Structural Classification of Proteins
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Family: alpha-D-mannose-specific plant lectins

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: beta-Prism II [51109]
    consists of 3 4-stranded sheets; strands are perpendicular to the 3-fold axis
    duplication: consists of two domains of this fold
  4. Superfamily: alpha-D-mannose-specific plant lectins [51110]
    link to SUPERFAMILY database - Superfamily
  5. Family: alpha-D-mannose-specific plant lectins [51111]

Protein Domains:

  1. Lectin (agglutinin) [51112]
    1. Snowdrop (Galanthus nivalis) [TaxId: 4670] [51113] (3)
      1. 1jpc picpic
        complexed with man
        1. chain a [27986] picpiclink
      2. 1msa picpic
        complexed with mma
        1. chain a [27987] picpiclink
        2. chain b [27988] picpiclink
        3. chain c [27989] picpiclink
        4. chain d [27990] picpiclink
      3. 1niv picpic
        complexed with mdm
        1. chain a [27991] picpiclink
        2. chain c [27992] picpiclink
    2. Garlic (Allium sativum) [TaxId: 4682] [51114] (2)
      1. 1kj1 picpic
        complexed with man
        1. chain a [68638] picpiclink
        2. chain d [68639] picpiclink
        3. chain p [68640] picpiclink
        4. chain q [68641] picpiclink
      2. 1bwu picpic
        complexed with man
        1. chain a [27993] picpiclink
        2. chain d [27994] picpiclink
        3. chain p [27995] picpiclink
        4. chain q [27996] picpiclink
    3. Daffodil (Narcissus pseudonarcissus) [TaxId: 39639] [51115] (1)
      1. 1npl picpic
        complexed with man, pho
        1. chain a [27997] picpiclink
    4. Bluebell (Scilla campanulata) [TaxId: 81759] [51116] (1)
      1. 1b2p picpic
        1. chain a [27998] picpiclink
        2. chain b [27999] picpiclink
  2. Fetuin-binding protein Scafet precursor [51117]
    duplication: consists of two beta-prism II domains
    1. Bluebell (Scilla campanulata) [TaxId: 81759] [51118] (1)
      1. 1dlp picpic
        low resolution structure
        1. region a:1-115 [28000] picpiclink
        2. region a:116-235 [28001] picpiclink
        3. region b:1-113 [28002] picpiclink
        4. region b:123-235 [28003] picpiclink
        5. region c:1-115 [28004] picpiclink
        6. region c:116-236 [28005] picpiclink
        7. region d:1-114 [28006] picpiclink
        8. region d:123-235 [28007] picpiclink
        9. region e:1-115 [28008] picpiclink
        10. region e:116-235 [28009] picpiclink
        11. region f:1-111 [28010] picpiclink
        12. region f:124-235 [28011] picpiclink
  3. Gastrodianin (antifungal protein) [117304]
    1. Gastrodia elata [TaxId: 91201] [117305] (2)
      SQ Q9AXZ2 29-140 # different isoforms
      1. 1xd5 picpic
        complexed with so4
        1. chain a [115155] picpiclink
        2. chain b [115156] picpiclink
        3. chain c [115157] picpiclink
        4. chain d [115158] picpiclink
      2. 1xd6 picpic
        complexed with so4
        1. chain a [115159] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk