Fold: Pseudo beta-prism

beta-sandwich with one regular beta-sheet and the other beta-sheet bent in the middle with a set of aligned beta-bulges

Lineage:

1. Root: scop
2. Class: All beta proteins [48724]
3. Fold: Pseudo beta-prism [141657]
   beta-sandwich with one regular beta-sheet and the other beta-sheet bent in the middle with a set of aligned beta-bulges

Superfamilies:

1. Bacteriophage trimeric proteins domain [141658] (2)
   found in phage proteins that form trimers, but is not involved in the trimerisation
   uperfamily
   1. Mtd domain-like [141659] (1)
      1. Major tropism determinant (Mtd), N-terminal domain [141660]
         includes extra N-terminal trimerization domain; beta-alpha-beta(3)
         1. Bordetella phage bpp-1 [TaxId: 194699] [141661] (13)
            SQ Q775D6 5-170
            includes other related Bordetella phages
            1. 1yu0
               complexed with ca
               1. region a:5-170 [124025]
            2. 1yu2
               complexed with mg
               1. region a:5-170 [124029]
            3. 1yu4
               complexed with mg
               1. region a:5-170 [124033]
            4. 1yu4
               automatically matched to 1YU4 A:5-170
               complexed with mg
               1. region b:5-170 [124035]
            5. 1yu4
               automatically matched to 1YU4 A:5-170
               complexed with mg
               1. region c:5-170 [124037]
            6. 1yu1
               complexed with mg, mmc
               1. region a:5-170 [124027]
            7. 1yu3
               complexed with mg
               1. region a:5-170 [124031]
            8. 2iou
               automatically matched to d1yu0a1
               complexed with mg
               1. region a:5-170 [147750]
            9. 2iou
               automatically matched to d1yu0a1
               complexed with mg
               1. region b:5-170 [147752]
            10. 2iou
                automatically matched to d1yu0a1
                complexed with mg
                1. region c:5-170 [147754]
            11. 2iou
                automatically matched to d1yu0a1
                complexed with mg
                1. region d:5-170 [147756]
            12. 2iou
                automatically matched to d1yu0a1
                complexed with mg
                1. region e:5-170 [147758]
            13. 2iou
                automatically matched to d1yu0a1
                complexed with mg
                1. region f:5-170 [147760]
   2. Lactophage receptor-binding protein N-terminal domain [141662] (1)
      1. Receptor binding protein, rbp, N-terminal domain [141663]
         includes extra N-terminal trimerization helix
         1. Lactococcus lactis phage p2 [TaxId: 100641] [141664] (6)
            SQ Q71AW2 2-140
            1. 1zru
               complexed with gol
               1. region a:2-140 [125562]
            2. 1zru
               automatically matched to 1ZRU A:2-140
               complexed with gol
               1. region b:2-140 [125565]
            3. 1zru
               automatically matched to 1ZRU A:2-140
               complexed with gol
               1. region c:2-140 [125568]
            4. 2bsd
               automatically matched to 1ZRU A:2-140
               1. region a:2-140 [129083]
            5. 2bsd
               automatically matched to 1ZRU A:2-140
               1. region b:2-140 [129086]
            6. 2bsd
               automatically matched to 1ZRU A:2-140
               1. region c:2-140 [129089]

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk