Structural Classification of Proteins
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Superfamily: gamma-Crystallin-like

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: gamma-Crystallin-like [49694]
    sandwich; 8 strands in 2 sheets; greek-key
    duplication: has internal pseudo twofold symmetry
  4. Superfamily: gamma-Crystallin-like [49695]
    link to SUPERFAMILY database - Superfamily

Families:

  1. Crystallins/Ca-binding development proteins [49696] (13)
    1. gamma-Crystallin [49697]
      duplication consists of two domains of this fold
      1. Cow (Bos taurus), isoform II (B) [TaxId: 9913] [49698] (6)
        1. 1amm picpic
          1. region a:1-85 [23587] picpiclink
          2. region a:86-174 [23588] picpiclink
        2. 4gcr picpic
          1. region a:1-85 [23589] picpiclink
          2. region a:86-174 [23590] picpiclink
        3. 1dsl picpic
          C-terminal domain only
          1. chain a [23591] picpiclink
        4. 1gcs picpic
          1. region a:1-85 [23592] picpiclink
          2. region a:86-174 [23593] picpiclink
        5. 1i5i picpic
          mutant
          1. region a:1-85 [61786] picpiclink
          2. region a:86-173 [61787] picpiclink
        6. 1gam picpic
          C-terminal domain only
          1. chain a [23594] picpiclink
          2. chain b [23595] picpiclink
      2. Cow (Bos taurus), isoform IIIb (D) [TaxId: 9913] [49699] (1)
        1. 1elp picpic
          1. region a:1-85 [23596] picpiclink
          2. region a:87-174 [23597] picpiclink
          3. region b:1-85 [23598] picpiclink
          4. region b:87-174 [23599] picpiclink
      3. Human (Homo sapiens), isoform D [TaxId: 9606] [89230] (6)
        1. 1h4a picpic
          mutant
          1. region x:1-85 [83479] picpiclink
          2. region x:87-174 [83480] picpiclink
        2. 1hk0 picpic
          1. region x:1-85 [83522] picpiclink
          2. region x:87-174 [83523] picpiclink
        3. 2g98 picpic
          automatically matched to d1h4ax1
          1. region a:1-85 [134794] picpiclink
        4. 2g98 picpic
          automatically matched to d1h4ax2
          1. region a:86-171 [134795] picpiclink
        5. 2g98 picpic
          automatically matched to d1h4ax1
          1. region b:1-85 [134796] picpiclink
        6. 2g98 picpic
          automatically matched to d1h4ax2
          1. region b:86-170 [134797] picpiclink
      4. Cow (Bos taurus), isoform S [TaxId: 9913] [49700] (1)
        1. 1a7h picpic
          C-terminal domain only
          mutant
          1. chain a [23600] picpiclink
          2. chain b [23601] picpiclink
      5. Human (Homo sapiens) [TaxId: 9606] [69202] (1)
        1. 1ha4 picpic
          C-terminal domain only
          1. chain a [65745] picpiclink
          2. chain b [65746] picpiclink
      6. Cow (Bos taurus), isoform F [TaxId: 9913] [49701] (1)
        1. 1a45 picpic
          1. region a:1-84 [23602] picpiclink
          2. region a:86-174 [23603] picpiclink
      7. Cow (Bos taurus), isoform E [TaxId: 9913] [101571] (1)
        1. 1m8u picpic
          1. region a:1-85 [91233] picpiclink
          2. region a:87-174 [91234] picpiclink
    2. beta-Crystallin [49702]
      duplication consists of two domains of this fold
      1. Cow (Bos taurus) [TaxId: 9913] [49703] (4)
        1. 1ytq picpic
          automatically matched to d1blbc1
          1. region a:14-103 [124012] picpiclink
        2. 1ytq picpic
          automatically matched to d1blba2
          1. region a:104-194 [124013] picpiclink
        3. 2bb2 picpic
          complexed with seo
          1. region a:-2-85 [23604] picpiclink
          2. region a:86-175 [23605] picpiclink
        4. 1blb picpic
          1. region a:-6-85 [23606] picpiclink
          2. region a:86-175 [23607] picpiclink
          3. region b:-2-85 [23608] picpiclink
          4. region b:86-175 [23609] picpiclink
          5. region c:-8-85 [23610] picpiclink
          6. region c:86-175 [23611] picpiclink
          7. region d:-4-85 [23612] picpiclink
          8. region d:86-175 [23613] picpiclink
      2. Rat (Rattus norvegicus), isoform E [TaxId: 10116] [49704] (10)
        1. 1zir picpic
          automatically matched to d1a5da1
          complexed with act
          1. region a:1001-1084 [125126] picpiclink
        2. 1zir picpic
          automatically matched to d1a5da2
          complexed with act
          1. region a:1085-1173 [125127] picpiclink
        3. 1zie picpic
          automatically matched to d1a5da1
          complexed with act
          1. region a:1001-1084 [125122] picpiclink
        4. 1zie picpic
          automatically matched to d1a5da2
          complexed with act
          1. region a:1085-1172 [125123] picpiclink
        5. 1zgt picpic
          automatically matched to d1a5da1
          complexed with act
          1. region a:1001-1084 [125059] picpiclink
        6. 1zgt picpic
          automatically matched to d1a5da2
          complexed with act
          1. region a:1085-1173 [125060] picpiclink
        7. 1ziq picpic
          automatically matched to d1a5da1
          complexed with act
          1. region a:1001-1084 [125124] picpiclink
        8. 1ziq picpic
          automatically matched to d1a5da2
          complexed with act
          1. region a:1085-1173 [125125] picpiclink
        9. 1a5d picpic
          1. region a:1-84 [23614] picpiclink
          2. region a:85-174 [23615] picpiclink
          3. region b:1-84 [23616] picpiclink
          4. region b:85-174 [23617] picpiclink
        10. 1bd7 picpic
          circularly permuted sequence
          1. chain a [23618] picpiclink
          2. chain b [23619] picpiclink
      3. Mouse (Mus musculus) [TaxId: 10090] [49705] (1)
        1. 1e7n picpic
          N-terminal domain only
          1. chain a [23620] picpiclink
          2. chain b [23621] picpiclink
      4. Human (Homo sapiens) [TaxId: 9606] [101572] (1)
        1. 1oki picpic
          1. region a:54-144 [93255] picpiclink
          2. region a:145-236 [93256] picpiclink
          3. region b:54-144 [93257] picpiclink
          4. region b:145-237 [93258] picpiclink
    3. Protein S [49706]
      duplication consists of two domains of this fold
      1. Myxococcus xanthus [TaxId: 34] [49707] (3)
        1. 1nps picpic
          N-terminal domain
          1. chain a [23622] picpiclink
        2. 1prs picpic
          complexed with ca
          1. region a:1-90 [23625] picpiclink
          2. region a:91-173 [23626] picpiclink
        3. 1prr picpic
          complexed with ca
          1. region a:1-90 [23623] picpiclink
          2. region a:91-173 [23624] picpiclink
    4. Spherulin 3a (S3a) [49708]
      1. Physarum polycephalum [TaxId: 5791] [49709] (2)
        1. 1hdf picpic
          complexed with ca; mutant
          1. chain a [23627] picpiclink
          2. chain b [23628] picpiclink
        2. 1ag4 picpic
          1. chain a [23629] picpiclink
  2. Yeast killer toxin [49710] (1)
    1. Yeast killer toxin [49711]
      1. Williopsis mrakii [TaxId: 4963] [49712] (1)
        1. 1wkt picpic
          1. chain a [23630] picpiclink
  3. Streptomyces metalloproteinase inhibitor, SMPI [49713] (1)
    1. Streptomyces metalloproteinase inhibitor, SMPI [49714]
      1. Streptomyces nigrescens [TaxId: 1920] [49715] (1)
        1. 1bhu picpic
          1. chain a [23631] picpiclink
  4. Killer toxin-like protein SKLP [49716] (1)
    1. Killer toxin-like protein SKLP [49717]
      1. Streptomyces sp. [TaxId: 1931] [49718] (1)
        1. 1f53 picpic
          1. chain a [23632] picpiclink
  5. Antifungal protein AFP1 [63693] (1)
    shares putative chitin-binding site with SKLP
    1. Antifungal protein AFP1 [63694]
      1. Streptomyces tendae, tu901 [TaxId: 1932] [63695] (2)
        1. 1g6e picpic
          1. chain a [60317] picpiclink
        2. 1gh5 picpic
          CASP4
          1. chain a [60517] picpiclink
  6. Plant antimicrobial protein MIAMP1 [49719] (1)
    1. Plant antimicrobial protein MIAMP1 [49720]
      1. Macadamia nut (Macadamia integrifolia) [TaxId: 60698] [49721] (1)
        1. 1c01 picpic
          1. chain a [23633] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk