Structural Classification of Proteins
home mail help root up expand collapse

Family: Coronavirus RNA-binding domain

N-terminal part of Pfam 00937

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: Coronavirus RNA-binding domain [110303]
    coiled antiparallel beta-sheet of 5 strands, order 51324; complex topology, crossing loops
  4. Superfamily: Coronavirus RNA-binding domain [110304]
    link to SUPERFAMILY database - Superfamily
  5. Family: Coronavirus RNA-binding domain [110305]
    N-terminal part of Pfam 00937

Protein Domains:

  1. Nucleocapsid protein [110306]
    1. SARS coronavirus, (SARS-CoV) [TaxId: 227859] [110307] (1)
      SQ P59595 45-181
      1. 1ssk picpic
        1. chain a [105986] picpiclink
    2. Avian infectious bronchitis virus [TaxId: 11120] [141560] (8)
      SQ P32923 23-160! SQ P69596 29-160! SQ P69597 29-160
      different strains
      1. 2gec picpic
        1. region a:23-160 [135059] picpiclink
      2. 2gec picpic
        automatically matched to 2GEC A:23-160
        1. region b:23-160 [135060] picpiclink
      3. 2bxx picpic
        mutant
        1. region a:29-160 [129446] picpiclink
      4. 2bxx picpic
        automatically matched to 2BXX A:29-160
        mutant
        1. region b:29-160 [129447] picpiclink
      5. 2btl picpic
        mutant
        1. region a:29-160 [129154] picpiclink
      6. 2btl picpic
        automatically matched to 2BTL A:29-160
        mutant
        1. region b:29-160 [129155] picpiclink
      7. 2c86 picpic
        automatically matched to 2BXX A:29-160
        mutant
        1. region a:29-160 [130093] picpiclink
      8. 2c86 picpic
        automatically matched to 2BXX A:29-160
        mutant
        1. region b:29-160 [130094] picpiclink
Enter search key:
MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk