Structural Classification of Proteins
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Family: Histone lysine methyltransferases

contains metal-binding preSET and postSET domains

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: beta-clip [51268]
    double-stranded ribbon sharply bent in two places; the ribbon ends form incomplete barrel; jelly-roll
  4. Superfamily: SET domain [82199]
    duplication: the core is composed of two structural repeats similar to (circularly permuted) repeats of AFPIII
    also contains a substrate-binding alpha+beta subdomain inserted in the core
    link to SUPERFAMILY database - Superfamily
  5. Family: Histone lysine methyltransferases [82200]
    contains metal-binding preSET and postSET domains

Protein Domains:

  1. Dim-5 [82201]
    1. Fungus (Neurospora crassa) [TaxId: 5141] [82202] (2)
      1. 1ml9 picpic
        complexed with zn
        1. chain a [79282] picpiclink
      2. 1peg picpic
        complexed with histone H3 peptide
        complexed with sah, zn
        1. chain a [94598] picpiclink
        2. chain b [94599] picpiclink
  2. SET domain of Clr4 [82203]
    ortholog of Dim-5
    1. Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896] [82204] (2)
      1. 1mvh picpic
        complexed with ni, so4, zn
        1. chain a [79500] picpiclink
      2. 1mvx picpic
        complexed with ni, so4, zn
        1. chain a [79546] picpiclink
  3. Histone H3 K4-specific methyltransferase SET7/9 catalytic domain [82205]
    1. Human (Homo sapiens) [TaxId: 9606] [82206] (11)
      SQ Q8WTS6 52-336
      1. 2f69 picpicxref
        automatically matched to d1o9sa2
        complexed with ace, mlz, sah
        1. region a:194-364 [133036] picpiclink
      2. 3cbp picpicxref
        automatically matched to d1o9sa2
        complexed with bme, gol, sfg
        1. region a:194-363 [156166] picpiclink
      3. 3cbo picpicxref
        automatically matched to d1o9sa2
        complexed with bme, gol, mlz, sah
        1. region a:194-364 [156164] picpiclink
      4. 3cbm picpicxref
        automatically matched to d1o9sa2
        complexed with bme, mlz, sah
        1. region a:194-364 [156162] picpiclink
      5. 1h3i picpicxref
        complexed with mg
        1. region a:194-344 [76636] picpiclink
        2. region b:194-344 [76638] picpiclink
      6. 1mt6 picpicxref
        complexed with sah
        1. region a:194-337 [79447] picpiclink
      7. 1n6a picpicxref
        complexed with mse, sam
        1. region a:194-361 [80122] picpiclink
      8. 1xqh picpicxref
        complexed with mlz, sah
        1. region a:194-366 [115847] picpiclink
        2. region e:194-366 [115849] picpiclink
      9. 1o9s picpicxref
        complexed with mlz, sah
        1. region a:194-366 [81250] picpiclink
        2. region b:194-366 [81252] picpiclink
      10. 1n6c picpicxref
        complexed with sam
        1. region a:194-363 [80124] picpiclink
      11. 1muf picpicxref
        complexed with mse
        1. region a:194-337 [79484] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk