Structural Classification of Proteins
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Superfamily: alpha-D-mannose-specific plant lectins

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: beta-Prism II [51109]
    consists of 3 4-stranded sheets; strands are perpendicular to the 3-fold axis
    duplication: consists of two domains of this fold
  4. Superfamily: alpha-D-mannose-specific plant lectins [51110]
    link to SUPERFAMILY database - Superfamily

Families:

  1. alpha-D-mannose-specific plant lectins [51111] (6)
    1. Lectin (agglutinin) [51112]
      1. Snowdrop (Galanthus nivalis) [TaxId: 4670] [51113] (3)
        1. 1jpc picpic
          complexed with man
          1. chain a [27986] picpiclink
        2. 1msa picpic
          complexed with mma
          1. chain a [27987] picpiclink
          2. chain b [27988] picpiclink
          3. chain c [27989] picpiclink
          4. chain d [27990] picpiclink
        3. 1niv picpic
          complexed with mdm
          1. chain a [27991] picpiclink
          2. chain c [27992] picpiclink
      2. Garlic (Allium sativum) [TaxId: 4682] [51114] (2)
        1. 1kj1 picpic
          complexed with man
          1. chain a [68638] picpiclink
          2. chain d [68639] picpiclink
          3. chain p [68640] picpiclink
          4. chain q [68641] picpiclink
        2. 1bwu picpic
          complexed with man
          1. chain a [27993] picpiclink
          2. chain d [27994] picpiclink
          3. chain p [27995] picpiclink
          4. chain q [27996] picpiclink
      3. Daffodil (Narcissus pseudonarcissus) [TaxId: 39639] [51115] (1)
        1. 1npl picpic
          complexed with man, pho
          1. chain a [27997] picpiclink
      4. Bluebell (Scilla campanulata) [TaxId: 81759] [51116] (1)
        1. 1b2p picpic
          1. chain a [27998] picpiclink
          2. chain b [27999] picpiclink
    2. Fetuin-binding protein Scafet precursor [51117]
      duplication: consists of two beta-prism II domains
      1. Bluebell (Scilla campanulata) [TaxId: 81759] [51118] (1)
        1. 1dlp picpic
          low resolution structure
          1. region a:1-115 [28000] picpiclink
          2. region a:116-235 [28001] picpiclink
          3. region b:1-113 [28002] picpiclink
          4. region b:123-235 [28003] picpiclink
          5. region c:1-115 [28004] picpiclink
          6. region c:116-236 [28005] picpiclink
          7. region d:1-114 [28006] picpiclink
          8. region d:123-235 [28007] picpiclink
          9. region e:1-115 [28008] picpiclink
          10. region e:116-235 [28009] picpiclink
          11. region f:1-111 [28010] picpiclink
          12. region f:124-235 [28011] picpiclink
    3. Gastrodianin (antifungal protein) [117304]
      1. Gastrodia elata [TaxId: 91201] [117305] (2)
        SQ Q9AXZ2 29-140 # different isoforms
        1. 1xd5 picpic
          complexed with so4
          1. chain a [115155] picpiclink
          2. chain b [115156] picpiclink
          3. chain c [115157] picpiclink
          4. chain d [115158] picpiclink
        2. 1xd6 picpic
          complexed with so4
          1. chain a [115159] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk