Structural Classification of Proteins
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Superfamily: Composite domain of metallo-dependent hydrolases

this domain is interrupted by the catalytic beta/alpha barrel domain
link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: Composite domain of metallo-dependent hydrolases [51337]
    pseudobarrel; mixed sheet of 7 strand folded upon itself and "buckled" by two beta-turns
  4. Superfamily: Composite domain of metallo-dependent hydrolases [51338]
    this domain is interrupted by the catalytic beta/alpha barrel domain
    link to SUPERFAMILY database - Superfamily

Families:

  1. Cytosine deaminase [69373] (1)
    1. Cytosine deaminase [69374]
      1. Escherichia coli [TaxId: 562] [69375] (8) picpic
        SQ P25524
  2. alpha-Subunit of urease [51339] (3)
    1. alpha-Subunit of urease [51340]
      1. Klebsiella aerogenes [TaxId: 28451] [51341] (27) picpic
      2. Bacillus pasteurii [TaxId: 1474] [51342] (6) picpic
      3. Helicobacter pylori [TaxId: 210] [69376] (2) picpic
  3. Hydantoinase (dihydropyrimidinase) [75044] (9)
    1. D-hydantoinase [75045]
      1. Thermus sp. [TaxId: 275] [75046] (2) picpic
      2. Bacillus stearothermophilus [TaxId: 1422] [75047] (1) picpic
      3. Burkholderia pickettii [TaxId: 329] [89437] (1) picpic
      4. Bacillus sp. AR9 [TaxId: 301298] [141682] (2) picpic
        SQ Q5DLU2 2-52,385-460
    2. L-hydantoinase [75048]
      1. Arthrobacter aurescens [TaxId: 43663] [75049] (1) picpic
    3. Dihydropyrimidinase related protein-1 [102017]
      1. Mouse (Mus musculus) [TaxId: 10090] [102018] (1) picpic
    4. Dihydropyrimidine amidohydrolase Pyd2 [141683]
      1. Yeast (Saccharomyces kluyveri) [TaxId: 4934] [141684] (12) picpic
        SQ Q9P903 2-56,441-541
      2. Dictyostelium discoideum [TaxId: 44689] [141685] (1) picpic
        SQ Q86LT2 7-59,394-490
    5. Two-domain dihydroorotase [141686]
      1. Aquifex aeolicus [TaxId: 63363] [141687] (3) picpic
        SQ O66990 1-55,366-422
  4. SAH/MTA deaminase-like [82224] (5)
    1. Hypothetical protein TM0936 [82225]
      1. Thermotoga maritima [TaxId: 2336] [82226] (3) picpic
    2. Hypothetical protein GOS_1943094 [159334]
      1. Environmental samples [159335] (1) picpic
    3. Guanine deaminase [159336]
      1. Bradyrhizobium japonicum [TaxId: 375] [159337] (1) picpic
        SQ Q89NG0 1-70,396-465
        Blr3880
      2. Human (Homo sapiens) [TaxId: 9606] [159338] (1) picpic
        SQ Q9Y2T3 8-75,389-451
      3. Clostridium acetobutylicum [TaxId: 1488] [159339] (2) picpic
        SQ Q97MB6 6-63,374-424
  5. Isoaspartyl dipeptidase [89438] (1)
    1. Isoaspartyl dipeptidase [89439]
      1. Escherichia coli [TaxId: 562] [89440] (5) picpic
        SQ P39377
  6. N-acetylglucosamine-6-phosphate deacetylase, NagA [82227] (3)
    1. N-acetylglucosamine-6-phosphate deacetylase, NagA [82228]
      1. Bacillus subtilis [TaxId: 1423] [102019] (1) picpic
      2. Thermotoga maritima [TaxId: 2336] [82229] (1) picpic
        TM0814
      3. Escherichia coli [TaxId: 562] [141688] (10) picpic
        SQ P0AF18 1-53,351-382
  7. D-aminoacylase [82230] (1)
    1. N-acyl-D-aminoacid amidohydrolase [82231]
      1. Alcaligenes faecalis [TaxId: 511] [82232] (8) picpic
  8. Adenine deaminase [141689] (1)
    1. Putative adenine deaminase EF0837 [141690]
      1. Enterococcus faecalis [TaxId: 1351] [141691] (1) picpic
        SQ Q837K0 2-52,320-369
  9. Zn-dependent arginine carboxypeptidase-like [159340] (3)
    1. Uncharacterized protein EAJ56179 [159341]
      1. Unidentified organism [TaxId: 32644] [159342] (8) picpic
        94% identity to the Burkholderia phytofirmans ortholog Bphyt_2089 (SQ B2T4I1)
    2. Zn-dependent arginine carboxypeptidase [159343]
      1. Unidentified organism [TaxId: 32644] [159344] (16) picpic
    3. Xaa-Pro dipeptidase [159345]
      1. Alteromonas macleodii [TaxId: 28108] [159346] (2) picpic
  10. Imidazolonepropionase-like [159347] (4)
    1. Imidazolonepropionase [159348]
      1. Bacillus subtilis [TaxId: 1423] [159349] (4) picpic
        SQ P42084 3-73,374-415
      2. Agrobacterium tumefaciens [TaxId: 358] [159350] (4) picpic
        SQ Q8U8Z6 15-77,379-418
    2. Probable 4-imidazolone-5-propanoate amidohydrolase GOS_1928421 [159351]
      1. Environmental samples [159352] (2) picpic
        marine metagenome
    3. Uncharacterized protein BL1453 [159353]
      1. Bifidobacterium longum [TaxId: 216816] [159354] (1) picpic
        SQ Q8G4D5 7-68,393-448
  11. DR0824-like [159355] (1)
    1. Hypothetical protein DR0824 [159356]
      1. Deinococcus radiodurans [TaxId: 1299] [159357] (1) picpic
        SQ Q9RW45 34-90,399-418

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site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk