cm2; mutant
    1. region b:6-177 [121808]
  9. 1x8u
    automatically matched to d1l6ma_
    complexed with cm2; mutant
    1. region c:5-177 [121809]
  10. 1l6m
    complexed with dbh, dbs, fe, so4; mutant
    1. chain a [84531]
    2. chain b [84532]
    3. chain c [84533]
  11. 1qqs
    complexed with man, nag, non
    1. chain a [27143]
  12. 1dfv
    complexed with nag, so4
    1. chain a [27144]
    2. chain b [27145]
  13. 1ngl
    1. chain a [27146]
Lipocalin q83 [89364]
activated expression by the myc oncogene
1. Common quail (Coturnix coturnix) [TaxId: 9091] [89365] (1)
  1. 1jzu
    mutant
    1. chain a [84271]
Complement protein C8gamma [74998]
1. Human (Homo sapiens) [TaxId: 9606] [74999] (2)
  1. 1lf7
    complexed with cit; mutant
    1. chain a [73878]
  2. 1iw2
    mutant
    1. chain a [71468]
Bilin-binding protein [50837]
1. Cabbage butterfly (Pieris brassicae) [TaxId: 7116] [50838] (6)
  1. 1kxo
    engineered variant diga16
    mutant
    1. chain a [84475]
  2. 1lke
    engineered variant diga16 in complex with digoxigenin
    complexed with dog; mutant
    1. chain a [84622]
  3. 1bbp
    complexed with blv
    1. chain a [27147]
    2. chain b [27148]
    3. chain c [27149]
    4. chain d [27150]
  4. 1n0s
    engineered variant flua in complex with fluorescein
    complexed with flu, so4
    1. chain a [91526]
    2. chain b [91527]
  5. 1lnm
    engineered variant diga16 in complex with digitoxigenin
    complexed with dtx; mutant
    1. chain a [84641]
  6. 1t0v
    mutant
    1. region a:1-174 [119099]
Alpha-crustacyanin [63807]
1. European lobster (Homarus gammarus) [TaxId: 6707] [63808] (7)
  1. 1i4u
    C1 subunit
    complexed with mpd, so4
    1. chain a [61732]
    2. chain b [61733]
  2. 1s2p
    C2 subunit
    complexed with mpd, sul
    1. chain a [98393]
    2. chain b [98394]
  3. 1h91
    A1 subunit
    complexed with mpd
    1. chain a [60805]
    2. chain b [60806]
  4. 1s44
    A1 subunit
    complexed with gol, mpd, sul
    1. chain a [98471]
    2. chain b [98472]
  5. 1obq
    1. chain a [86778]
    2. chain b [86779]
  6. 1obu
    1. chain a [86780]
    2. chain b [86781]
  7. 1gka
    A1/A2 dimer
    complexed with axt, d12, epe, trs
    1. chain a [70213]
    2. chain b [70214]
Outer membrane lipoprotein Blc [101861]
bacterial lipocalin
1. Escherichia coli [TaxId: 562] [101862] (1)
  1. 1qwd
    1. chain a [96471]
    2. chain b [96472]
Histamine binding protein [50839]
1. Brown ear tick (Rhipicephalus appendiculatus) [TaxId: 34631] [50840] (2)
  1. 1qft
    complexed with hsm
    1. chain a [27151]
    2. chain b [27152]
  2. 1qfv
    complexed with hsm
    1. chain a [27153]
    2. chain b [27154]
Nitrophorin 1 [50841]
1. Rhodnius prolixus [TaxId: 13249] [50842] (8)
  1. 1u17
    complexed with hem, imd, po4; mutant
    1. region a:2-185 [119415]
  2. 1u17
    automatically matched to 1U17 A:2-185
    complexed with hem, imd, po4; mutant
    1. region b:2-185 [119416]
  3. 1u18
    automatically matched to 1U17 A:2-185
    complexed with hem, hsm, po4; mutant
    1. region a:2-185 [119417]
  4. 1u18
    automatically matched to 1U17 A:2-185
    complexed with hem, hsm, po4; mutant
    1. region b:2-185 [119418]
  5. 1np1
    complexed with hem, hsm, po4
    1. chain a [27155]
    2. chain b [27156]
  6. 2np1
    complexed with 2hp, hem, nh4
    1. chain a [27157]
    2. chain b [27158]
  7. 3np1
    complexed with cyn, hem, po4
    1. chain a [27159]
    2. chain b [27160]
  8. 4np1
    complexed with hem, nmo, phs, po4
    1. chain a [27161]
    2. chain b [27162]
Nitrophorin 2 (prolixin-s) [50843]
1. Rhodnius prolixus [TaxId: 13249] [50844] (14)
  SQ Q26241
  1. 1pm1
    complexed with hem, imd; mutant
    1. chain x [104189]
  2. 2eu7
    automatically matched to d1euoa_
    complexed with hem, nh3; mutant
    1. region x:2-179 [132379]
  3. 2hys
    automatically matched to d1euoa_
    complexed with cyn, hem
    1. region a:0-179 [136905]
  4. 2all
    automatically matched to d1pm1x_
    complexed with hem; mutant
    1. region x:0-179 [126977]
  5. 2gtf
    automatically matched to d1euoa_
    complexed with hem, p1r
    1. region x:0-179 [135648]
  6. 2a3f
    automatically matched to d1euoa_
    complexed with hem
    1. region x:0-179 [126090]
  7. 2acp
    automatically matched to d1euoa_
    complexed with hem
    1. region x:0-179 [126563]
  8. 1t68
    automatically matched to d1euoa_
    complexed with hem, no
    1. region x:0-179 [119160]
  9. 1pee
    complexed with hem, imd
    1. chain a [104126]
  10. 2al0
    automatically matched to d1euoa_
    complexed with cit, hem
    1. region x:0-179 [126948]
  11. 2asn
    automatically matched to d1euoa_
    complexed with hem, imd; mutant
    1. region x:2-179 [127264]
  12. 2ah7
    automatically matched to d1euoa_
    complexed with hem
    1. region x:0-179 [126743]
  13. 2amm
    automatically matched to d1pm1x_
    complexed with hem; mutant
    1. region x:0-179 [127020]
  14. 1euo
    complexed with hem, nh3
    1. chain a [27163]
Nitrophorin 4 [50845]
1. Rhodnius prolixus [TaxId: 13249] [50846] (34)
  SQ Q94734 22-205
  1. 1x8q
    complexed with hem
    1. chain a [114966]
  2. 1x8p
    complexed with hem, nh3
    1. chain a [114965]
  3. 1ywa
    automatically matched to d1d2ua_
    complexed with cmo, hem, po4
    1. region a:1-184 [124140]
  4. 1ywb
    automatically matched to d1d2ua_
    complexed with hem, no, po4
    1. region a:1-184 [124141]
  5. 1x8o
    complexed with hem, no, po4
    1. chain a [114964]
  6. 1ywc
    automatically matched to d1d2ua_
    complexed with cmo, hem
    1. region a:1-184 [124142]
  7. 1sy1
    complexed with hem, nmo, po4; mutant
    1. chain a [106108]
  8. 2at0
    automatically matched to 3C76 X:1-184
    complexed with hem, no, po4; mutant
    1. region x:1-184 [146069]
  9. 1sxx
    complexed with hem, nmo, po4; mutant
    1. chain a [106105]
  10. 3c78
    automatically matched to d1d2ua_
    complexed with fdd, nh3
    1. region x:1-184 [156000]
  11. 2at8
    automatically matched to d1d2ua_
    complexed with fdd, no, po4
    1. region x:1-184 [127284]
  12. 1sy3
    complexed with hem, nmo, po4; mutant
    1. chain a [106110]
  13. 1sy2
    complexed with hem, nh4; mutant
    1. chain a [106109]
  14. 3c77
    automatically matched to d1d2ua_
    complexed with fde, nh3
    1. region x:1-184 [155999]
  15. 1koi
    complexed with hem, nmo
    1. chain a [68725]
  16. 1sxw
    complexed with hem, nmo, po4; mutant
    1. chain a [106104]
  17. 3c76
    complexed with hem, nh3; mutant
    1. region x:1-184 [155998]
  18. 1x8n
    complexed with hem, no
    1. chain a [114963]
  19. 1sxy
    complexed with hem, nh4; mutant
    1. chain a [106106]
  20. 1ywd
    automatically matched to d1d2ua_
    complexed with hem
    1. region a:1-184 [124143]
  21. 2ofm
    automatically matched to d1d2ua_
    complexed with po4
    1. region x:1-184 [148761]
  22. 2at5
    automatically matched to d1d2ua_
    complexed with fde, no, po4
    1. region x:1-184 [127281]
  23. 1sy0
    complexed with hem, nh4; mutant
    1. chain a [106107]
  24. 1d2u
    complexed with hem, nh3
    1. chain a [64773]
  25. 2at6
    automatically matched to d1d2ua_
    complexed with fde
    1. region x:1-184 [127282]
  26. 1ml7
    complexed with hev, pyz
    1. chain a [79281]
  27. 1ikj
    complexed with hem, imd
    1. chain a [66181]
  28. 1u0x
    complexed with hem, nh3, xe
    1. chain a [107569]
  29. 1sxu
    complexed with hem, imd; mutant
    1. chain a [106103]
  30. 1erx
    complexed with cit, hev, nmo
    1. chain a [27164]
  31. 1d3s
    complexed with hem
    1. chain a [27165]
  32. 1ike
    complexed with hem, hsm
    1. chain a [66180]
  33. 1np4
    complexed with hem, nh3
    1. chain a [27166]
  34. 1eqd
    complexed with cit, cyn, hev
    1. chain a [27167]
Von Ebner's gland protein (VEGP, tear lipocalin) [117265]
1. Human (Homo sapiens) [TaxId: 9606] [117266] (1)
  SQ P31025 30-168
  1. 1xki
    complexed with cl, zn; mutant
    1. chain a [115408]
Insecticyanin [141462]
1. Tobacco hornworm (Manduca sexta) [TaxId: 7130] [141463] (1)
  SQ P00305 1-189
  1. 1z24
    complexed with blv
    1. region a:1-189 [124369]
Hypothetical protein YxeF [159228]
1. Bacillus subtilis [TaxId: 1423] [159229] (1)
  SQ P54945 19-144
  1. 2joz
    1. region a:2-127 [148164]