Structural Classification of Proteins
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Family: dUTPase-like

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: beta-clip [51268]
    double-stranded ribbon sharply bent in two places; the ribbon ends form incomplete barrel; jelly-roll
  4. Superfamily: dUTPase-like [51283]
    forms tight trimer through an additional beta-sheet in each subunit
    subunit beta-sheets are orthogonally packed around the three-fold axis
    link to SUPERFAMILY database - Superfamily
  5. Family: dUTPase-like [51284]

Protein Domains:

  1. Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) [51285]
    1. Escherichia coli [TaxId: 562] [51286] (10)
      SQ P06968
      1. 1euw picpic
        complexed with emc, gol
        1. chain a [28349] picpiclink
      2. 1eu5 picpic
        complexed with gol
        1. chain a [28350] picpiclink
      3. 1seh picpic
        complexed with trs, ump
        1. chain a [105454] picpiclink
      4. 1rnj picpic
        complexed with dup, mg, trs; mutant
        1. chain a [105021] picpiclink
      5. 2hrm picpic
        automatically matched to d1rn8a_
        complexed with edo, uc5
        1. region a:1-137 [147378] picpiclink
      6. 2hr6 picpic
        automatically matched to d1rn8a_
        complexed with dud, edo, mn
        1. region a:1-137 [147375] picpiclink
      7. 1rn8 picpic
        complexed with act, dup, mg, trs
        1. chain a [105020] picpiclink
      8. 1dup picpic
        1. chain a [28351] picpiclink
      9. 1syl picpic
        complexed with dut, mg, trs; mutant
        1. chain a [106117] picpiclink
      10. 1dud picpic
        complexed with dud
        1. chain a [28352] picpiclink
    2. Mycobacterium tuberculosis, rv2697c [TaxId: 1773] [82213] (8)
      1. 1six picpic
        complexed with dup, mg, trs
        1. chain a [98892] picpiclink
      2. 2py4 picpic
        automatically matched to d1sixa_
        complexed with dup, mg, trs
        1. region a:2-144 [139775] picpiclink
      3. 1sjn picpic
        complexed with dup, mg, no3, trs
        1. chain a [98896] picpiclink
        2. chain b [98897] picpiclink
        3. chain c [98898] picpiclink
      4. 1snf picpic
        complexed with mg, no3, trs, ump
        1. chain a [98927] picpiclink
        2. chain b [98928] picpiclink
        3. chain c [98929] picpiclink
      5. 1mq7 picpic
        structural genomics
        CASP5
        complexed with trs
        1. chain a [79404] picpiclink
      6. 1smc picpic
        complexed with dut, no3, trs
        1. chain a [98920] picpiclink
        2. chain b [98921] picpiclink
        3. chain c [98922] picpiclink
      7. 1slh picpic
        complexed with dud, mg, trs
        1. chain a [98910] picpiclink
        2. chain b [98911] picpiclink
        3. chain c [98912] picpiclink
      8. 1sm8 picpic
        complexed with cr, dut, no3, trs
        1. chain a [98917] picpiclink
        2. chain b [98918] picpiclink
        3. chain c [98919] picpiclink
    3. Human (Homo sapiens) [TaxId: 9606] [102010] (11)
      1. 3ehw picpic
        automatically matched to d1q5hc_
        complexed with dup, mg
        1. region a:24-159 [158154] picpiclink
      2. 3ehw picpic
        automatically matched to d1q5hc_
        complexed with dup, mg
        1. region b:25-159 [158155] picpiclink
      3. 3ehw picpic
        automatically matched to d1q5hc_
        complexed with dup, mg
        1. region c:25-159 [158156] picpiclink
      4. 3ehw picpic
        automatically matched to d1q5hc_
        complexed with dup, mg
        1. region x:25-159 [158157] picpiclink
      5. 3ehw picpic
        automatically matched to d1q5hc_
        complexed with dup, mg
        1. region y:25-159 [158158] picpiclink
      6. 3ehw picpic
        automatically matched to d1q5hc_
        complexed with dup, mg
        1. region z:25-159 [158159] picpiclink
      7. 1q5h picpic
        complexed with dud, mg
        1. chain a [95893] picpiclink
        2. chain b [95894] picpiclink
        3. chain c [95895] picpiclink
      8. 1q5u picpic
        1. chain x [95934] picpiclink
        2. chain y [95935] picpiclink
        3. chain z [95936] picpiclink
      9. 2hqu picpic
        automatically matched to d1q5hc_
        complexed with cl, dup, mg
        1. region a:24-159 [147361] picpiclink
      10. 2hqu picpic
        automatically matched to d1q5hc_
        complexed with cl, dup, mg
        1. region b:24-159 [147362] picpiclink
      11. 2hqu picpic
        automatically matched to d1q5hc_
        complexed with cl, dup, mg
        1. region c:24-158 [147363] picpiclink
    4. Feline immunodeficiency virus [TaxId: 11673] [51287] (8)
      1. 1f7d picpic
        complexed with mg
        1. chain a [28353] picpiclink
        2. chain b [28354] picpiclink
      2. 1dut picpic
        complexed with mg
        1. chain a [28355] picpiclink
        2. chain b [28356] picpiclink
      3. 1f7o picpic
        1. chain a [28357] picpiclink
        2. chain b [28358] picpiclink
        3. chain c [28359] picpiclink
      4. 1f7p picpic
        complexed with udp
        1. chain a [28363] picpiclink
        2. chain b [28364] picpiclink
        3. chain c [28365] picpiclink
      5. 1f7r picpic
        complexed with mg, udp
        1. chain a [28360] picpiclink
      6. 1f7q picpic
        complexed with dut
        1. chain a [28368] picpiclink
        2. chain b [28369] picpiclink
        3. chain c [28370] picpiclink
      7. 1f7k picpic
        complexed with mg, ump
        1. chain a [28361] picpiclink
        2. chain b [28362] picpiclink
      8. 1f7n picpic
        complexed with mg, ump
        1. chain a [28366] picpiclink
        2. chain b [28367] picpiclink
    5. Equine infectious anemia virus [TaxId: 11665] [51288] (2)
      1. 1dun picpic
        1. chain a [28371] picpiclink
      2. 1duc picpic
        complexed with dud, sr
        1. chain a [28372] picpiclink
    6. Plasmodium falciparum [TaxId: 5833] [141654] (3)
      SQ Q8II92 1-159
      1. 1vyq picpic
        complexed with dux
        1. region a:1-159 [120548] picpiclink
      2. 1vyq picpic
        automatically matched to 1VYQ A:1-159
        complexed with dux
        1. region b:1-154 [120549] picpiclink
      3. 1vyq picpic
        automatically matched to 1VYQ A:1-159
        complexed with dux
        1. region c:1-155 [120550] picpiclink
  2. Bifunctional dCTP deaminase/dUTPase [89425]
    elaborated fold with additional structures
    1. Archaeon Methanococcus jannaschii [TaxId: 2190] [89426] (5)
      synonym: Methanocaldococcus jannaschii
      1. 1pkh picpic
        complexed with egl
        1. chain a [94832] picpiclink
        2. chain b [94833] picpiclink
      2. 1pkk picpic
        complexed with dcp, egl
        1. chain a [94836] picpiclink
        2. chain b [94837] picpiclink
      3. 1ogh picpic
        1. chain a [86994] picpiclink
        2. chain b [86995] picpiclink
      4. 1pkj picpic
        complexed with dut, egl
        1. chain a [94834] picpiclink
        2. chain b [94835] picpiclink
      5. 2hxb picpic
        automatically matched to d1pkha_
        1. region a:1-175 [147431] picpiclink
  3. Deoxycytidine triphosphate deaminase (dCTP deaminase) [117335]
    1. Escherichia coli [TaxId: 562] [117336] (3)
      SQ P28248
      1. 1xs1 picpic
        complexed with dut, mg
        1. chain a [115892] picpiclink
        2. chain b [115893] picpiclink
        3. chain c [115894] picpiclink
        4. chain d [115895] picpiclink
        5. chain e [115896] picpiclink
        6. chain f [115897] picpiclink
      2. 1xs6 picpic
        complexed with dut, mg; mutant
        1. chain a [115913] picpiclink
        2. chain b [115914] picpiclink
        3. chain c [115915] picpiclink
        4. chain d [115916] picpiclink
        5. chain e [115917] picpiclink
        6. chain f [115918] picpiclink
      3. 1xs4 picpic
        complexed with dcp, mg; mutant
        1. chain a [115906] picpiclink
        2. chain b [115907] picpiclink
        3. chain c [115908] picpiclink
        4. chain d [115909] picpiclink
        5. chain e [115910] picpiclink
        6. chain f [115911] picpiclink
  4. Monomeric viral dUTPase [141655]
    related to the trimeric dUTPase domain by domain duplication, fusion and partial deletion; retains only one of the three ancestral active sites
    1. Epstein-barr virus [TaxId: 10376] [141656] (4)
      SQ P03195 121-256! SQ P03195 4-116
      Human herpesvirus 4
      1. 2bsy picpic
        Domain 1
        complexed with so4, ump
        1. region a:4-116 [129129] picpiclink
      2. 2bsy picpic
        includes domain 2, rudiment domain 3 and C-terminal arm
        complexed with so4, ump
        1. region a:121-256 [129130] picpiclink
      3. 2bt1 picpic
        automatically matched to 2BSY A:4-116
        complexed with dup, mg
        1. region a:4-116 [129135] picpiclink
      4. 2bt1 picpic
        automatically matched to 2BSY A:121-256
        complexed with dup, mg
        1. region a:121-256 [129136] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk