Structural Classification of Proteins

Family: Trp RNA-binding attenuation protein (TRAP)

: oligomeric ring consists of 11 single-domain subunits

Lineage:

Root: scop
Class: All beta proteins [48724]
Fold: Double-stranded beta-helix [51181]
one turn of helix is made by two pairs of antiparallel strands linked with short turns
has appearance of a sandwich of distinct architecture and jelly-roll topology
Superfamily: TRAP-like [51219]
shorter variant of double-helix; assembles in large ring-like structures containing from 9 to 11 domains
uperfamily
Family: Trp RNA-binding attenuation protein (TRAP) [51220]
oligomeric ring consists of 11 single-domain subunits

Protein Domains:

Trp RNA-binding attenuation protein (TRAP) [51221]
1. Bacillus subtilis [TaxId: 1423] [51222] (1)
  1. 1wap
    1. chain a [28153]
    2. chain b [28154]
    3. chain c [28155]
    4. chain d [28156]
    5. chain e [28157]
    6. chain f [28158]
    7. chain g [28159]
    8. chain h [28160]
    9. chain i [28161]
    10. chain j [28162]
    11. chain k [28163]
    12. chain l [28164]
    13. chain m [28165]
    14. chain n [28166]
    15. chain o [28167]
    16. chain p [28168]
    17. chain q [28169]
    18. chain r [28170]
    19. chain s [28171]
    20. chain t [28172]
    21. chain u [28173]
    22. chain v [28174]
2. Bacillus stearothermophilus [TaxId: 1422] [51223] (19)
  1. 1gtf
    complexed with trp
    1. chain a [70460]
    2. chain b [70461]
    3. chain c [70462]
    4. chain d [70463]
    5. chain e [70464]
    6. chain f [70465]
    7. chain g [70466]
    8. chain h [70467]
    9. chain i [70468]
    10. chain j [70469]
    11. chain k [70470]
    12. chain l [70471]
    13. chain m [70472]
    14. chain n [70473]
    15. chain o [70474]
    16. chain p [70475]
    17. chain q [70476]
    18. chain r [70477]
    19. chain s [70478]
    20. chain t [70479]
    21. chain u [70480]
    22. chain v [70481]
  2. 2ext
    automatically matched to d1c9sm_
    complexed with trp
    1. region a:7-69 [132563]
  3. 2ext
    automatically matched to d1c9sm_
    complexed with trp
    1. region b:7-69 [132564]
  4. 2ext
    automatically matched to d1c9sm_
    complexed with trp
    1. region c:7-69 [132565]
  5. 2zcz
    automatically matched to d1c9sm_
    complexed with trp; mutant
    1. region a:7-75 [154379]
  6. 2zcz
    automatically matched to d1c9sm_
    complexed with trp; mutant
    1. region b:7-73 [154380]
  7. 2zcz
    automatically matched to d1c9sm_
    complexed with trp; mutant
    1. region c:7-72 [154381]
  8. 2zcz
    automatically matched to d1c9sm_
    complexed with trp; mutant
    1. region d:7-75 [154382]
  9. 2zcz
    automatically matched to d1c9sm_
    complexed with trp; mutant
    1. region e:7-74 [154383]
  10. 2zcz
    automatically matched to d1c9sm_
    complexed with trp; mutant
    1. region f:7-72 [154384]
  11. 1c9s
    protein/RNA complex
    1. chain a [28175]
    2. chain b [28176]
    3. chain c [28177]
    4. chain d [28178]
    5. chain e [28179]
    6. chain f [28180]
    7. chain g [28181]
    8. chain h [28182]
    9. chain i [28183]
    10. chain j [28184]
    11. chain k [28185]
    12. chain l [28186]
    13. chain m [28187]
    14. chain n [28188]
    15. chain o [28189]
    16. chain p [28190]
    17. chain q [28191]
    18. chain r [28192]
    19. chain s [28193]
    20. chain t [28194]
    21. chain u [28195]
    22. chain v [28196]
  12. 1utv
    complexed with trp
    1. chain a [99971]
    2. chain b [99972]
    3. chain c [99973]
    4. chain d [99974]
    5. chain e [99975]
    6. chain f [99976]
    7. chain g [99977]
    8. chain h [99978]
    9. chain i [99979]
    10. chain j [99980]
    11. chain k [99981]
    12. chain l [99982]
    13. chain m [99983]
    14. chain n [99984]
    15. chain o [99985]
    16. chain p [99986]
    17. chain q [99987]
    18. chain r [99988]
    19. chain s [99989]
    20. chain t [99990]
    21. chain u [99991]
    22. chain v [99992]
  13. 1utf
    complexed with trp
    1. chain a [99940]
    2. chain b [99941]
    3. chain c [99942]
    4. chain d [99943]
    5. chain e [99944]
    6. chain f [99945]
    7. chain g [99946]
    8. chain h [99947]
    9. chain i [99948]
    10. chain j [99949]
    11. chain k [99950]
    12. chain l [99951]
    13. chain m [99952]
    14. chain n [99953]
    15. chain o [99954]
    16. chain p [99955]
    17. chain q [99956]
    18. chain r [99957]
    19. chain s [99958]
    20. chain t [99959]
    21. chain u [99960]
    22. chain v [99961]
  14. 1utd
    complexed with trp
    1. chain a [99918]
    2. chain b [99919]
    3. chain c [99920]
    4. chain d [99921]
    5. chain e [99922]
    6. chain f [99923]
    7. chain g [99924]
    8. chain h [99925]
    9. chain i [99926]
    10. chain j [99927]
    11. chain k [99928]
    12. chain l [99929]
    13. chain m [99930]
    14. chain n [99931]
    15. chain o [99932]
    16. chain p [99933]
    17. chain q [99934]
    18. chain r [99935]
    19. chain s [99936]
    20. chain t [99937]
    21. chain u [99938]
    22. chain v [99939]
  15. 2zd0
    automatically matched to d1c9sm_
    complexed with trp; mutant
    1. region a:7-69 [154385]
  16. 2zd0
    automatically matched to d1c9sm_
    complexed with trp; mutant
    1. region b:7-72 [154386]
  17. 2zd0
    automatically matched to d1c9sm_
    complexed with trp; mutant
    1. region c:7-72 [154387]
  18. 1gtn
    complexed with trp
    1. chain a [70507]
    2. chain b [70508]
    3. chain c [70509]
    4. chain d [70510]
    5. chain e [70511]
    6. chain f [70512]
    7. chain g [70513]
    8. chain h [70514]
    9. chain i [70515]
    10. chain j [70516]
    11. chain k [70517]
    12. chain l [70518]
    13. chain m [70519]
    14. chain n [70520]
    15. chain o [70521]
    16. chain p [70522]
    17. chain q [70523]
    18. chain r [70524]
    19. chain s [70525]
    20. chain t [70526]
    21. chain u [70527]
    22. chain v [70528]
  19. 1qaw
    1. chain a [28197]
    2. chain b [28198]
    3. chain c [28199]
    4. chain d [28200]
    5. chain e [28201]
    6. chain f [28202]
    7. chain g [28203]
    8. chain h [28204]
    9. chain i [28205]
    10. chain j [28206]
    11. chain k [28207]