Structural Classification of Proteins
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Family: Pentapeptide repeats

Pfam 00805 (covers eight repeats or two full superhelical turns)

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: Single-stranded right-handed beta-helix [51125]
    superhelix turns are made of parallel beta-strands and (short) turns
  4. Superfamily: Pentapeptide repeat-like [141571]
    superhelix turns are made of four short strands each; duplication: the sequence pentapeptide repeats correspond to individual strands
    link to SUPERFAMILY database - Superfamily
  5. Family: Pentapeptide repeats [141572]
    Pfam 00805 (covers eight repeats or two full superhelical turns)

Protein Domains:

  1. Hypothetical protein Rv3361c (MT3469) [141573]
    1. Mycobacterium tuberculosis [TaxId: 1773] [141574] (8)
      SQ O50390 2-182
      1. 2bm5 picpic
        automatically matched to 2BM4 A:2-182
        complexed with so4
        1. region a:2-182 [128765] picpiclink
      2. 2bm5 picpic
        automatically matched to 2BM4 A:2-182
        complexed with so4
        1. region b:2-181 [128766] picpiclink
      3. 2bm4 picpic
        1. region a:2-182 [128763] picpiclink
      4. 2bm4 picpic
        automatically matched to 2BM4 A:2-182
        1. region b:3-182 [128764] picpiclink
      5. 2bm6 picpic
        automatically matched to 2BM4 A:2-182
        complexed with cs
        1. region a:3-181 [128767] picpiclink
      6. 2bm7 picpic
        automatically matched to 2BM4 A:2-182
        1. region a:3-181 [128768] picpiclink
      7. 2bm7 picpic
        automatically matched to 2BM4 A:2-182
        1. region b:3-182 [128769] picpiclink
      8. 2bm7 picpic
        automatically matched to 2BM4 A:2-182
        1. region c:4-182 [128770] picpiclink
  2. NP275-NP276 [141575]
    Two consecuitive ORFs in the same frame that maintain the sequence periodicity; probable single ORF disrupted by the nonsense mutation
    1. Nostoc punctiforme [TaxId: 272131] [141576] (3)
      1. 2j8k picpic
        'Fusion form' produced by the mutation of the intervening stop codon
        complexed with mes, so4; mutant
        1. region a:1-175 [138141] picpiclink
      2. 2j8i picpic
        'Truncated form', NP275 only
        complexed with cl
        1. region a:1-98 [138139] picpiclink
      3. 2j8i picpic
        automatically matched to 2J8I A:1-98
        complexed with cl
        1. region b:1-98 [138140] picpiclink
  3. Lumenal RFR-domain protein [141577]
    1. Cyanothece sp. atcc 51142 [TaxId: 43989] [141578] (2)
      1. 2f3l picpic
        1. region a:7-138 [132872] picpiclink
      2. 2g0y picpic
        automatically matched to 2F3L A:7-138
        complexed with ca
        1. region a:7-138 [134506] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk