Structural Classification of Proteins
Fold: Barrel-sandwich hybrid
sandwich of half-barrel shaped beta-sheets
Lineage:
Root:
scop
Class:
All beta proteins
[48724]
Fold:
Barrel-sandwich hybrid
[51229]
sandwich of half-barrel shaped beta-sheets
Superfamilies:
Single hybrid motif
[51230] (1)
7 to 8 strands in 2 beta-sheets
uperfamily
Biotinyl/lipoyl-carrier proteins and domains
[51231] (13)
Biotinyl domain of acetyl-CoA carboxylase [51232]
Escherichia coli
[TaxId: 562]
[51233] (4)
1bdo
complexed with btn
chain a
[28214]
1a6x
chain a
[28215]
3bdo
chain a
[28217]
2bdo
complexed with btn
chain a
[28216]
Biotin carboxyl carrier domain of transcarboxylase (TC 1.3S) [51234]
Propionibacterium freudenreichii, subsp. shermanii
[TaxId: 1744]
[51235] (3)
1dd2
chain a
[28218]
1dcz
chain a
[28219]
1o78
mutant
chain a
[81130]
Protein H of glycine cleavage system [51236]
Pea (Pisum sativum)
[TaxId: 3888]
[51237] (3)
1hpc
complexed with lpa
chain a
[28221]
chain b
[28222]
1htp
complexed with oss
chain a
[28220]
1dxm
complexed with red
chain a
[28223]
chain b
[28224]
Thermus thermophilus
[TaxId: 274]
[102003] (1)
1onl
chain a
[93362]
chain b
[93363]
chain c
[93364]
Lipoyl domain of dihydrolipoamide acetyltransferase [51238]
component of the pyruvate dehydrogenase complex
Bacillus stearothermophilus
[TaxId: 1422]
[51239] (2)
1lac
chain a
[28225]
1lab
chain a
[28226]
Azotobacter vinelandii
[TaxId: 354]
[51240] (2)
1iyu
chain a
[28227]
1iyv
chain a
[28228]
Escherichia coli
[TaxId: 562]
[51241] (1)
1qjo
chain a
[28229]
Neisseria meningitidis
[TaxId: 487]
[69364] (1)
1gjx
chain a
[65222]
Human (Homo sapiens)
[TaxId: 9606]
[51242] (4)
1y8o
automatically matched to d1fyc__
complexed with adp, k, lpa, mg
region b:128-229
[122759]
1y8p
automatically matched to d1fyc__
complexed with atp, k, lpa, mg
region b:128-229
[122760]
1y8n
automatically matched to d1fyc__
complexed with k, lpa
region b:128-229
[122758]
1fyc
chain a
[28230]
Lipoyl domain of the 2-oxoglutarate dehydrogenase complex [51243]
Azotobacter vinelandii
[TaxId: 354]
[51244] (2)
1ghj
chain a
[28232]
1ghk
chain a
[28231]
Escherichia coli
[TaxId: 562]
[51245] (1)
1pmr
chain a
[28233]
Homo sapiens
[TaxId: 9606]
[159320] (3)
2pnr
automatically matched to d1pmra_
complexed with red
region c:135-195
[149700]
2pnr
automatically matched to d1pmra_
complexed with red
region g:135-195
[149705]
2q8i
automatically matched to d1pmra_
complexed with gol, k, rdc, red
region b:135-195
[150128]
Lipoyl domain of the mitochondrial branched-chain alpha-ketoacid dehydrogenase [69365]
Human (Homo sapiens)
[TaxId: 9606]
[69366] (2)
1k8o
chain a
[68315]
1k8m
chain a
[68314]
Rudiment single hybrid motif
[51246] (2)
uperfamily
BC C-terminal domain-like
[51247] (7)
probable rudiment form of the biotinyl-carrier domain
Biotin carboxylase (BC), C-domain [51248]
subunit of acetyl-CoA and pyruvate carboxylases
Escherichia coli
[TaxId: 562]
[51249] (13)
2j9g
automatically matched to d1bncb1
complexed with adp, anp, mg, so4
region a:331-446
[147937]
2j9g
automatically matched to d1bncb1
complexed with adp, anp, mg, so4
region b:331-446
[147940]
2gpw
automatically matched to d1bncb1
mutant
region a:331-447
[135497]
2gpw
automatically matched to d1bncb1
mutant
region b:331-447
[135500]
2gpw
automatically matched to d1bncb1
mutant
region c:331-447
[135503]
2gpw
automatically matched to d1bncb1
mutant
region d:331-447
[135506]
1dv1
complexed with po4
region a:331-446
[28234]
region b:331-448
[28235]
2vr1
automatically matched to d1bncb1
complexed with atf, cl
region a:331-446
[153489]
2vr1
automatically matched to d1bncb1
complexed with atf, cl
region b:331-446
[153492]
1bnc
complexed with po4
region a:331-446
[28236]
region b:331-448
[28237]
1dv2
complexed with atp; mutant
region a:331-447
[28238]
region b:331-447
[28239]
2gps
automatically matched to d1bncb1
mutant
region a:331-446
[135487]
2gps
automatically matched to d1bncb1
mutant
region b:331-446
[135490]
Aquifex aeolicus
[TaxId: 63363]
[102004] (1)
1ulz
mutant
region a:329-451
[99575]
Glycinamide ribonucleotide synthetase (GAR-syn), C-domain [51250]
Escherichia coli
[TaxId: 562]
[51251] (1)
1gso
mutant
region a:328-426
[28240]
Thermotoga maritima
[TaxId: 2336]
[110323] (1)
SQ
Q9X0X7
1vkz
Structural genomics target
complexed with edo; mutant
region a:314-399
[108698]
region b:314-399
[108701]
N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), C-domain [51252]
Escherichia coli
[TaxId: 562]
[51253] (6)
3etj
automatically matched to d1b6ra1
complexed with adp, cl, mg, pi; mutant
region a:277-355
[158204]
3etj
automatically matched to d1b6ra1
complexed with adp, cl, mg, pi; mutant
region b:277-355
[158207]
3eth
automatically matched to d1b6ra1
complexed with atp, mg; mutant
region a:277-355
[158198]
3eth
automatically matched to d1b6ra1
complexed with atp, mg; mutant
region b:277-355
[158201]
1b6r
region a:277-355
[28241]
1b6s
region a:277-355
[28242]
region b:277-355
[28243]
region c:277-355
[28244]
region d:277-355
[28245]
Glycinamide ribonucleotide transformylase PurT, C-domain [51254]
Escherichia coli
[TaxId: 562]
[51255] (7)
1kjq
complexed with adp, cl, edo, mg, mpo, na
region a:319-392
[72616]
region b:319-392
[72619]
1kj9
complexed with atp, cl, edo, mg, mpo, na
region a:319-392
[72589]
region b:319-392
[72592]
1kj8
complexed with atp, cl, edo, gar, mg, mpo, na
region a:319-392
[72583]
region b:319-392
[72586]
1kji
complexed with acp, cl, edo, mg, mpo, na
region a:319-392
[72601]
region b:319-392
[72604]
1kjj
complexed with ags, cl, mg, mpo, na
region a:319-392
[72607]
region b:319-392
[72610]
1ez1
complexed with act, anp, gar, mg, mpo, na
region a:319-392
[28248]
region b:319-392
[28249]
1eyz
complexed with anp, cl, mg, mpo, na
region a:319-392
[28246]
region b:319-392
[28247]
Acetyl-CoA carboxylase, BC-C subdomain [117328]
Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]
[117329] (2)
SQ
Q00955
13-566
1w96
complexed with s1a
region a:451-566
[114397]
region b:451-566
[114400]
region c:451-549
[114403]
1w93
region a:451-566
[114394]
Cytochrome f, small domain
[51256] (5)
Cytochrome f, small domain [51257]
Turnip (Brassica rapa)
[TaxId: 3711]
[51258] (2)
1hcz
complexed with hem
region a:168-230
[28250]
1ctm
complexed with hem
region a:168-230
[28251]
Chlamydomonas reinhardtii
[TaxId: 3055]
[51259] (6)
1e2w
complexed with hec; mutant
region a:169-232
[28252]
region b:169-232
[28253]
1e2v
complexed with act, hec; mutant
region a:169-232
[28254]
region b:469-532
[28255]
region c:769-832
[28256]
1cfm
complexed with hem
region a:169-232
[28257]
region b:169-232
[28258]
region c:169-232
[28259]
1ewh
complexed with ace, hem
region a:169-232
[28260]
region b:169-232
[28261]
region c:169-232
[28262]
1e2z
complexed with hec; mutant
region a:169-232
[28263]
region b:169-232
[28264]
region c:169-232
[28265]
1q90
complexed with bcr, cl1, fes, hem, lfa, lmg, sqd, tds; mutant
region a:169-232
[96239]
Phormidium laminosum
[TaxId: 32059]
[51260] (1)
1ci3
complexed with hem, zn
region m:170-231
[28266]
Mastigocladus laminosus
[TaxId: 83541]
[102005] (1)
1vf5
complexed with bcr, cla, fes, hem, opc, pl9, tds
region c:170-231
[100581]
region p:170-231
[100592]
Anabaena sp., strain PCC 7120
[TaxId: 1167]
[159321] (1)
SQ
Q93SW9
214-279
1tu2
complexed with cu, hec
region b:170-235
[144381]
Duplicated hybrid motif
[51261] (2)
half-barrel sheet of 8 strands sandwiched with two 3-stranded sheets
uperfamily
Glucose permease-like
[51262] (3)
Glucose permease IIa domain, IIa-glc [51263]
Bacillus subtilis
[TaxId: 1423]
[51264] (2)
1gpr
chain a
[28267]
1ax3
chain a
[28268]
Mycoplasma capricolum
[TaxId: 2095]
[51265] (1)
2gpr
chain a
[28269]
Glucose-specific factor III (glsIII) [51266]
synonym: enzyme IIa-glc
Escherichia coli
[TaxId: 562]
[51267] (10)
2f3g
chain a
[28270]
chain b
[28271]
1f3g
chain a
[28272]
1f3z
complexed with zn
chain a
[28273]
1gla
complexed with gol
chain f
[28274]
1glb
complexed with adp, gol
chain f
[28275]
1glc
complexed with adp, g3p, mg, zn
chain f
[28276]
1gld
complexed with adp, g3p, mn
chain f
[28277]
1gle
complexed with adp, g3p, zn
chain f
[28278]
1ggr
complexed with po3
chain a
[28279]
1o2f
complexed with po3
chain a
[86593]
Peptidoglycan hydrolase LytM
[102006] (1)
Peptidase family M23; contains extra N-terminal, non-conserved beta-sheet subdomain
Peptidoglycan hydrolase LytM [102007]
Staphylococcus aureus
[TaxId: 1280]
[102008] (1)
1qwy
complexed with zn
chain a
[96509]
Ribosomal L27 protein-like
[110324] (2)
rudiment single hybrid fold with a permuted topology
uperfamily
Ribosomal L27 protein
[110325] (3)
Pfam 01016
Ribosomal protein L27 [110326]
Thermus thermophilus
[TaxId: 274]
[110327] (2)
SQ
P84123
1v8q
Structural genomics target
complexed with dtt
chain a
[108428]
chain b
[108429]
chain c
[108430]
chain d
[108431]
1vsa
automatically matched to d1v8qa_
region u:20-85
[120518]
Escherichia coli
[TaxId: 562]
[159322] (29)
SQ
P0A7L8
1-84
2gyc
automatically matched to 2AW4 W:1-84
region u:1-84
[145274]
2gya
automatically matched to 2AW4 W:1-84
region u:1-84
[145252]
2qam
automatically matched to 2AW4 W:1-84
complexed with mg, nmy, zn
region w:6-84
[150263]
2qao
automatically matched to 2AW4 W:1-84
complexed with mg, nmy, zn
region w:6-84
[150316]
2i2t
automatically matched to 2AW4 W:1-84
complexed with mg, zn
region w:6-84
[145459]
2i2v
automatically matched to 2AW4 W:1-84
complexed with mg, zn
region w:6-84
[145501]
2qbe
automatically matched to 2AW4 W:1-84
complexed with mg, zn
region w:6-84
[150483]
2qbg
automatically matched to 2AW4 W:1-84
complexed with mg, zn
region w:6-84
[150537]
2qoz
automatically matched to 2AW4 W:1-84
complexed with mg, nmy, zn
region w:6-84
[151139]
2qp1
automatically matched to 2AW4 W:1-84
complexed with mg, nmy, zn
region w:6-84
[151192]
3df2
automatically matched to 2AW4 W:1-84
complexed with mg, zn
region w:6-84
[157652]
3df4
automatically matched to 2AW4 W:1-84
complexed with mg, zn
region w:6-84
[157706]
2qba
automatically matched to 2AW4 W:1-84
complexed with lll, mg, zn
region w:6-84
[150376]
2qbc
automatically matched to 2AW4 W:1-84
complexed with lll, mg, zn
region w:6-84
[150429]
2qbi
automatically matched to 2AW4 W:1-84
complexed with lll, mg, zn
region w:6-84
[150591]
2qbk
automatically matched to 2AW4 W:1-84
complexed with lll, mg, zn
region w:6-84
[150645]
2qov
automatically matched to 2AW4 W:1-84
complexed with mg, zn
region w:6-84
[151033]
2qox
automatically matched to 2AW4 W:1-84
complexed with mg, zn
region w:6-84
[151086]
1vs6
automatically matched to 2AW4 W:1-84
complexed with mg
region w:1-84
[144474]
1vs8
automatically matched to 2AW4 W:1-84
complexed with mg
region w:1-84
[144515]
2aw4
Representative structure
complexed with mg
region w:1-84
[144883]
2awb
automatically matched to 2AW4 W:1-84
complexed with mg
region w:1-84
[144924]
2z4l
automatically matched to 2AW4 W:1-84
complexed with mg, par, zn
region w:6-84
[154101]
2z4n
automatically matched to 2AW4 W:1-84
complexed with mg, par, zn
region w:6-84
[154155]
2vhm
automatically matched to 2AW4 W:1-84
complexed with mg; mutant
region w:1-84
[153086]
2vhn
automatically matched to 2AW4 W:1-84
complexed with mg
region w:1-84
[153118]
2rdo
automatically matched to 2AW4 W:1-84
region w:1-84
[151963]
2j28
automatically matched to 2AW4 W:1-84
complexed with mg
region w:1-84
[145640]
3bbx
automatically matched to 2AW4 W:1-84
complexed with mg
region w:1-84
[155120]
Deinococcus radiodurans
[TaxId: 1299]
[159323] (11)
SQ
Q9RY65
2-85
2zjr
Representative structure
complexed with mg
region t:2-85
[154573]
1xbp
automatically matched to 2ZJR T:2-85
complexed with mul
region u:2-85
[145886]
1y69
automatically matched to 2ZJR T:2-85
mutant
region u:2-85
[145907]
2zjq
automatically matched to 2ZJR T:2-85
region t:2-85
[154544]
3cf5
automatically matched to 2ZJR T:2-85
complexed with mg, txx
region t:2-85
[156560]
2zjp
automatically matched to 2ZJR T:2-85
complexed with mg, nsh, zn
region t:2-85
[154512]
3dll
automatically matched to 2ZJR T:2-85
complexed with mg, zld, zn
region t:2-85
[157797]
1yl3
automatically matched to 2ZJR T:2-85
region 3:2-85
[144692]
2b66
automatically matched to 2ZJR T:2-85
region 0:2-85
[144955]
2b9n
automatically matched to 2ZJR T:2-85
region 0:2-85
[144968]
2b9p
automatically matched to 2ZJR T:2-85
region 0:2-85
[144977]
ECR1 N-terminal domain-like
[159324] (5)
ECR1 - Exosome complex RNA-binding protein 1
Ribosomal RNA-processing protein 40, RRP40 [159325]
Human (Homo sapiens)
[TaxId: 9606]
[159326] (1)
SQ
Q9NQT5
17-107
2nn6
mutant
region g:16-106
[148308]
Exosome component 1, EXOSC1 [159327]
3'-5' exoribonuclease CSL4 homolog
Human (Homo sapiens)
[TaxId: 9606]
[159328] (1)
SQ
Q9Y3B2
6-60
2nn6
mutant
region i:6-60
[148314]
Exosome complex RNA-binding protein 1, ECR1 [159329]
Archaeoglobus fulgidus
[TaxId: 2234]
[159330] (3)
SQ
O29758
2-52
2ba0
region a:2-52
[146097]
2ba0
automatically matched to 2BA0 A:2-52
region b:2-52
[146100]
2ba0
automatically matched to 2BA0 A:2-52
region c:2-52
[146103]
Sulfolobus solfataricus
[TaxId: 2287]
[159331] (2)
SQ
Q9UXC4
7-65
2je6
complexed with 1pe, cl, peg; mutant
region i:7-65
[147996]
2jea
automatically matched to 2JE6 I:7-65
complexed with 1pe; mutant
region i:7-65
[148013]
Ribosomal RNA-processing protein 4, RRP4 [159332]
Human (Homo sapiens)
[TaxId: 9606]
[159333] (1)
SQ
Q13868
25-72
2nn6
mutant
region h:25-72
[148311]
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Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
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© 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk