Structural Classification of Proteins
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Superfamily: Phage fibre proteins

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: Triple-stranded beta-helix [69348]
    (homo)trimer; each chain donates 3 beta-strands per turn of the helix
  4. Superfamily: Phage fibre proteins [69349]
    link to SUPERFAMILY database - Superfamily

Families:

  1. Middle part of short tail fibre protein gp12 [69350] (1)
    1. Middle part of short tail fibre protein gp12 [88691]
      includes the N-terminal cap (sub)domain
      1. Bacteriophage T4 [TaxId: 10665] [88692] (1)
        1. 1h6w picpicxref
          1. region a:246-327 [83060] picpiclink
  2. Tail-associated lysozyme gp5, C-terminal domain [69353] (1)
    1. Tail-associated lysozyme gp5, C-terminal domain [69354]
      1. Bacteriophage T4 [TaxId: 10665] [69355] (1)
        1. 1k28 picpicxrefxrefxref
          dN: 761-312; dI: 424-506
          complexed with k, po4
          1. region a:362-584 [68050] picpiclink
  3. Endo-alpha-sialidase [117325] (1)
    1. Endo-alpha-sialidase [117326]
      1. Bacteriophage K1F [TaxId: 344021] [117327] (2)
        SQ Q04830 245-909
        1. 1v0e picpicxref
          complexed with po4
          1. region a:761-910 [113467] picpiclink
          2. region b:761-910 [113469] picpiclink
          3. region c:761-910 [113471] picpiclink
          4. region d:761-910 [113473] picpiclink
          5. region e:761-910 [113475] picpiclink
          6. region f:761-910 [113477] picpiclink
        2. 1v0f picpicxref
          complexed with po4, sia, slb
          1. region a:761-910 [113479] picpiclink
          2. region b:761-910 [113481] picpiclink
          3. region c:761-910 [113483] picpiclink
          4. region d:761-910 [113485] picpiclink
          5. region e:761-910 [113487] picpiclink
          6. region f:761-910 [113489] picpiclink
  4. Lactophage receptor-binding protein domain [141647] (2)
    1. Baseplate protein (bpp), N-terminal domain [141648]
      includes extra N-terminal trimerization helix
      1. Lactococcus phage tp901-1 [TaxId: 35345] [141649] (3)
        SQ Q9G096 17-62
        1. 2f0c picpicxrefxrefxref
          complexed with gol
          1. region a:17-62 [132666] picpiclink
        2. 2f0c picpicxrefxrefxref
          automatically matched to 2F0C A:17-62
          complexed with gol
          1. region b:17-62 [132668] picpiclink
        3. 2f0c picpicxrefxrefxref
          automatically matched to 2F0C A:17-62
          complexed with gol
          1. region c:17-62 [132670] picpiclink
    2. Receptor binding protein, rbp, middle domain [141650]
      1. Lactococcus lactis phage p2 [TaxId: 100641] [141651] (6)
        SQ Q71AW2 141-161
        1. 1zru picpicxrefxrefxrefxrefxrefxref
          complexed with gol
          1. region a:141-161 [125561] picpiclink
        2. 1zru picpicxrefxrefxrefxrefxrefxref
          automatically matched to 1ZRU A:141-161
          complexed with gol
          1. region b:141-161 [125564] picpiclink
        3. 1zru picpicxrefxrefxrefxrefxrefxref
          automatically matched to 1ZRU A:141-161
          complexed with gol
          1. region c:141-161 [125567] picpiclink
        4. 2bsd picpicxrefxrefxrefxrefxrefxref
          automatically matched to 1ZRU A:141-161
          1. region a:141-161 [129082] picpiclink
        5. 2bsd picpicxrefxrefxrefxrefxrefxref
          automatically matched to 1ZRU A:141-161
          1. region b:141-161 [129085] picpiclink
        6. 2bsd picpicxrefxrefxrefxrefxrefxref
          automatically matched to 1ZRU A:141-161
          1. region c:141-161 [129088] picpiclink
  5. HylP-like [159317] (1)
    Pfam 07212
    1. Phage-associated hyaluronidase, HylP1 [159318]
      1. Streptococcus pyogenes [TaxId: 1314] [159319] (6)
        SQ Q9A0M7 7-336! SQ Q9A0M7 7-337
        1. 2c3f picpic
          complexed with na
          1. region a:7-336 [146370] picpiclink
        2. 2yvv picpic
          complexed with lbt
          1. region a:7-337 [153780] picpiclink
        3. 2yw0 picpic
          automatically matched to 2YVV A:7-337
          1. region a:7-337 [153793] picpiclink
        4. 2yx2 picpic
          automatically matched to 2YVV A:7-337
          1. region a:7-337 [153816] picpiclink
        5. 2dp5 picpic
          1. region a:7-337 [146552] picpiclink
        6. 2pk1 picpic
          automatically matched to 2YVV A:7-337
          complexed with asc
          1. region a:7-337 [149585] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk