Structural Classification of Proteins
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Family: AbrB N-terminal domain-like

dimeric fold similar to MazE; the DNA-binding site is similar to the conserved surface site of MraZ

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: Double-split beta-barrel [89446]
    pseudobarrel; capped on both ends by alpha-helices
  4. Superfamily: AbrB/MazE/MraZ-like [89447]
    members of this superfamily are known or predicted to have DNA-binding function
    link to SUPERFAMILY database - Superfamily
  5. Family: AbrB N-terminal domain-like [54743]
    dimeric fold similar to MazE; the DNA-binding site is similar to the conserved surface site of MraZ

Protein Domains:

  1. Transcription-state regulator AbrB, the N-terminal DNA recognition domain [54744]
    1. Bacillus subtilis [TaxId: 1423] [54745] (6)
      1. 1yfb picpic
        automatically matched to d1ekta_
        1. region a:3-53 [123057] picpiclink
      2. 1yfb picpic
        automatically matched to d1ekta_
        1. region b:3-53 [123058] picpiclink
      3. 1ysf picpic
        automatically matched to d1ekta_
        1. region a:3-53 [123971] picpiclink
      4. 1ysf picpic
        automatically matched to d1ekta_
        1. region b:3-53 [123972] picpiclink
      5. 1z0r picpic
        automatically matched to d1ekta_
        1. region a:1-53 [124326] picpiclink
      6. 1z0r picpic
        automatically matched to d1ekta_
        1. region b:1-53 [124327] picpiclink
  2. Putative transition state regulator ABH [159358]
    1. Bacillus subtilis [TaxId: 1423] [159359] (2)
      SQ P39758 1-54
      1. 2fy9 picpic
        1. region a:1-54 [147052] picpiclink
      2. 2fy9 picpic
        automatically matched to 2FY9 A:1-54
        1. region b:1-54 [147053] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk