Structural Classification of Proteins

Superfamily: Bacterial adhesins

: uperfamily

Lineage:

Root: scop
Class: All beta proteins [48724]
Fold: Common fold of diphtheria toxin/transcription factors/cytochrome f [49379]
sandwich; 9 strands in 2 sheet; greek-key; subclass of immunoglobin-like fold
Superfamily: Bacterial adhesins [49401]
uperfamily

Families:

Collagen-binding domain of adhesin [49402] (1)
1. Collagen-binding domain of adhesin [49403]
  1. Staphylococcus aureus [TaxId: 1280] [49404] (1)
    1. 1amx
      1. chain a [22410]
Fibrinogen-binding domain [89210] (2)
duplication: contains two differently decorated domains of this fold
1. Clumping factor A [89211]
  1. Staphylococcus aureus [TaxId: 1280] [89212] (1)
    1. 1n67
      complexed with mg
      1. region a:229-369 [85354]
      2. region a:370-560 [85355]
2. Fibrinogen-binding adhesin SdrG [101550]
  1. Staphylococcus epidermidis [TaxId: 1282] [101551] (6)
    1. 1r17
      complexed with fibrinopeptide B
      complexed with ca
      1. region a:276-424 [96796]
      2. region a:425-596 [96797]
      3. region b:276-424 [96798]
      4. region b:425-595 [96799]
    2. 2ral
      automatically matched to d1r17a1
      mutant
      1. region a:276-424 [151823]
    3. 2ral
      automatically matched to d1r17a2
      mutant
      1. region a:425-594 [151824]
    4. 2ral
      automatically matched to d1r17a1
      mutant
      1. region b:276-424 [151825]
    5. 2ral
      automatically matched to d1r17a2
      mutant
      1. region b:425-594 [151826]
    6. 1r19
      1. region a:277-424 [96801]
      2. region a:425-580 [96802]
      3. region b:277-424 [96803]
      4. region b:425-584 [96804]
      5. region c:277-424 [96805]
      6. region c:425-584 [96806]
      7. region d:277-424 [96807]
      8. region d:425-586 [96808]
Pilus subunits [49405] (8)
1. Mannose-specific adhesin FimH [49406]
  duplication: consists of two domains of this fold; C-terminal domain lacks the last strand
  1. Escherichia coli [TaxId: 562] [49407] (9)
    1. 1uwf
      automatically matched to d1klfb1
      complexed with deg, gol
      1. region a:1-158 [119758]
    2. 1ze3
      automatically matched to d1kiub2
      complexed with edo
      1. region h:159-279 [124977]
    3. 1tr7
      automatically matched to d1klfb1
      complexed with cac, deg, mpd
      1. region a:1-158 [119328]
    4. 1tr7
      automatically matched to d1klfb1
      complexed with cac, deg, mpd
      1. region b:1-158 [119329]
    5. 2vco
      automatically matched to d1klfb1
      complexed with man, nag, ni, so4
      1. region a:1-158 [152920]
    6. 2vco
      automatically matched to d1klfb1
      complexed with man, nag, ni, so4
      1. region b:1-158 [152921]
    7. 1klf
      complexed with man
      1. region b:1-158 [72684]
      2. region b:159-279 [72685]
      3. region d:1-158 [72688]
      4. region d:159-279 [72689]
      5. region f:1-158 [72692]
      6. region f:159-279 [72693]
      7. region h:1-158 [72696]
      8. region h:159-279 [72697]
      9. region j:1-158 [72700]
      10. region j:159-279 [72701]
      11. region l:1-158 [72704]
      12. region l:159-279 [72705]
      13. region n:1-158 [72708]
      14. region n:159-279 [72709]
      15. region p:1-158 [72712]
      16. region p:159-279 [72713]
    8. 1kiu
      complexed with mma; mutant
      1. region b:1-158 [72525]
      2. region b:159-279 [72526]
      3. region d:1-158 [72529]
      4. region d:159-279 [72530]
      5. region f:1-158 [72533]
      6. region f:159-279 [72534]
      7. region h:1-158 [72537]
      8. region h:159-279 [72538]
      9. region j:1-158 [72541]
      10. region j:159-279 [72542]
      11. region l:1-158 [72545]
      12. region l:159-279 [72546]
      13. region n:1-158 [72549]
      14. region n:159-279 [72550]
      15. region p:1-158 [72553]
      16. region p:159-279 [72554]
    9. 1qun
      1. region b:1-158 [22411]
      2. region b:159-279 [22412]
      3. region d:1-158 [22413]
      4. region d:159-279 [22414]
      5. region f:1-158 [22415]
      6. region f:159-279 [22416]
      7. region h:1-158 [22417]
      8. region h:159-279 [22418]
      9. region j:1-158 [22419]
      10. region j:159-279 [22420]
      11. region l:1-158 [22421]
      12. region l:159-279 [22422]
      13. region n:1-158 [22423]
      14. region n:159-279 [22424]
      15. region p:1-158 [22425]
      16. region p:159-279 [22426]
2. PapK pilus subunit [49408]
  similar to C-terminal domain of FimH
  1. Escherichia coli [TaxId: 562] [49409] (1)
    1. 1pdk
      1. chain b [22427]
3. PapE pilus subunit [81990]
  1. Escherichia coli [TaxId: 562] [81991] (2)
    1. 1n12
      N-terminal-deleted; bound to a peptide corresponding to the n-terminal extension of the papk pilus subunit, chains B and D
      complexed with mse; mutant
      1. chain a [79779]
      2. chain c [79780]
    2. 1n0l
      N-terminal-deleted
      complexed with mse; mutant
      1. chain b [79746]
      2. chain d [79749]
4. F1 capsule antigen Caf1 [89213]
  1. Yersinia pestis [TaxId: 632] [89214] (3)
    1. 1p5v
      1. chain b [87814]
    2. 1p5u
      mutant
      1. chain b [87810]
      2. chain c [87811]
    3. 1z9s
      1. region b:1-149 [144738]
5. SafA pilus subunit [141080]
  1. Salmonella typhimurium [TaxId: 90371] [141081] (13)
    SQ Q8ZRK4 36-168! SQ Q8ZRK4 46-170
    1. 2cnz
      automatically matched to 2CO7 A:20-144
      mutant
      1. region a:22-144 [130662]
    2. 2co4
      automatically matched to 2CO7 A:20-144
      1. region a:22-144 [130667]
    3. 2co3
      forms swapped dimer through the extra N-terminal strand (included)
      mutant
      1. region a:10-142 [130665]
    4. 2co3
      automatically matched to 2CO3 A:10-142
      mutant
      1. region b:10-142 [130666]
    5. 2cny
      automatically matched to 2CO7 A:20-144
      mutant
      1. region a:22-144 [130661]
    6. 2co7
      complexed with so4; mutant
      1. region a:20-144 [130669]
    7. 2co6
      automatically matched to 2CO7 A:20-144
      1. region a:22-144 [130668]
    8. 2co1
      automatically matched to 2CO7 A:20-144
      mutant
      1. region a:22-144 [130663]
    9. 2co2
      automatically matched to 2CO7 A:20-144
      mutant
      1. region a:23-143 [130664]
    10. 3cre
      automatically matched to d2co3a1
      1. region a:22-142 [156946]
    11. 3cre
      automatically matched to d2co3a1
      1. region b:10-142 [156947]
    12. 3crf
      automatically matched to d2co3a1
      1. region a:22-142 [156948]
    13. 3crf
      automatically matched to d2co3a1
      1. region b:10-142 [156949]
6. PAP fimbrial minor pilin protein PapH [158924]
  1. Escherichia coli [TaxId: 562] [158925] (1)
    SQ P07111 46-195
    1. 2j2z
      complexed with co, so4
      1. region b:24-173 [145642]
7. Pap fimbrial major pilin protein PapA [158926]
  1. Escherichia coli [TaxId: 562] [158927] (5)
    SQ P04127 30-185! SQ P04127 32-185
    1. 2uy6
      mutant
      1. region b:10-163 [145763]
    2. 2uy7
      complexed with so4; mutant
      1. region b:8-163 [145764]
    3. 2uy7
      automatically matched to 2UY7 B:8-163
      complexed with so4; mutant
      1. region d:8-163 [145765]
    4. 2uy7
      automatically matched to 2UY7 B:8-163
      complexed with so4; mutant
      1. region f:8-163 [145766]
    5. 2uy7
      automatically matched to 2UY7 B:8-163
      complexed with so4; mutant
      1. region h:8-163 [145767]
8. Invasin AfaD [158928]
  1. Escherichia coli [TaxId: 562] [158929] (4)
    SQ Q47038 27-147
    1. 2axw
      complexed with cl, gol
      1. region a:1-121 [146075]
    2. 2axw
      automatically matched to 2AXW A:1-121
      complexed with cl, gol
      1. region b:1-121 [146076]
    3. 2ixq
      1. region a:2-122 [145550]
    4. 2fvn
      1. region a:2-122 [147050]
PapG adhesin receptor-binding domain [63680] (1)
1. PapG adhesin receptor-binding domain [63681]
  1. Escherichia coli [TaxId: 562] [63682] (2)
    1. 1j8r
      complexed with gal, glc, nag
      1. chain a [62745]
    2. 1j8s
      1. chain a [62746]
F17c-type adhesin [89215] (2)
1. Fimbrial adhesin F17-AG lectin domain [89216]
  1. Escherichia coli [TaxId: 562] [89217] (6)
    1. 2bsc
      automatically matched to d1o9va_
      complexed with nag
      1. region a:1-176 [129080]
    2. 1o9w
      complexed with nag
      1. chain a [86713]
    3. 1zpl
      automatically matched to d1o9va_
      complexed with mag
      1. region a:1-176 [125467]
    4. 1zpl
      automatically matched to d1o9va_
      complexed with mag
      1. region b:1-176 [125468]
    5. 1o9v
      complexed with sng
      1. chain a [86712]
    6. 1o9z
      1. chain a [86717]
2. Fimbrial lectin GafD [101552]
  1. Escherichia coli [TaxId: 562] [101553] (1)
    1. 1oio
      complexed with nag
      1. chain a [93069]
      2. chain b [93070]
Dr-family adhesin [110075] (1)
Pfam 04619
1. DraA/Afimbrial adhesin Afa-III [110076]
  1. Escherichia coli [TaxId: 562] [110077] (7)
    SQ Q57254 P24093 23-159
    1. 1ut1
      complexed with egl, so4; mutant
      1. chain a [108014]
      2. chain b [108015]
      3. chain c [108016]
      4. chain d [108017]
      5. chain e [108018]
      6. chain f [108019]
    2. 1usq
      complexed with clm, egl, so4; mutant
      1. chain a [108005]
      2. chain b [108006]
      3. chain c [108007]
      4. chain d [108008]
      5. chain e [108009]
      6. chain f [108010]
    3. 1usz
      complexed with cl, so4; mutant
      1. chain a [108011]
    4. 1ut2
      complexed with so4; mutant
      1. chain a [108020]
      2. chain b [108021]
      3. chain c [108022]
      4. chain d [108023]
      5. chain e [108024]
      6. chain f [108025]
      7. chain g [108026]
      8. chain h [108027]
      9. chain i [108028]
    5. 2ver
      automatically matched to d1rxla_
      complexed with mtn
      1. region a:1-133 [153026]
    6. 1rxl
      1. chain a [111962]
    7. 2ixq
      automatically matched to d1rxla_
      1. region b:1-133 [137785]