Structural Classification of Proteins
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Superfamily: Ribosomal L27 protein-like

rudiment single hybrid fold with a permuted topology
link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: Barrel-sandwich hybrid [51229]
    sandwich of half-barrel shaped beta-sheets
  4. Superfamily: Ribosomal L27 protein-like [110324]
    rudiment single hybrid fold with a permuted topology
    link to SUPERFAMILY database - Superfamily

Families:

  1. Ribosomal L27 protein [110325] (3)
    Pfam 01016
    1. Ribosomal protein L27 [110326]
      1. Thermus thermophilus [TaxId: 274] [110327] (2)
        SQ P84123
        1. 1v8q picpic
          Structural genomics target
          complexed with dtt
          1. chain a [108428] picpiclink
          2. chain b [108429] picpiclink
          3. chain c [108430] picpiclink
          4. chain d [108431] picpiclink
        2. 1vsa picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1v8qa_
          1. region u:20-85 [120518] picpiclink
      2. Escherichia coli [TaxId: 562] [159322] (29)
        SQ P0A7L8 1-84
        1. 2gyc picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2AW4 W:1-84
          1. region u:1-84 [145274] picpiclink
        2. 2gya picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2AW4 W:1-84
          1. region u:1-84 [145252] picpiclink
        3. 2qam picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2AW4 W:1-84
          complexed with mg, nmy, zn
          1. region w:6-84 [150263] picpiclink
        4. 2qao picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2AW4 W:1-84
          complexed with mg, nmy, zn
          1. region w:6-84 [150316] picpiclink
        5. 2i2t picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2AW4 W:1-84
          complexed with mg, zn
          1. region w:6-84 [145459] picpiclink
        6. 2i2v picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2AW4 W:1-84
          complexed with mg, zn
          1. region w:6-84 [145501] picpiclink
        7. 2qbe picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2AW4 W:1-84
          complexed with mg, zn
          1. region w:6-84 [150483] picpiclink
        8. 2qbg picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2AW4 W:1-84
          complexed with mg, zn
          1. region w:6-84 [150537] picpiclink
        9. 2qoz picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2AW4 W:1-84
          complexed with mg, nmy, zn
          1. region w:6-84 [151139] picpiclink
        10. 2qp1 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2AW4 W:1-84
          complexed with mg, nmy, zn
          1. region w:6-84 [151192] picpiclink
        11. 3df2 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2AW4 W:1-84
          complexed with mg, zn
          1. region w:6-84 [157652] picpiclink
        12. 3df4 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2AW4 W:1-84
          complexed with mg, zn
          1. region w:6-84 [157706] picpiclink
        13. 2qba picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2AW4 W:1-84
          complexed with lll, mg, zn
          1. region w:6-84 [150376] picpiclink
        14. 2qbc picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2AW4 W:1-84
          complexed with lll, mg, zn
          1. region w:6-84 [150429] picpiclink
        15. 2qbi picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2AW4 W:1-84
          complexed with lll, mg, zn
          1. region w:6-84 [150591] picpiclink
        16. 2qbk picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2AW4 W:1-84
          complexed with lll, mg, zn
          1. region w:6-84 [150645] picpiclink
        17. 2qov picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2AW4 W:1-84
          complexed with mg, zn
          1. region w:6-84 [151033] picpiclink
        18. 2qox picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2AW4 W:1-84
          complexed with mg, zn
          1. region w:6-84 [151086] picpiclink
        19. 1vs6 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2AW4 W:1-84
          complexed with mg
          1. region w:1-84 [144474] picpiclink
        20. 1vs8 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2AW4 W:1-84
          complexed with mg
          1. region w:1-84 [144515] picpiclink
        21. 2aw4 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          Representative structure
          complexed with mg
          1. region w:1-84 [144883] picpiclink
        22. 2awb picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2AW4 W:1-84
          complexed with mg
          1. region w:1-84 [144924] picpiclink
        23. 2z4l picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2AW4 W:1-84
          complexed with mg, par, zn
          1. region w:6-84 [154101] picpiclink
        24. 2z4n picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2AW4 W:1-84
          complexed with mg, par, zn
          1. region w:6-84 [154155] picpiclink
        25. 2vhm picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2AW4 W:1-84
          complexed with mg; mutant
          1. region w:1-84 [153086] picpiclink
        26. 2vhn picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2AW4 W:1-84
          complexed with mg
          1. region w:1-84 [153118] picpiclink
        27. 2rdo picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2AW4 W:1-84
          1. region w:1-84 [151963] picpiclink
        28. 2j28 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2AW4 W:1-84
          complexed with mg
          1. region w:1-84 [145640] picpiclink
        29. 3bbx picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2AW4 W:1-84
          complexed with mg
          1. region w:1-84 [155120] picpiclink
      3. Deinococcus radiodurans [TaxId: 1299] [159323] (11)
        SQ Q9RY65 2-85
        1. 2zjr picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          Representative structure
          complexed with mg
          1. region t:2-85 [154573] picpiclink
        2. 1xbp picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2ZJR T:2-85
          complexed with mul
          1. region u:2-85 [145886] picpiclink
        3. 1y69 picpicxref
          automatically matched to 2ZJR T:2-85
          mutant
          1. region u:2-85 [145907] picpiclink
        4. 2zjq picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2ZJR T:2-85
          1. region t:2-85 [154544] picpiclink
        5. 3cf5 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2ZJR T:2-85
          complexed with mg, txx
          1. region t:2-85 [156560] picpiclink
        6. 2zjp picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2ZJR T:2-85
          complexed with mg, nsh, zn
          1. region t:2-85 [154512] picpiclink
        7. 3dll picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2ZJR T:2-85
          complexed with mg, zld, zn
          1. region t:2-85 [157797] picpiclink
        8. 1yl3 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2ZJR T:2-85
          1. region 3:2-85 [144692] picpiclink
        9. 2b66 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2ZJR T:2-85
          1. region 0:2-85 [144955] picpiclink
        10. 2b9n picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2ZJR T:2-85
          1. region 0:2-85 [144968] picpiclink
        11. 2b9p picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2ZJR T:2-85
          1. region 0:2-85 [144977] picpiclink
  2. ECR1 N-terminal domain-like [159324] (5)
    ECR1 - Exosome complex RNA-binding protein 1
    1. Ribosomal RNA-processing protein 40, RRP40 [159325]
      1. Human (Homo sapiens) [TaxId: 9606] [159326] (1)
        SQ Q9NQT5 17-107
        1. 2nn6 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          mutant
          1. region g:16-106 [148308] picpiclink
    2. Exosome component 1, EXOSC1 [159327]
      3'-5' exoribonuclease CSL4 homolog
      1. Human (Homo sapiens) [TaxId: 9606] [159328] (1)
        SQ Q9Y3B2 6-60
        1. 2nn6 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          mutant
          1. region i:6-60 [148314] picpiclink
    3. Exosome complex RNA-binding protein 1, ECR1 [159329]
      1. Archaeoglobus fulgidus [TaxId: 2234] [159330] (3)
        SQ O29758 2-52
        1. 2ba0 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          1. region a:2-52 [146097] picpiclink
        2. 2ba0 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2BA0 A:2-52
          1. region b:2-52 [146100] picpiclink
        3. 2ba0 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2BA0 A:2-52
          1. region c:2-52 [146103] picpiclink
      2. Sulfolobus solfataricus [TaxId: 2287] [159331] (2)
        SQ Q9UXC4 7-65
        1. 2je6 picpicxrefxrefxrefxrefxrefxref
          complexed with 1pe, cl, peg; mutant
          1. region i:7-65 [147996] picpiclink
        2. 2jea picpicxrefxrefxrefxrefxrefxref
          automatically matched to 2JE6 I:7-65
          complexed with 1pe; mutant
          1. region i:7-65 [148013] picpiclink
    4. Ribosomal RNA-processing protein 4, RRP4 [159332]
      1. Human (Homo sapiens) [TaxId: 9606] [159333] (1)
        SQ Q13868 25-72
        1. 2nn6 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          mutant
          1. region h:25-72 [148311] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk