Structural Classification of Proteins

Superfamily: TRAP-like

: shorter variant of double-helix; assembles in large ring-like structures containing from 9 to 11 domains
uperfamily

Lineage:

Root: scop
Class: All beta proteins [48724]
Fold: Double-stranded beta-helix [51181]
one turn of helix is made by two pairs of antiparallel strands linked with short turns
has appearance of a sandwich of distinct architecture and jelly-roll topology
Superfamily: TRAP-like [51219]
shorter variant of double-helix; assembles in large ring-like structures containing from 9 to 11 domains
uperfamily

Families:

Trp RNA-binding attenuation protein (TRAP) [51220] (2)
oligomeric ring consists of 11 single-domain subunits
1. Trp RNA-binding attenuation protein (TRAP) [51221]
  1. Bacillus subtilis [TaxId: 1423] [51222] (1)
    1. 1wap
      1. chain a [28153]
      2. chain b [28154]
      3. chain c [28155]
      4. chain d [28156]
      5. chain e [28157]
      6. chain f [28158]
      7. chain g [28159]
      8. chain h [28160]
      9. chain i [28161]
      10. chain j [28162]
      11. chain k [28163]
      12. chain l [28164]
      13. chain m [28165]
      14. chain n [28166]
      15. chain o [28167]
      16. chain p [28168]
      17. chain q [28169]
      18. chain r [28170]
      19. chain s [28171]
      20. chain t [28172]
      21. chain u [28173]
      22. chain v [28174]
  2. Bacillus stearothermophilus [TaxId: 1422] [51223] (19)
    1. 1gtf
      complexed with trp
      1. chain a [70460]
      2. chain b [70461]
      3. chain c [70462]
      4. chain d [70463]
      5. chain e [70464]
      6. chain f [70465]
      7. chain g [70466]
      8. chain h [70467]
      9. chain i [70468]
      10. chain j [70469]
      11. chain k [70470]
      12. chain l [70471]
      13. chain m [70472]
      14. chain n [70473]
      15. chain o [70474]
      16. chain p [70475]
      17. chain q [70476]
      18. chain r [70477]
      19. chain s [70478]
      20. chain t [70479]
      21. chain u [70480]
      22. chain v [70481]
    2. 2ext
      automatically matched to d1c9sm_
      complexed with trp
      1. region a:7-69 [132563]
    3. 2ext
      automatically matched to d1c9sm_
      complexed with trp
      1. region b:7-69 [132564]
    4. 2ext
      automatically matched to d1c9sm_
      complexed with trp
      1. region c:7-69 [132565]
    5. 2zcz
      automatically matched to d1c9sm_
      complexed with trp; mutant
      1. region a:7-75 [154379]
    6. 2zcz
      automatically matched to d1c9sm_
      complexed with trp; mutant
      1. region b:7-73 [154380]
    7. 2zcz
      automatically matched to d1c9sm_
      complexed with trp; mutant
      1. region c:7-72 [154381]
    8. 2zcz
      automatically matched to d1c9sm_
      complexed with trp; mutant
      1. region d:7-75 [154382]
    9. 2zcz
      automatically matched to d1c9sm_
      complexed with trp; mutant
      1. region e:7-74 [154383]
    10. 2zcz
      automatically matched to d1c9sm_
      complexed with trp; mutant
      1. region f:7-72 [154384]
    11. 1c9s
      protein/RNA complex
      1. chain a [28175]
      2. chain b [28176]
      3. chain c [28177]
      4. chain d [28178]
      5. chain e [28179]
      6. chain f [28180]
      7. chain g [28181]
      8. chain h [28182]
      9. chain i [28183]
      10. chain j [28184]
      11. chain k [28185]
      12. chain l [28186]
      13. chain m [28187]
      14. chain n [28188]
      15. chain o [28189]
      16. chain p [28190]
      17. chain q [28191]
      18. chain r [28192]
      19. chain s [28193]
      20. chain t [28194]
      21. chain u [28195]
      22. chain v [28196]
    12. 1utv
      complexed with trp
      1. chain a [99971]
      2. chain b [99972]
      3. chain c [99973]
      4. chain d [99974]
      5. chain e [99975]
      6. chain f [99976]
      7. chain g [99977]
      8. chain h [99978]
      9. chain i [99979]
      10. chain j [99980]
      11. chain k [99981]
      12. chain l [99982]
      13. chain m [99983]
      14. chain n [99984]
      15. chain o [99985]
      16. chain p [99986]
      17. chain q [99987]
      18. chain r [99988]
      19. chain s [99989]
      20. chain t [99990]
      21. chain u [99991]
      22. chain v [99992]
    13. 1utf
      complexed with trp
      1. chain a [99940]
      2. chain b [99941]
      3. chain c [99942]
      4. chain d [99943]
      5. chain e [99944]
      6. chain f [99945]
      7. chain g [99946]
      8. chain h [99947]
      9. chain i [99948]
      10. chain j [99949]
      11. chain k [99950]
      12. chain l [99951]
      13. chain m [99952]
      14. chain n [99953]
      15. chain o [99954]
      16. chain p [99955]
      17. chain q [99956]
      18. chain r [99957]
      19. chain s [99958]
      20. chain t [99959]
      21. chain u [99960]
      22. chain v [99961]
    14. 1utd
      complexed with trp
      1. chain a [99918]
      2. chain b [99919]
      3. chain c [99920]
      4. chain d [99921]
      5. chain e [99922]
      6. chain f [99923]
      7. chain g [99924]
      8. chain h [99925]
      9. chain i [99926]
      10. chain j [99927]
      11. chain k [99928]
      12. chain l [99929]
      13. chain m [99930]
      14. chain n [99931]
      15. chain o [99932]
      16. chain p [99933]
      17. chain q [99934]
      18. chain r [99935]
      19. chain s [99936]
      20. chain t [99937]
      21. chain u [99938]
      22. chain v [99939]
    15. 2zd0
      automatically matched to d1c9sm_
      complexed with trp; mutant
      1. region a:7-69 [154385]
    16. 2zd0
      automatically matched to d1c9sm_
      complexed with trp; mutant
      1. region b:7-72 [154386]
    17. 2zd0
      automatically matched to d1c9sm_
      complexed with trp; mutant
      1. region c:7-72 [154387]
    18. 1gtn
      complexed with trp
      1. chain a [70507]
      2. chain b [70508]
      3. chain c [70509]
      4. chain d [70510]
      5. chain e [70511]
      6. chain f [70512]
      7. chain g [70513]
      8. chain h [70514]
      9. chain i [70515]
      10. chain j [70516]
      11. chain k [70517]
      12. chain l [70518]
      13. chain m [70519]
      14. chain n [70520]
      15. chain o [70521]
      16. chain p [70522]
      17. chain q [70523]
      18. chain r [70524]
      19. chain s [70525]
      20. chain t [70526]
      21. chain u [70527]
      22. chain v [70528]
    19. 1qaw
      1. chain a [28197]
      2. chain b [28198]
      3. chain c [28199]
      4. chain d [28200]
      5. chain e [28201]
      6. chain f [28202]
      7. chain g [28203]
      8. chain h [28204]
      9. chain i [28205]
      10. chain j [28206]
      11. chain k [28207]
PA3696/SPS0176-like [101995] (2)
duplication: there are three structural repeats per subunit; nine domains per ring-like trimer
1. Hypothetical protein SPyM3_0169 (SPyM18_0222, SPS0176) [101996]
  1. Streptococcus pyogenes [TaxId: 1314] [101997] (1)
    1. 1pg6
      structural genomics; NESG target DR2
      complexed with ca
      1. chain a [94673]
2. Hypothetical protein PA3696 [141645]
  1. Pseudomonas aeruginosa [TaxId: 287] [141646] (6)
    SQ Q9HXU4 5-244
    1. 1yox
      1. region a:5-244 [123789]
    2. 1yox
      automatically matched to 1YOX A:5-244
      1. region b:5-237 [123790]
    3. 1yox
      automatically matched to 1YOX A:5-244
      1. region c:5-237 [123791]
    4. 1yox
      automatically matched to 1YOX A:5-244
      1. region d:5-237 [123792]
    5. 1yox
      automatically matched to 1YOX A:5-244
      1. region e:5-237 [123793]
    6. 1yox
      automatically matched to 1YOX A:5-244
      1. region f:5-242 [123794]