Structural Classification of Proteins
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Superfamily: Carbohydrate-binding domain

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: Common fold of diphtheria toxin/transcription factors/cytochrome f [49379]
    sandwich; 9 strands in 2 sheet; greek-key; subclass of immunoglobin-like fold
  4. Superfamily: Carbohydrate-binding domain [49384]
    link to SUPERFAMILY database - Superfamily

Families:

  1. Cellulose-binding domain family II [49385] (2)
    1. Exo-1,4-beta-D-glycanase (cellulase, xylanase), cellulose-binding domain, CBD [49386]
      belongs to subfamily IIa
      1. Cellulomonas fimi [TaxId: 1708] [49387] (2) picpic
    2. Endo-1,4-beta xylanase D, xylan binding domain, XBD [49388]
      belongs to subfamily IIb
      1. Cellulomonas fimi [TaxId: 1708] [49389] (6) picpic
  2. Cellulose-binding domain family III [49390] (11)
    Pfam 00963
    1. Cellusomal scaffolding protein A, scaffoldin [49391]
      1. Clostridium thermocellum [TaxId: 1515] [49392] (1) picpic
      2. Clostridium cellulolyticum [TaxId: 1521] [49393] (1) picpic
    2. Endo/exocellulase:cellobiose E-4, C-terminal domain [49394]
      1. Thermomonospora fusca [TaxId: 2021] [49395] (4) picpic
      2. Clostridium cellulolyticum, atcc 35319 [TaxId: 1521] [89209] (4) picpic
        endoglucanase 9G
    3. Cohesin domain [49396]
      1. Clostridium thermocellum, cellulosome, various modules [TaxId: 1515] [49397] (6) picpic
      2. Clostridium cellulolyticum [TaxId: 1521] [158919] (3) picpic
    4. Cellulosomal scaffoldin adaptor protein B, ScaB [110073]
      1. Acetivibrio cellulolyticus [TaxId: 35830] [110074] (2) picpic
        SQ Q7WYN3 29-199
    5. Cellulosomal scaffoldin ScaA [141076]
      1. Bacteroides cellulosolvens [TaxId: 35825] [141077] (1) picpic
        SQ Q9FDJ9 2073-2242
    6. Scaffolding dockerin binding protein A, SdbA [141078]
      1. Clostridium thermocellum [TaxId: 1515] [141079] (2) picpic
        SQ P71143 30-191! SQ P71143 30-195
    7. Exo-alpha-sialidase [158920]
      pre C-terminal domain
      1. Clostridium perfringens [TaxId: 1502] [158921] (1) picpic
        SQ Q0TTQ4 945-1080
    8. O-GlcNAcase NagJ [158922]
      pre C-terminal domain
      1. Clostridium perfringens [TaxId: 1502] [158923] (5) picpic
        SQ Q0TR53 768-909! SQ Q0TR53 774-906
  3. Bacterial chitobiase, n-terminal domain [49398] (1)
    1. Bacterial chitobiase, n-terminal domain [49399]
      1. Serratia marcescens [TaxId: 615] [49400] (4) picpic
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk