Structural Classification of Proteins
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Family: YML079-like

Pfam 06172; DUF985

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: Double-stranded beta-helix [51181]
    one turn of helix is made by two pairs of antiparallel strands linked with short turns
    has appearance of a sandwich of distinct architecture and jelly-roll topology
  4. Superfamily: RmlC-like cupins [51182]
    link to SUPERFAMILY database - Superfamily
  5. Family: YML079-like [117318]
    Pfam 06172; DUF985

Protein Domains:

  1. Hypothetical protein YML079W [117319]
    1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [117320] (2)
      SQ Q03629
      1. 1xe7 picpic
        structural genomics target
        complexed with acy, edo, gun
        1. chain a [115213] picpiclink
        2. chain b [115214] picpiclink
        3. chain c [115215] picpiclink
      2. 1xe8 picpic
        Structural genomics target
        complexed with ade, cit, gol
        1. chain a [115216] picpiclink
        2. chain b [115217] picpiclink
        3. chain c [115218] picpiclink
  2. Hypothetical protein Atu3615 [141605]
    1. Agrobacterium tumefaciens [TaxId: 358] [141606] (7)
      SQ Q8U9W0 4-143
      1. 1znp picpic
        1. region a:4-143 [125394] picpiclink
      2. 1znp picpic
        automatically matched to 1ZNP A:4-143
        1. region b:5-143 [125395] picpiclink
      3. 1znp picpic
        automatically matched to 1ZNP A:4-143
        1. region c:5-142 [125396] picpiclink
      4. 1znp picpic
        automatically matched to 1ZNP A:4-143
        1. region d:5-142 [125397] picpiclink
      5. 1znp picpic
        automatically matched to 1ZNP A:4-143
        1. region e:5-143 [125398] picpiclink
      6. 1znp picpic
        automatically matched to 1ZNP A:4-143
        1. region f:5-143 [125399] picpiclink
      7. 1znp picpic
        automatically matched to 1ZNP A:4-143
        1. region g:5-143 [125400] picpiclink
  3. Hypothetical protein SO0799 [141607]
    1. Shewanella oneidensis [TaxId: 70863] [141608] (10)
      SQ Q8EIN8 1-158
      1. 1yud picpic
        1. region a:1-158 [124046] picpiclink
      2. 1yud picpic
        automatically matched to 1YUD A:1-158
        1. region b:1-158 [124047] picpiclink
      3. 1yud picpic
        automatically matched to 1YUD A:1-158
        1. region c:1-158 [124048] picpiclink
      4. 1yud picpic
        automatically matched to 1YUD A:1-158
        1. region d:1-158 [124049] picpiclink
      5. 1yud picpic
        automatically matched to 1YUD A:1-158
        1. region e:1-158 [124050] picpiclink
      6. 1yud picpic
        automatically matched to 1YUD A:1-158
        1. region f:1-158 [124051] picpiclink
      7. 1yud picpic
        automatically matched to 1YUD A:1-158
        1. region g:1-158 [124052] picpiclink
      8. 1yud picpic
        automatically matched to 1YUD A:1-158
        1. region h:1-158 [124053] picpiclink
      9. 1yud picpic
        automatically matched to 1YUD A:1-158
        1. region i:1-158 [124054] picpiclink
      10. 1yud picpic
        automatically matched to 1YUD A:1-158
        1. region j:1-158 [124055] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk