Structural Classification of Proteins
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Superfamily: Coronavirus RNA-binding domain

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: Coronavirus RNA-binding domain [110303]
    coiled antiparallel beta-sheet of 5 strands, order 51324; complex topology, crossing loops
  4. Superfamily: Coronavirus RNA-binding domain [110304]
    link to SUPERFAMILY database - Superfamily

Families:

  1. Coronavirus RNA-binding domain [110305] (2)
    N-terminal part of Pfam 00937
    1. Nucleocapsid protein [110306]
      1. SARS coronavirus, (SARS-CoV) [TaxId: 227859] [110307] (1)
        SQ P59595 45-181
        1. 1ssk picpic
          1. chain a [105986] picpiclink
      2. Avian infectious bronchitis virus [TaxId: 11120] [141560] (8)
        SQ P32923 23-160! SQ P69596 29-160! SQ P69597 29-160
        different strains
        1. 2gec picpic
          1. region a:23-160 [135059] picpiclink
        2. 2gec picpic
          automatically matched to 2GEC A:23-160
          1. region b:23-160 [135060] picpiclink
        3. 2bxx picpic
          mutant
          1. region a:29-160 [129446] picpiclink
        4. 2bxx picpic
          automatically matched to 2BXX A:29-160
          mutant
          1. region b:29-160 [129447] picpiclink
        5. 2btl picpic
          mutant
          1. region a:29-160 [129154] picpiclink
        6. 2btl picpic
          automatically matched to 2BTL A:29-160
          mutant
          1. region b:29-160 [129155] picpiclink
        7. 2c86 picpic
          automatically matched to 2BXX A:29-160
          mutant
          1. region a:29-160 [130093] picpiclink
        8. 2c86 picpic
          automatically matched to 2BXX A:29-160
          mutant
          1. region b:29-160 [130094] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk