Structural Classification of Proteins
home mail help root up expand collapse

Superfamily: N-terminal domain of MutM-like DNA repair proteins

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: N-terminal domain of MutM-like DNA repair proteins [81625]
    pseudobarrel; capped on both ends by alpha-helices
  4. Superfamily: N-terminal domain of MutM-like DNA repair proteins [81624]
    link to SUPERFAMILY database - Superfamily

Families:

  1. N-terminal domain of MutM-like DNA repair proteins [81623] (6)
    1. DNA repair protein MutM (Fpg) [81621]
      1. Thermus thermophilus [TaxId: 274] [81609] (1)
        1. 1ee8 picpicxrefxref
          complexed with zn
          1. region a:1-121 [75824] picpiclink
          2. region b:1-121 [75827] picpiclink
      2. Bacillus stearothermophilus [TaxId: 1422] [81612] (9)
        1. 1r2z picpicxrefxref
          bound to 5,6-Dihydrouracil (DhU) containing DNA
          complexed with dhu, zn; mutant
          1. region a:2-134 [96893] picpiclink
        2. 1l1z picpicxrefxref
          covalent-DNA intermediate
          complexed with ped, zn
          1. region a:2-134 [75912] picpiclink
        3. 1l1t picpicxrefxref
          bound to abasic-site containing DNA
          complexed with hpd, zn
          1. region a:2-134 [75909] picpiclink
        4. 1l2d picpicxrefxref
          DNA estranged guanine mismatch recognition complex
          complexed with hpd, zn
          1. region a:2-134 [75921] picpiclink
        5. 1l2c picpicxrefxref
          DNA estranged thymine mismatch recognition complex
          complexed with hpd, zn
          1. region a:2-134 [75918] picpiclink
        6. 1r2y picpicxrefxref
          bound to 8-Oxoguanine (OxoG) containing DNA
          complexed with 8og, zn; mutant
          1. region a:2-134 [96890] picpiclink
        7. 2f5q picpicxrefxref
          automatically matched to d1r2ya2
          complexed with 8og, zn; mutant
          1. region a:2-134 [133005] picpiclink
        8. 1l2b picpicxrefxref
          DNA end-product structure
          complexed with ad2, zn
          1. region a:2-134 [75915] picpiclink
        9. 2f5s picpicxrefxref
          automatically matched to d1r2ya2
          complexed with 8og, zn; mutant
          1. region a:2-134 [133008] picpiclink
      3. Escherichia coli [TaxId: 562] [81616] (1)
        1. 1k82 picpicxrefxref
          covalently trapped with DNA
          complexed with ped, zn
          1. region a:1-128 [75867] picpiclink
          2. region b:1-128 [75870] picpiclink
          3. region c:1-128 [75873] picpiclink
          4. region d:1-128 [75876] picpiclink
      4. Lactococcus lactis [TaxId: 1358] [81617] (7)
        SQ P42371
        1. 1tdz picpicxrefxref
          complexed with fox, gol, zn
          1. region a:2-131 [106788] picpiclink
        2. 1pjj picpicxrefxref
          complexed with 3dr, gol, zn; mutant
          1. region a:1-131 [104165] picpiclink
        3. 1xc8 picpicxrefxref
          automatically matched to d1kfva2
          complexed with fox, gol, zn
          1. region a:2-131 [121853] picpiclink
        4. 1pji picpicxrefxref
          complexed with cry, pdi, zn
          1. region a:1-131 [104162] picpiclink
        5. 1pm5 picpicxrefxref
          complexed with 3dr, gol, zn
          1. region a:1-131 [104191] picpiclink
        6. 1nnj picpicxrefxref
          complexed with cry, pdi, zn; mutant
          1. region a:1-131 [80670] picpiclink
        7. 1kfv picpicxrefxref
          complexed with cry, mse, pdi, zn; mutant
          1. region a:1-131 [75887] picpiclink
          2. region b:1-131 [75890] picpiclink
    2. Endonuclease VIII [82233]
      1. Escherichia coli [TaxId: 562] [82234] (9)
        SQ P50465
        1. 1k3x picpicxrefxref
          complexed with bro, gol, ped, so4, zn
          1. region a:1-124 [77243] picpiclink
        2. 2ea0 picpicxrefxref
          automatically matched to d1k3wa2
          complexed with gol, ped, so4, zn
          1. region a:1-124 [146755] picpiclink
        3. 1k3w picpicxrefxref
          complexed with ped, so4, zn
          1. region a:1-124 [77240] picpiclink
        4. 2opf picpicxrefxref
          automatically matched to d1k3wa2
          complexed with gol, ped, so4, zn; mutant
          1. region a:1-124 [148964] picpiclink
        5. 1q3b picpicxrefxref
          complexed with gol, mg, zn; mutant
          1. region a:1-124 [104519] picpiclink
        6. 1q3c picpicxrefxref
          complexed with gol, mg, zn; mutant
          1. region a:2-124 [104522] picpiclink
        7. 1q39 picpicxrefxref
          complexed with ca, zn
          1. region a:4-124 [104516] picpiclink
        8. 2oq4 picpicxrefxrefxrefxref
          automatically matched to d1k3wa2
          complexed with na, ped, so4, zn; mutant
          1. region a:1-124 [148979] picpiclink
        9. 2oq4 picpicxrefxrefxrefxref
          automatically matched to d1k3wa2
          complexed with na, ped, so4, zn; mutant
          1. region b:1-124 [148982] picpiclink
    3. Endonuclease VIII-like 1 (NEIL1) [110335]
      1. Human (Homo sapiens) [TaxId: 9606] [110336] (1)
        SQ Q96FI4 1-333
        1. 1tdh picpicxrefxref
          complexed with tmn
          1. region a:2-131 [106773] picpiclink
Enter search key:
MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk