Structural Classification of Proteins
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Superfamily: cAMP-binding domain-like

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: Double-stranded beta-helix [51181]
    one turn of helix is made by two pairs of antiparallel strands linked with short turns
    has appearance of a sandwich of distinct architecture and jelly-roll topology
  4. Superfamily: cAMP-binding domain-like [51206]
    link to SUPERFAMILY database - Superfamily

Families:

  1. CO-sensing protein CooA, N-terminal domain [51207] (1)
    heme-binding domain
    1. CO-sensing protein CooA, N-terminal domain [51208]
      1. Rhodospirillum rubrum [TaxId: 1085] [51209] (1) picpic
  2. Listeriolysin regulatory protein PrfA, N-terminal domain [89419] (1)
    1. Listeriolysin regulatory protein PrfA, N-terminal domain [89420]
      1. Bacteria (Listeria monocytogenes) [TaxId: 1639] [89421] (11) picpic
  3. cAMP-binding domain [51210] (14)
    Pfam 00027
    1. Catabolite gene activator protein, N-terminal domain [51211]
      1. Escherichia coli [TaxId: 562] [51212] (26) picpic
    2. CRP-like transcriptional regulator TM1171, N-terminal domain [101991]
      1. Thermotoga maritima [TaxId: 2336] [101992] (1) picpic
    3. Regulatory subunit of Protein kinase A [51213]
      duplication: consists of two similar domains
      1. Cow (Bos taurus) [TaxId: 9913] [51214] (4) picpic
        SQ P00514 109-376
      2. Rat (Rattus norvegicus) [TaxId: 10116] [63861] (1) picpic
    4. Regulatory domain of Epac2, domains 1 and 3 [82197]
      duplication: two homologous domains of this fold are separated in the sequence by a DEP domain
      1. Mouse (Mus musculus) [TaxId: 10090] [82198] (1) picpic
    5. HCN pacemaker channel [101993]
      potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel
      1. Mouse (Mus musculus) [TaxId: 10090] [101994] (5) picpic
    6. Putative ion channel CnbD [110321]
      1. Mesorhizobium loti [TaxId: 381] [110322] (4) picpic
        SQ Q98GN8 218-350 # mll3241
    7. Probable cyclic nucleotide-gated ion channel 6 [117323]
      1. Thale cress (Arabidopsis thaliana) [TaxId: 3702] [117324] (1) picpic
        SQ O82226 509-632
    8. Probable transcription regulator BT4300, N-terminal domain [141639]
      1. Bacteroides thetaiotaomicron [TaxId: 818] [141640] (1) picpic
        SQ Q89ZS6 1-147
    9. Transcriptional regulator TTHA1359, N-terminal domain [141641]
      1. Thermus thermophilus [TaxId: 274] [141642] (1) picpic
        SQ Q5SIL0 6-117
    10. Transcriptional regulator PG0396, N-terminal domain [141643]
      1. Porphyromonas gingivalis [TaxId: 837] [141644] (1) picpic
        SQ Q7MAW7 10-151
    11. Cyclic AMP receptor-like protein Vfr [159312]
      1. Pseudomonas aeruginosa [TaxId: 287] [159313] (1) picpic
        SQ P55222 9-142
    12. Chlorophenol reduction protein CprK [159314]
      1. Desulfitobacterium hafniense [TaxId: 49338] [159315] (7) picpic
        SQ Q18R04 3-147! SQ Q18R04 9-147
      2. Desulfitobacterium dehalogenans [TaxId: 36854] [159316] (2) picpic
        SQ Q9LAS2 19-147
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk