Structural Classification of Proteins
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Fold: C2 domain-like

sandwich; 8 strands in 2 sheets; greek-key

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: C2 domain-like [49561]
    sandwich; 8 strands in 2 sheets; greek-key

Superfamilies:

  1. C2 domain (Calcium/lipid-binding domain, CaLB) [49562] (2)
    two constituent families are related by circular permutation
    link to SUPERFAMILY database - Superfamily
    1. PLC-like (P variant) [49563] (12)
      1. PI-specific phospholipase C isozyme D1 (PLC-D1), C-terminal domain [49564]
        1. Rat (Rattus norvegicus) [TaxId: 10116] [49565] (10)
          1. 1qas picpicxrefxref
            1. region a:626-756 [23157] picpiclink
            2. region b:626-756 [23158] picpiclink
          2. 1djx picpicxrefxref
            complexed with act, ca, i3p; mutant
            1. region a:626-756 [23159] picpiclink
            2. region b:626-756 [23160] picpiclink
          3. 1djh picpicxrefxref
            complexed with act, ba; mutant
            1. region a:626-756 [23163] picpiclink
            2. region b:626-756 [23164] picpiclink
          4. 1djw picpicxrefxref
            complexed with act, ca, cip; mutant
            1. region a:626-756 [23161] picpiclink
            2. region b:626-756 [23162] picpiclink
          5. 1dji picpicxrefxref
            complexed with act, ca; mutant
            1. region a:626-756 [23165] picpiclink
            2. region b:626-756 [23166] picpiclink
          6. 1djg picpicxrefxref
            complexed with act, la; mutant
            1. region a:626-756 [23167] picpiclink
            2. region b:626-756 [23168] picpiclink
          7. 2isd picpicxrefxref
            complexed with act; mutant
            1. region a:626-756 [23169] picpiclink
            2. region b:626-756 [23170] picpiclink
          8. 1djy picpicxrefxref
            complexed with act, ca, i2p; mutant
            1. region a:626-756 [23173] picpiclink
            2. region b:626-756 [23174] picpiclink
          9. 1djz picpicxrefxref
            complexed with act, ca, ip2; mutant
            1. region a:626-756 [23175] picpiclink
            2. region b:626-756 [23176] picpiclink
          10. 1qat picpicxrefxref
            complexed with sm
            1. region a:626-756 [23171] picpiclink
            2. region b:626-756 [23172] picpiclink
      2. Domain from cytosolic phospholipase A2 [49566]
        1. Human (Homo sapiens) [TaxId: 9606] [49567] (3)
          1. 1rlw picpic
            complexed with ca, cd; mutant
            1. chain a [23177] picpiclink
          2. 1cjy picpicxref
            complexed with ca, mes
            1. region a:13-141 [23178] picpiclink
            2. region b:1015-1141 [23179] picpiclink
          3. 1bci picpic
            complexed with ca
            1. chain a [23180] picpiclink
      3. Pten tumor suppressor (Phoshphoinositide phosphatase), C-terminal domain [49568]
        1. Human (Homo sapiens) [TaxId: 9606] [49569] (1)
          1. 1d5r picpicxref
            1. region a:188-351 [23181] picpiclink
      4. Phoshoinositide 3-kinase (PI3K) [49570]
        1. Pig (Sus scrofa) [TaxId: 9823] [49571] (5)
          1. 1e7u picpicxrefxrefxref
            complexed with kwt; mutant
            1. region a:351-524 [23182] picpiclink
          2. 1e8x picpicxrefxrefxref
            complexed with atp, lu; mutant
            1. region a:357-522 [23183] picpiclink
          3. 1e7v picpicxrefxrefxref
            complexed with ly2; mutant
            1. region a:354-524 [23184] picpiclink
          4. 1e90 picpicxrefxrefxref
            complexed with myc; mutant
            1. region a:357-521 [23185] picpiclink
          5. 1e8w picpicxrefxrefxref
            complexed with que; mutant
            1. region a:352-524 [23186] picpiclink
        2. Human (Homo sapiens) [TaxId: 9606] [49572] (3)
          1. 1e8y picpicxrefxrefxref
            mutant
            1. region a:357-522 [23187] picpiclink
          2. 1e8z picpicxrefxrefxref
            complexed with stu; mutant
            1. region a:357-522 [23188] picpiclink
          3. 1he8 picpicxrefxrefxrefxref
            complexed with gnp, mg; mutant
            1. region a:353-524 [23189] picpiclink
      5. Domain from protein kinase C delta [49573]
        rudiment form lacking calcium-binding site
        1. Rat (Rattus norvegicus) [TaxId: 10116] [49574] (1)
          1. 1bdy picpic
            mutant
            1. chain a [23190] picpiclink
            2. chain b [23191] picpiclink
      6. Domain from protein kinase C epsilon [69196]
        Calcium-independent
        1. Rat (Rattus rattus) [TaxId: 10117] [69197] (1)
          1. 1gmi picpic
            complexed with mg
            1. chain a [65309] picpiclink
      7. E3 ubiquitin-protein ligase Itchy [141103]
        1. Human (Homo sapiens) [TaxId: 9606] [141104] (1)
          SQ Q96J02 13-145
          1. 2nq3 picpic
            complexed with cl
            1. region a:13-145 [138452] picpiclink
      8. Unc-13 homolog A [141105]
        1. Rat (Rattus norvegicus) [TaxId: 10116] [141106] (6)
          SQ Q62768 1-128! SQ Q62768 2-150
          1. 2cjt picpic
            complexed with edo, fmt
            1. region a:1-128 [130549] picpiclink
          2. 2cjt picpic
            automatically matched to 2CJT A:1-128
            complexed with edo, fmt
            1. region b:1-128 [130550] picpiclink
          3. 2cjt picpic
            automatically matched to 2CJT A:1-128
            complexed with edo, fmt
            1. region c:2-128 [130551] picpiclink
          4. 2cjt picpic
            automatically matched to 2CJT A:1-128
            complexed with edo, fmt
            1. region d:2-128 [130552] picpiclink
          5. 2cjs picpic
            complexed with edo, gol, zn; mutant
            1. region a:2-150 [130547] picpiclink
          6. 2cjs picpic
            automatically matched to 2CJS A:2-150
            complexed with edo, gol, zn; mutant
            1. region b:2-150 [130548] picpiclink
      9. Multiple C2 and transmembrane domain-containing protein 2, MCTP2 [158940]
        1. Human (Homo sapiens) [TaxId: 9606] [158941] (1)
          SQ Q6DN12 504-629
          1. 2ep6 picpic
            3rd C2 domain
            1. region a:92-217 [146970] picpiclink
      10. Fantom [158942]
        RPGR-interacting protein 1-like protein
        1. Human (Homo sapiens) [TaxId: 9606] [158943] (1)
          SQ Q68CZ1 596-737
          1. 2yrb picpic
            1st C2 domain
            1. region a:596-737 [153741] picpiclink
      11. Phospholipase C-beta-2 [158944]
        1. Human (Homo sapiens) [TaxId: 9606] [158945] (2)
          SQ Q00722 678-799
          1. 2zkm picpicxrefxrefxref
            automatically matched to 2FJU B:678-799
            complexed with ca
            1. region x:678-799 [154588] picpiclink
          2. 2fju picpicxrefxrefxrefxref
            complexed with ca, gsp, mg
            1. region b:678-799 [145171] picpiclink
    2. Synaptotagmin-like (S variant) [49575] (12)
      topologically similar to the C-terminal domain of PapD
      1. Synaptogamin I [49576]
        duplication: contains tandem repeat of two similar domains
        1. Rat (Rattus norvegicus) [TaxId: 10116] [49577] (7)
          SQ P21707 271-419 ! SQ P21707 271-419
          1. 1uow picpic
            complexed with act, ca, gol
            1. chain a [107975] picpiclink
          2. 1tjx picpic
            complexed with act, ca, gol
            1. chain a [112465] picpiclink
          3. 1tjm picpic
            complexed with gol, sr
            1. chain a [107047] picpiclink
          4. 1uov picpic
            complexed with ca, gol
            1. chain a [107974] picpiclink
          5. 1rsy picpic
            first C2 domain
            CASP1
            complexed with so4
            1. chain a [23192] picpiclink
          6. 1byn picpic
            first C2 domain
            complexed with kal
            1. chain a [23193] picpiclink
          7. 1k5w picpic
            second C2 domain
            complexed with ca
            1. chain a [68212] picpiclink
        2. Homo sapiens [TaxId: 9606] [158946] (2)
          1. 2r83 picpic
            automatically matched to d1byna_
            complexed with cl
            1. region a:271-393 [151670] picpiclink
          2. 2r83 picpic
            automatically matched to d1byna_
            complexed with cl
            1. region b:271-393 [151671] picpiclink
      2. Synaptotagmin III [109606]
        duplication: contains 2 C2 domains
        1. Rat (Rattus norvegicus) [TaxId: 10116] [109607] (1)
          SQ P40748 293-588
          1. 1dqv picpic
            1. region a:295-424 [23194] picpiclink
            2. region a:425-569 [23195] picpiclink
      3. Synaptotagmin IV [101562]
        duplication: contains 2 C2 domains
        1. Human (Homo sapiens) [TaxId: 9606] [101563] (1)
          1. 1ugk picpic
            1. chain a [99365] picpiclink
        2. Rat (Rattus norvegicus) [TaxId: 10116] [110115] (2)
          SQ P50232 288-425
          1. 1w15 picpic
            second C2 domain
            complexed with ca, cl, na
            1. chain a [109041] picpiclink
          2. 1w16 picpic
            second C2 domain
            complexed with cl, na
            1. chain a [109042] picpiclink
      4. Regulating synaptic membrane exocytosis protein, rim2 [101564]
        1. Human (Homo sapiens) [TaxId: 9606] [101565] (2)
          1. 2bwq picpic
            automatically matched to d1v27a_
            complexed with so4
            1. region a:729-853 [129380] picpiclink
          2. 1v27 picpic
            first C2 domain
            1. chain a [100262] picpiclink
      5. Piccolo [101566]
        1. Rat (Rattus norvegicus) [TaxId: 10116] [101567] (1)
          1. 1rh8 picpic
            first C2 domain
            1. chain a [97467] picpiclink
      6. C2 domain from protein kinase c (alpha) [49578]
        1. Rat (Rattus norvegicus) [TaxId: 10116] [49579] (1)
          1. 1dsy picpic
            1. chain a [23196] picpiclink
      7. C2 domain from protein kinase c (beta) [49580]
        1. Rat (Rattus norvegicus) [TaxId: 10116] [49581] (1)
          1. 1a25 picpic
            complexed with ca, pse
            1. chain a [23197] picpiclink
            2. chain b [23198] picpiclink
      8. C2b-domain of rabphilin [49582]
        1. Rat (Rattus norvegicus) [TaxId: 10116] [49583] (4)
          1. 2cm5 picpic
            automatically matched to d3rpba_
            complexed with ca
            1. region a:541-677 [130613] picpiclink
          2. 2cm6 picpic
            automatically matched to d3rpba_
            complexed with ca, po4
            1. region a:541-677 [130614] picpiclink
          3. 2cm6 picpic
            automatically matched to d3rpba_
            complexed with ca, po4
            1. region b:1541-1677 [130615] picpiclink
          4. 3rpb picpic
            1. chain a [23199] picpiclink
      9. C2 domain protein At1g63220 [117082]
        1. Thale cress (Arabidopsis thaliana) [TaxId: 3702] [117083] (1)
          SQ Q9C8S6 2-125
          1. 1wfj picpic
            Structural genomics target
            1. chain a [114584] picpiclink
      10. Synaptotagmin XIII [117084]
        1. Human (Homo sapiens) [TaxId: 9606] [117085] (1)
          SQ Q7L8C5 155-280
          1. 1wfm picpic
            Structural genomics target; 1st C2 domain (of 2)
            1. chain a [114587] picpiclink
  2. Periplasmic chaperone C-domain [49584] (1)
    link to SUPERFAMILY database - Superfamily
    1. Periplasmic chaperone C-domain [49585] (5)
      1. PapD [49586]
        1. Escherichia coli [TaxId: 562] [49587] (12)
          1. 2j2z picpicxrefxref
            automatically matched to d3dpa_2
            complexed with co, so4
            1. region a:125-217 [137975] picpiclink
          2. 1qpx picpicxref
            mutant
            1. region a:125-215 [23200] picpiclink
            2. region b:125-215 [23201] picpiclink
          3. 1n0l picpicxrefxref
            complexed with mse; mutant
            1. region a:125-215 [79745] picpiclink
            2. region c:125-215 [79748] picpiclink
          4. 2uy6 picpicxrefxref
            automatically matched to d3dpa_2
            mutant
            1. region a:125-217 [140026] picpiclink
          5. 1qpp picpicxref
            mutant
            1. region a:125-214 [23202] picpiclink
            2. region b:125-214 [23203] picpiclink
          6. 2j7l picpicxref
            automatically matched to d3dpa_2
            complexed with xc2
            1. region a:125-215 [138118] picpiclink
          7. 1pdk picpicxrefxref
            1. region a:125-215 [23204] picpiclink
          8. 2uy7 picpicxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d3dpa_2
            complexed with so4; mutant
            1. region a:125-217 [140028] picpiclink
          9. 2uy7 picpicxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d3dpa_2
            complexed with so4; mutant
            1. region c:125-217 [140030] picpiclink
          10. 2uy7 picpicxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d3dpa_2
            complexed with so4; mutant
            1. region e:125-217 [140032] picpiclink
          11. 2uy7 picpicxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d3dpa_2
            complexed with so4; mutant
            1. region g:125-217 [140034] picpiclink
          12. 3dpa picpicxref
            CA-atoms only
            1. region a:125-218 [23205] picpiclink
      2. FimC [49588]
        1. Escherichia coli [TaxId: 562] [49589] (6)
          1. 3bwu picpicxrefxref
            automatically matched to d1bf8a2
            complexed with edo, peg
            1. region c:122-205 [155700] picpiclink
          2. 1ze3 picpicxrefxrefxref
            automatically matched to d1bf8_2
            complexed with edo
            1. region c:122-205 [124975] picpiclink
          3. 1klf picpicxrefxref
            complexed with man
            1. region a:122-205 [72683] picpiclink
            2. region c:122-205 [72687] picpiclink
            3. region e:122-205 [72691] picpiclink
            4. region g:122-205 [72695] picpiclink
            5. region i:122-205 [72699] picpiclink
            6. region k:122-205 [72703] picpiclink
            7. region m:122-205 [72707] picpiclink
            8. region o:122-205 [72711] picpiclink
          4. 1kiu picpicxrefxref
            complexed with mma; mutant
            1. region a:122-205 [72524] picpiclink
            2. region c:122-205 [72528] picpiclink
            3. region e:122-205 [72532] picpiclink
            4. region g:122-205 [72536] picpiclink
            5. region i:122-205 [72540] picpiclink
            6. region k:122-205 [72544] picpiclink
            7. region m:122-205 [72548] picpiclink
            8. region o:122-205 [72552] picpiclink
          5. 1qun picpicxrefxref
            1. region a:122-205 [23206] picpiclink
            2. region c:122-205 [23207] picpiclink
            3. region e:122-205 [23208] picpiclink
            4. region g:122-205 [23209] picpiclink
            5. region i:122-205 [23210] picpiclink
            6. region k:122-205 [23211] picpiclink
            7. region m:122-205 [23212] picpiclink
            8. region o:122-205 [23213] picpiclink
          6. 1bf8 picpicxref
            1. region a:122-205 [23214] picpiclink
      3. SfaE [74881]
        1. Escherichia coli [TaxId: 562] [74882] (1)
          1. 1l4i picpicxref
            1. region a:121-205 [73565] picpiclink
            2. region b:121-206 [73567] picpiclink
      4. Caf1m [89221]
        chaperone of F1 capsule antigen Caf1
        1. Yersinia pestis [TaxId: 632] [89222] (9)
          1. 1p5v picpicxrefxref
            1. region a:148-233 [87813] picpiclink
          2. 1p5u picpicxrefxref
            mutant
            1. region a:148-234 [87809] picpiclink
          3. 1z9s picpicxrefxref
            automatically matched to d1p5ua2
            1. region a:148-234 [124769] picpiclink
          4. 2os7 picpicxrefxrefxrefxrefxrefxref
            automatically matched to d1p5ua2
            1. region a:148-233 [139279] picpiclink
          5. 2os7 picpicxrefxrefxrefxrefxrefxref
            automatically matched to d1p5ua2
            1. region b:148-233 [139281] picpiclink
          6. 2os7 picpicxrefxrefxrefxrefxrefxref
            automatically matched to d1p5ua2
            1. region c:148-233 [139283] picpiclink
          7. 2os7 picpicxrefxrefxrefxrefxrefxref
            automatically matched to d1p5ua2
            1. region d:148-232 [139285] picpiclink
          8. 2os7 picpicxrefxrefxrefxrefxrefxref
            automatically matched to d1p5ua2
            1. region e:148-232 [139287] picpiclink
          9. 2os7 picpicxrefxrefxrefxrefxrefxref
            automatically matched to d1p5ua2
            1. region f:148-233 [139289] picpiclink
      5. Periplasmic chaperone SafB [158947]
        1. Salmonella typhimurium [TaxId: 90371] [158948] (2)
          SQ Q8ZRK3 152-236
          1. 2co7 picpicxrefxref
            automatically matched to 2CO6 B:136-220
            complexed with so4; mutant
            1. region b:136-220 [145050] picpiclink
          2. 2co6 picpicxrefxref
            1. region b:136-220 [145048] picpiclink
  3. PHL pollen allergen [49590] (1)
    link to SUPERFAMILY database - Superfamily
    1. PHL pollen allergen [49591] (2)
      1. PHL P 2 [49592]
        1. Timothy grass (Phleum pratense) [TaxId: 15957] [49593] (3)
          1. 1who picpic
            1. chain a [23215] picpiclink
          2. 1whp picpic
            1. chain a [23216] picpiclink
          3. 1bmw picpic
            1. chain a [23217] picpiclink
      2. PHL P 1 C-terminal domain [82001]
        1. Timothy grass (Phleum pratense) [TaxId: 15957] [82002] (1)
          1. 1n10 picpicxref
            complexed with nag
            1. region a:1146-1240 [79774] picpiclink
            2. region b:2146-2240 [79776] picpiclink
  4. Rab geranylgeranyltransferase alpha-subunit, insert domain [49594] (1)
    link to SUPERFAMILY database - Superfamily
    1. Rab geranylgeranyltransferase alpha-subunit, insert domain [49595] (1)
      1. Rab geranylgeranyltransferase alpha-subunit, insert domain [49596]
        1. Rat (Rattus norvegicus) [TaxId: 10116] [49597] (2)
          1. 1dce picpicxrefxrefxref
            complexed with zn
            1. region a:242-350 [23218] picpiclink
            2. region c:242-350 [23219] picpiclink
          2. 1ltx picpicxrefxrefxrefxrefxref
            complexed with cl, far, zn2; mutant
            1. region a:244-350 [84712] picpiclink
  5. Smr-associated domain-like [158949] (1)
    1. Smr-associated domain [158950] (1)
      Pfam 09640; DUF2027
      1. Putative DNA mismatch repair protein BT2179 [158951]
        1. Bacteroides thetaiotaomicron [TaxId: 818] [158952] (1)
          SQ Q8A5Q9 81-227
          1. 2huh picpic
            complexed with mg
            1. region a:81-227 [147405] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk