Structural Classification of Proteins
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Family: Pilus subunits

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: Common fold of diphtheria toxin/transcription factors/cytochrome f [49379]
    sandwich; 9 strands in 2 sheet; greek-key; subclass of immunoglobin-like fold
  4. Superfamily: Bacterial adhesins [49401]
    link to SUPERFAMILY database - Superfamily
  5. Family: Pilus subunits [49405]

Protein Domains:

  1. Mannose-specific adhesin FimH [49406]
    duplication: consists of two domains of this fold; C-terminal domain lacks the last strand
    1. Escherichia coli [TaxId: 562] [49407] (9)
      1. 1uwf picpic
        automatically matched to d1klfb1
        complexed with deg, gol
        1. region a:1-158 [119758] picpiclink
      2. 1ze3 picpicxrefxrefxref
        automatically matched to d1kiub2
        complexed with edo
        1. region h:159-279 [124977] picpiclink
      3. 1tr7 picpic
        automatically matched to d1klfb1
        complexed with cac, deg, mpd
        1. region a:1-158 [119328] picpiclink
      4. 1tr7 picpic
        automatically matched to d1klfb1
        complexed with cac, deg, mpd
        1. region b:1-158 [119329] picpiclink
      5. 2vco picpic
        automatically matched to d1klfb1
        complexed with man, nag, ni, so4
        1. region a:1-158 [152920] picpiclink
      6. 2vco picpic
        automatically matched to d1klfb1
        complexed with man, nag, ni, so4
        1. region b:1-158 [152921] picpiclink
      7. 1klf picpicxrefxref
        complexed with man
        1. region b:1-158 [72684] picpiclink
        2. region b:159-279 [72685] picpiclink
        3. region d:1-158 [72688] picpiclink
        4. region d:159-279 [72689] picpiclink
        5. region f:1-158 [72692] picpiclink
        6. region f:159-279 [72693] picpiclink
        7. region h:1-158 [72696] picpiclink
        8. region h:159-279 [72697] picpiclink
        9. region j:1-158 [72700] picpiclink
        10. region j:159-279 [72701] picpiclink
        11. region l:1-158 [72704] picpiclink
        12. region l:159-279 [72705] picpiclink
        13. region n:1-158 [72708] picpiclink
        14. region n:159-279 [72709] picpiclink
        15. region p:1-158 [72712] picpiclink
        16. region p:159-279 [72713] picpiclink
      8. 1kiu picpicxrefxref
        complexed with mma; mutant
        1. region b:1-158 [72525] picpiclink
        2. region b:159-279 [72526] picpiclink
        3. region d:1-158 [72529] picpiclink
        4. region d:159-279 [72530] picpiclink
        5. region f:1-158 [72533] picpiclink
        6. region f:159-279 [72534] picpiclink
        7. region h:1-158 [72537] picpiclink
        8. region h:159-279 [72538] picpiclink
        9. region j:1-158 [72541] picpiclink
        10. region j:159-279 [72542] picpiclink
        11. region l:1-158 [72545] picpiclink
        12. region l:159-279 [72546] picpiclink
        13. region n:1-158 [72549] picpiclink
        14. region n:159-279 [72550] picpiclink
        15. region p:1-158 [72553] picpiclink
        16. region p:159-279 [72554] picpiclink
      9. 1qun picpicxrefxref
        1. region b:1-158 [22411] picpiclink
        2. region b:159-279 [22412] picpiclink
        3. region d:1-158 [22413] picpiclink
        4. region d:159-279 [22414] picpiclink
        5. region f:1-158 [22415] picpiclink
        6. region f:159-279 [22416] picpiclink
        7. region h:1-158 [22417] picpiclink
        8. region h:159-279 [22418] picpiclink
        9. region j:1-158 [22419] picpiclink
        10. region j:159-279 [22420] picpiclink
        11. region l:1-158 [22421] picpiclink
        12. region l:159-279 [22422] picpiclink
        13. region n:1-158 [22423] picpiclink
        14. region n:159-279 [22424] picpiclink
        15. region p:1-158 [22425] picpiclink
        16. region p:159-279 [22426] picpiclink
  2. PapK pilus subunit [49408]
    similar to C-terminal domain of FimH
    1. Escherichia coli [TaxId: 562] [49409] (1)
      1. 1pdk picpicxrefxref
        1. chain b [22427] picpiclink
  3. PapE pilus subunit [81990]
    1. Escherichia coli [TaxId: 562] [81991] (2)
      1. 1n12 picpic
        N-terminal-deleted; bound to a peptide corresponding to the n-terminal extension of the papk pilus subunit, chains B and D
        complexed with mse; mutant
        1. chain a [79779] picpiclink
        2. chain c [79780] picpiclink
      2. 1n0l picpicxrefxref
        N-terminal-deleted
        complexed with mse; mutant
        1. chain b [79746] picpiclink
        2. chain d [79749] picpiclink
  4. F1 capsule antigen Caf1 [89213]
    1. Yersinia pestis [TaxId: 632] [89214] (3)
      1. 1p5v picpicxrefxref
        1. chain b [87814] picpiclink
      2. 1p5u picpicxrefxref
        mutant
        1. chain b [87810] picpiclink
        2. chain c [87811] picpiclink
      3. 1z9s picpicxrefxref
        1. region b:1-149 [144738] picpiclink
  5. SafA pilus subunit [141080]
    1. Salmonella typhimurium [TaxId: 90371] [141081] (13)
      SQ Q8ZRK4 36-168! SQ Q8ZRK4 46-170
      1. 2cnz picpic
        automatically matched to 2CO7 A:20-144
        mutant
        1. region a:22-144 [130662] picpiclink
      2. 2co4 picpic
        automatically matched to 2CO7 A:20-144
        1. region a:22-144 [130667] picpiclink
      3. 2co3 picpic
        forms swapped dimer through the extra N-terminal strand (included)
        mutant
        1. region a:10-142 [130665] picpiclink
      4. 2co3 picpic
        automatically matched to 2CO3 A:10-142
        mutant
        1. region b:10-142 [130666] picpiclink
      5. 2cny picpic
        automatically matched to 2CO7 A:20-144
        mutant
        1. region a:22-144 [130661] picpiclink
      6. 2co7 picpicxrefxref
        complexed with so4; mutant
        1. region a:20-144 [130669] picpiclink
      7. 2co6 picpicxrefxref
        automatically matched to 2CO7 A:20-144
        1. region a:22-144 [130668] picpiclink
      8. 2co1 picpic
        automatically matched to 2CO7 A:20-144
        mutant
        1. region a:22-144 [130663] picpiclink
      9. 2co2 picpic
        automatically matched to 2CO7 A:20-144
        mutant
        1. region a:23-143 [130664] picpiclink
      10. 3cre picpic
        automatically matched to d2co3a1
        1. region a:22-142 [156946] picpiclink
      11. 3cre picpic
        automatically matched to d2co3a1
        1. region b:10-142 [156947] picpiclink
      12. 3crf picpic
        automatically matched to d2co3a1
        1. region a:22-142 [156948] picpiclink
      13. 3crf picpic
        automatically matched to d2co3a1
        1. region b:10-142 [156949] picpiclink
  6. PAP fimbrial minor pilin protein PapH [158924]
    1. Escherichia coli [TaxId: 562] [158925] (1)
      SQ P07111 46-195
      1. 2j2z picpicxrefxref
        complexed with co, so4
        1. region b:24-173 [145642] picpiclink
  7. Pap fimbrial major pilin protein PapA [158926]
    1. Escherichia coli [TaxId: 562] [158927] (5)
      SQ P04127 30-185! SQ P04127 32-185
      1. 2uy6 picpicxrefxref
        mutant
        1. region b:10-163 [145763] picpiclink
      2. 2uy7 picpicxrefxrefxrefxrefxrefxrefxrefxref
        complexed with so4; mutant
        1. region b:8-163 [145764] picpiclink
      3. 2uy7 picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2UY7 B:8-163
        complexed with so4; mutant
        1. region d:8-163 [145765] picpiclink
      4. 2uy7 picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2UY7 B:8-163
        complexed with so4; mutant
        1. region f:8-163 [145766] picpiclink
      5. 2uy7 picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2UY7 B:8-163
        complexed with so4; mutant
        1. region h:8-163 [145767] picpiclink
  8. Invasin AfaD [158928]
    1. Escherichia coli [TaxId: 562] [158929] (4)
      SQ Q47038 27-147
      1. 2axw picpic
        complexed with cl, gol
        1. region a:1-121 [146075] picpiclink
      2. 2axw picpic
        automatically matched to 2AXW A:1-121
        complexed with cl, gol
        1. region b:1-121 [146076] picpiclink
      3. 2ixq picpicxref
        1. region a:2-122 [145550] picpiclink
      4. 2fvn picpic
        1. region a:2-122 [147050] picpiclink

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site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk