Structural Classification of Proteins
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Superfamily: Mss4-like

duplication: tandem repeat of two similar structural motifs
link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: Mss4-like [51315]
    complex fold made of several coiled beta-sheets
  4. Superfamily: Mss4-like [51316]
    duplication: tandem repeat of two similar structural motifs
    link to SUPERFAMILY database - Superfamily

Families:

  1. RabGEF Mss4 [51317] (2)
    contains zinc-binding site
    1. RabGEF Mss4 [51318]
      1. Rat (Rattus norvegicus) [TaxId: 10116] [51319] (1)
        1. 1hxr picpic
          complexed with zn
          1. chain a [28392] picpiclink
          2. chain b [28393] picpiclink
      2. Human (Homo sapiens) [TaxId: 9606] [51320] (3)
        1. 2fu5 picpicxrefxref
          complexed with bme, zn
          1. region a:10-123 [134102] picpiclink
        2. 2fu5 picpicxrefxref
          automatically matched to 2FU5 A:10-123
          complexed with bme, zn
          1. region b:10-123 [134103] picpiclink
        3. 1fwq picpic
          complexed with zn
          1. chain a [28394] picpiclink
  2. Translationally controlled tumor protein TCTP (histamine-releasing factor) [63873] (3)
    contains an insertion of alpha helical hairpin; lacks zinc-binding site
    1. Translationally controlled tumor protein TCTP (histamine-releasing factor) [63874]
      1. Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896] [63875] (2)
        1. 1h6q picpic
          1. chain a [60692] picpiclink
        2. 1h7y picpic
          1. chain a [60732] picpiclink
      2. Plasmodium knowlesi [TaxId: 5850] [110332] (1)
        SQ P84152
        1. 1txj picpic
          Structural genomics target
          1. chain a [107424] picpiclink
      3. Human (Homo sapiens) [TaxId: 9606] [117337] (5)
        SQ P13693
        1. 1yz1 picpic
          automatically matched to d1y41a_
          1. region a:1-172 [124264] picpiclink
        2. 1yz1 picpic
          automatically matched to d1y41a_
          1. region b:1-172 [124265] picpiclink
        3. 1yz1 picpic
          automatically matched to d1y41a_
          1. region c:1-172 [124266] picpiclink
        4. 1yz1 picpic
          automatically matched to d1y41a_
          1. region d:1-172 [124267] picpiclink
        5. 2hr9 picpic
          automatically matched to d1y41a_
          1. region a:1-174 [136686] picpiclink
  3. SelR domain [75041] (2)
    1. C-terminal MsrB domain of peptide methionine sulfoxide reductase PilB [75042]
      1. Neisseria gonorrhoeae [TaxId: 485] [75043] (1)
        1. 1l1d picpic
          complexed with cac, mse
          1. chain a [73452] picpiclink
          2. chain b [73453] picpiclink
    2. Peptide methionine sulfoxide reductase MsrB [141670]
      1. Bacillus subtilis [TaxId: 1423] [141671] (1)
        SQ P54155 1-143
        1. 1xm0 picpic
          1. region a:1-143 [122140] picpiclink
  4. Glutathione-dependent formaldehyde-activating enzyme, Gfa [117338] (1)
    Pfam 04828; DUF636
    1. Glutathione-dependent formaldehyde-activating enzyme, Gfa [117339]
      1. Paracoccus denitrificans [TaxId: 266] [117340] (2)
        SQ Q51669
        1. 1x6m picpic
          complexed with gol, so4, zn
          1. chain a [114920] picpiclink
          2. chain b [114921] picpiclink
          3. chain c [114922] picpiclink
          4. chain d [114923] picpiclink
        2. 1xa8 picpic
          complexed with gol, gtt, so4, zn
          1. chain a [115033] picpiclink
          2. chain b [115034] picpiclink
          3. chain c [115035] picpiclink
          4. chain d [115036] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk