Structural Classification of Proteins

Superfamily: Trimeric LpxA-like enzymes

: superhelical turns are made of three short strands; duplication: the sequence hexapeptide repeats correspond to individual strands
uperfamily

Lineage:

Root: scop
Class: All beta proteins [48724]
Fold: Single-stranded left-handed beta-helix [51160]
superhelix turns are made of parallel beta-strands and (short) turns
Superfamily: Trimeric LpxA-like enzymes [51161]
superhelical turns are made of three short strands; duplication: the sequence hexapeptide repeats correspond to individual strands
uperfamily

Families:

UDP N-acetylglucosamine acyltransferase [51162] (2)
1. UDP N-acetylglucosamine acyltransferase [51163]
  1. Escherichia coli, gene lpxA [TaxId: 562] [51164] (6)
    1. 2jf2
      automatically matched to d1lxa__
      complexed with edo, peg
      1. region a:1-262 [138289]
    2. 2qia
      automatically matched to d1lxaa_
      complexed with u20
      1. region a:1-262 [150804]
    3. 2aq9
      automatically matched to d1lxa__
      complexed with dms, po4
      1. region a:1-262 [127167]
    4. 2qiv
      automatically matched to d1lxaa_
      complexed with u21
      1. region x:1-262 [150814]
    5. 2jf3
      automatically matched to d1lxa__
      complexed with ud1
      1. region a:1-262 [138290]
    6. 1lxa
      mutant
      1. chain a [28052]
  2. Helicobacter pylori [TaxId: 210] [101964] (1)
    1. 1j2z
      complexed with so4, sog, tar
      1. chain a [90805]
Tetrahydrodipicolinate-N-succinlytransferase, THDP-succinlytransferase, DapD [51165] (1)
contains extra N-terminal 3-helical domain
1. Tetrahydrodipicolinate-N-succinlytransferase, THDP-succinlytransferase, DapD [51166]
  1. Mycobacterium bovis [TaxId: 1765] [51167] (5)
    1. 3tdt
      complexed with 26p, coa
      1. chain a [28053]
    2. 1kgq
      complexed with npi, sco
      1. chain a [72447]
    3. 2tdt
      complexed with coa, npi
      1. chain a [28054]
    4. 1tdt
      1. chain a [28055]
      2. chain b [28056]
      3. chain c [28057]
    5. 1kgt
      complexed with pml, sca
      1. chain a [72448]
Galactoside acetyltransferase-like [51168] (4)
1. Galactoside acetyltransferase [75028]
  1. Escherichia coli [TaxId: 562] [75029] (4)
    1. 1krr
      complexed with aco
      1. chain a [72899]
      2. chain b [72900]
      3. chain c [72901]
    2. 1kru
      complexed with coa, ipt
      1. chain a [72902]
      2. chain b [72903]
      3. chain c [72904]
    3. 1kqa
      complexed with coa
      1. chain a [72868]
      2. chain b [72869]
      3. chain c [72870]
    4. 1krv
      complexed with 147, coa
      1. chain a [72905]
      2. chain b [72906]
      3. chain c [72907]
2. Maltose O-acetyltransferase [89400]
  1. Escherichia coli [TaxId: 562] [89401] (1)
    1. 1ocx
      complexed with pbm
      1. chain a [86814]
      2. chain b [86815]
      3. chain c [86816]
3. Xenobiotic acetyltransferase [51169]
  1. Pseudomonas aeruginosa [TaxId: 287] [51170] (2)
    1. 1xat
      1. chain a [28059]
    2. 2xat
      complexed with clm, dca
      1. chain a [28058]
  2. Enterococcus faecium, VAT(D) [TaxId: 1352] [69344] (7)
    streptogramin A acetyltransferase
    1. 1mr7
      1. chain a [91430]
      2. chain b [91431]
      3. chain c [91432]
      4. chain x [91433]
      5. chain y [91434]
      6. chain z [91435]
    2. 1kk6
      1. chain a [68657]
      2. chain b [68658]
      3. chain c [68659]
    3. 1khr
      complexed with coa, vir
      1. chain a [68617]
      2. chain b [68618]
      3. chain c [68619]
      4. chain d [68620]
      5. chain e [68621]
      6. chain f [68622]
    4. 1kk4
      complexed with aco
      1. chain a [68645]
      2. chain b [68646]
      3. chain c [68647]
      4. chain d [68648]
      5. chain e [68649]
      6. chain f [68650]
    5. 1kk5
      1. chain a [68651]
      2. chain b [68652]
      3. chain c [68653]
      4. chain d [68654]
      5. chain e [68655]
      6. chain f [68656]
    6. 1mrl
      complexed with dol
      1. chain a [91442]
      2. chain b [91443]
      3. chain c [91444]
    7. 1mr9
      complexed with aco
      1. chain a [91436]
      2. chain b [91437]
      3. chain c [91438]
      4. chain x [91439]
      5. chain y [91440]
      6. chain z [91441]
GlmU C-terminal domain-like [51171] (4)
1. N-acetylglucosamine 1-phosphate uridyltransferase GlmU, C-terminal domain [51172]
  1. Escherichia coli [TaxId: 562] [51173] (9)
    1. 2oi6
      automatically matched to d1hv9a1
      complexed with co, coa, gp1, mg, so4, ud1
      1. region a:252-452 [139084]
    2. 2oi6
      automatically matched to d1hv9a1
      complexed with co, coa, gp1, mg, so4, ud1
      1. region b:252-452 [139086]
    3. 2oi5
      automatically matched to d1hv9a1
      complexed with aco, mg, so4, ud1
      1. region a:252-452 [139080]
    4. 2oi5
      automatically matched to d1hv9a1
      complexed with aco, mg, so4, ud1
      1. region b:252-452 [139082]
    5. 1hv9
      complexed with co, coa, ud1
      1. region a:252-452 [28060]
      2. region b:252-452 [28061]
    6. 2oi7
      automatically matched to d1hv9a1
      complexed with co, dca, gn1, mg, so4, ud1
      1. region a:252-452 [139088]
    7. 2oi7
      automatically matched to d1hv9a1
      complexed with co, dca, gn1, mg, so4, ud1
      1. region b:252-452 [139090]
    8. 1fxj
      truncated form after R331
      complexed with mes, so4
      1. region a:252-329 [28062]
      2. region b:252-326 [28063]
    9. 1fwy
      truncated form after R331
      complexed with edo, so4, ud1
      1. region a:252-328 [28064]
      2. region b:252-326 [28065]
  2. Streptococcus pneumoniae [TaxId: 1313] [63852] (5)
    1. 1g97
      complexed with mg, na, ud1
      1. region a:252-447 [60394]
    2. 1hm9
      complexed with aco, ca, ud1
      1. region a:252-459 [65866]
      2. region b:252-459 [65868]
    3. 1g95
      1. region a:252-452 [60391]
    4. 1hm0
      complexed with ca
      1. region a:252-447 [65858]
      2. region b:252-447 [65860]
    5. 1hm8
      complexed with aco, ca
      1. region a:252-459 [65862]
      2. region b:252-459 [65864]
2. Glucose-1-phosphate adenylyltransferase small subunit, C-terminal domain [141579]
  1. Potato (Solanum tuberosum) [TaxId: 4113] [141580] (12)
    SQ P23509 387-521
    1. 1yp2
      complexed with pmb, so4
      1. region a:317-451 [123798]
    2. 1yp2
      automatically matched to 1YP2 A:317-451
      complexed with pmb, so4
      1. region b:317-451 [123800]
    3. 1yp2
      automatically matched to 1YP2 A:317-451
      complexed with pmb, so4
      1. region c:317-451 [123802]
    4. 1yp2
      automatically matched to 1YP2 A:317-451
      complexed with pmb, so4
      1. region d:317-451 [123804]
    5. 1yp4
      automatically matched to 1YP2 A:317-451
      complexed with adp, adq, so4
      1. region a:317-451 [123814]
    6. 1yp4
      automatically matched to 1YP2 A:317-451
      complexed with adp, adq, so4
      1. region b:317-451 [123816]
    7. 1yp4
      automatically matched to 1YP2 A:317-451
      complexed with adp, adq, so4
      1. region c:317-451 [123818]
    8. 1yp4
      automatically matched to 1YP2 A:317-451
      complexed with adp, adq, so4
      1. region d:317-451 [123820]
    9. 1yp3
      automatically matched to 1YP2 A:317-451
      complexed with atp, so4
      1. region a:317-451 [123806]
    10. 1yp3
      automatically matched to 1YP2 A:317-451
      complexed with atp, so4
      1. region b:317-451 [123808]
    11. 1yp3
      automatically matched to 1YP2 A:317-451
      complexed with atp, so4
      1. region c:317-451 [123810]
    12. 1yp3
      automatically matched to 1YP2 A:317-451
      complexed with atp, so4
      1. region d:317-451 [123812]
3. UDP-glucose pyrophosphorylase 2 (UDPGP 2) [141581]
  1. Thale cress (Arabidopsis thaliana) [TaxId: 3702] [141582] (8)
    SQ Q9M9P3 384-469
    1. 2icy
      automatically matched to 1Z90 A:384-469
      complexed with dms, u5p, upg
      1. region a:384-466 [137257]
    2. 2icy
      automatically matched to 1Z90 A:384-469
      complexed with dms, u5p, upg
      1. region b:384-469 [137259]
    3. 2icx
      automatically matched to 1Z90 A:384-469
      complexed with dms, utp
      1. region a:384-469 [137253]
    4. 2icx
      automatically matched to 1Z90 A:384-469
      complexed with dms, utp
      1. region b:384-469 [137255]
    5. 1z90
      1. region a:384-469 [124732]
    6. 1z90
      automatically matched to 1Z90 A:384-469
      1. region b:384-468 [124734]
    7. 2q4j
      automatically matched to 1Z90 A:384-469
      1. region a:384-469 [139860]
    8. 2q4j
      automatically matched to 1Z90 A:384-469
      1. region b:384-468 [139862]
gamma-carbonic anhydrase-like [51174] (3)
archaeal hexapeptide repeat proteins
1. gamma-carbonic anhydrase [51175]
  1. Archaeon Methanosarcina thermophila [TaxId: 2210] [51176] (7)
    1. 1qre
      complexed with bct, ocn
      1. chain a [28066]
    2. 1qrf
      complexed with ocl, sul
      1. chain a [28067]
    3. 1qrg
      complexed with zno
      1. chain a [28068]
    4. 1qq0
      complexed with ocm
      1. chain a [28069]
    5. 1qrl
      complexed with bct, zn
      1. chain a [28070]
    6. 1qrm
      complexed with sul, zn
      1. chain a [28071]
    7. 1thj
      complexed with zn
      1. chain a [28072]
      2. chain b [28073]
      3. chain c [28074]
2. Ferripyochelin binding protein [101965]
  1. Archaeon Pyrococcus horikoshii [TaxId: 53953] [101966] (3)
    1. 1v3w
      complexed with ca, cl, egl, gol, zn
      1. chain a [100291]
    2. 2fko
      automatically matched to d1v3wa_
      complexed with edo, zn
      1. region a:1-173 [133664]
    3. 1v67
      complexed with bct, ca, zn
      1. chain a [100379]
3. Putative acetyltransferase/acyltransferase BC4754 [117308]
  1. Bacillus cereus [TaxId: 1396] [117309] (1)
    SQ Q816R4
    1. 1xhd
      Structural genomics target
      complexed with so4
      1. chain a [115295]
Serine acetyltransferase [110309] (2)
1. Serine acetyltransferase [110310]
  extra N-terminal all-alpha subdomain belongs to Pfam 06426
  1. Haemophilus influenzae [TaxId: 727] [110311] (4)
    SQ P43886 1-241
    1. 1ssq
      complexed with cys, mg; mutant
      1. chain a [105993]
      2. chain d [105994]
    2. 1sst
      complexed with coa
      1. chain a [105995]
      2. chain b [105996]
      3. chain c [105997]
    3. 1ssm
      1. chain a [105987]
      2. chain b [105988]
      3. chain c [105989]
      4. chain d [105990]
      5. chain e [105991]
      6. chain f [105992]
    4. 1s80
      Structural genomics target
      1. chain a [105358]
      2. chain b [105359]
      3. chain c [105360]
      4. chain d [105361]
      5. chain e [105362]
      6. chain f [105363]
  2. Escherichia coli [TaxId: 562] [110312] (1)
    SQ P05796
    1. 1t3d
      complexed with cys
      1. chain a [106345]
      2. chain b [106346]
      3. chain c [106347]
YdcK-like [141583] (1)
part of Pfam 00132
1. Hypothetical protein YdcK [141584]
  1. Salmonella enterica [TaxId: 28901] [141585] (1)
    SQ Q5PHU6 3-322
    1. 2f9c
      complexed with cs
      1. region a:3-322 [133158]
PglD-like [159280] (1)
contains extra N-terminal alpha/beta subdomain
1. Acetyltransferase PglD [159281]
  1. Campylobacter jejuni [TaxId: 197] [159282] (9)
    SQ Q0P9D1 3-197
    1. 3bsw
      automatically matched to 2NPO A:3-197
      complexed with cit
      1. region a:3-195 [155528]
    2. 3bfp
      automatically matched to 2NPO A:3-197
      complexed with flc
      1. region a:3-195 [155234]
    3. 3bsy
      automatically matched to 2NPO A:3-197
      complexed with aco
      1. region a:3-195 [155531]
    4. 3bsy
      automatically matched to 2NPO A:3-197
      complexed with aco
      1. region b:3-195 [155532]
    5. 3bsy
      automatically matched to 2NPO A:3-197
      complexed with aco
      1. region c:3-195 [155533]
    6. 2vhe
      automatically matched to 2NPO A:3-197
      complexed with coa, so4
      1. region a:3-195 [153054]
    7. 2vhe
      automatically matched to 2NPO A:3-197
      complexed with coa, so4
      1. region b:3-195 [153055]
    8. 3bss
      automatically matched to 2NPO A:3-197
      complexed with ud4
      1. region a:3-195 [155527]
    9. 2npo
      1. region a:3-197 [148338]