Fold: Single-stranded right-handed beta-helix

superhelix turns are made of parallel beta-strands and (short) turns

Lineage:

1. Root: scop
2. Class: All beta proteins [48724]
3. Fold: Single-stranded right-handed beta-helix [51125]
   superhelix turns are made of parallel beta-strands and (short) turns

Superfamilies:

1. beta-Roll [51120] (1)
   superhelix turns are made of two short strands each
   uperfamily
   1. Serralysin-like metalloprotease, C-terminal domain [51121] (4)
      duplication: halfturs of beta-helix are sequence and structural repeats; binds calcium ions between the turns
2. Pectin lyase-like [51126] (11)
   superhelix turns are made of 3 strands each
   uperfamily
   1. Pectate lyase-like [51127] (6)
   2. Pectin lyase [51133] (2)
   3. Galacturonase [51137] (7)
   4. Chondroitinase B [51144] (1)
   5. iota-carrageenase [69333] (1)
   6. Pectate transeliminase [101951] (1)
   7. Dextranase, catalytic domain [101954] (1)
   8. Pectin methylesterase [51147] (2)
   9. P22 tailspike protein [51150] (1)
   10. Virulence factor P.69 pertactin [51153] (1)
   11. Filamentous hemagglutinin FhaB, secretion domain [101957] (1)
3. Insect cysteine-rich antifreeze protein [51156] (1)
   superhelix turns are made of two short strands each
   uperfamily
   1. Insect cysteine-rich antifreeze protein [51157] (1)
4. Cell-division inhibitor MinC, C-terminal domain [63848] (1)
   superhelix turns are made of three short strands each
   uperfamily
   1. Cell-division inhibitor MinC, C-terminal domain [63849] (1)
5. Alpha subunit of glutamate synthase, C-terminal domain [69336] (1)
   uperfamily
   1. Alpha subunit of glutamate synthase, C-terminal domain [69337] (2)
6. C-terminal domain of adenylylcyclase associated protein [69340] (1)
   superhelix turns are made of two strands each
   uperfamily
   1. C-terminal domain of adenylylcyclase associated protein [69341] (2)
7. Stabilizer of iron transporter SufD [101960] (1)
   superhelix turns are made of two very long strands each
   uperfamily
   1. Stabilizer of iron transporter SufD [101961] (1)
8. Pentapeptide repeat-like [141571] (1)
   superhelix turns are made of four short strands each; duplication: the sequence pentapeptide repeats correspond to individual strands
   uperfamily
   1. Pentapeptide repeats [141572] (3)
      Pfam 00805 (covers eight repeats or two full superhelical turns)

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk