Structural Classification of Proteins

Fold: Prealbumin-like

: sandwich; 7 strands in 2 sheets, greek-key
variations: some members have additional 1-2 strands to common fold

Lineage:

Root: scop
Class: All beta proteins [48724]
Fold: Prealbumin-like [49451]
sandwich; 7 strands in 2 sheets, greek-key
variations: some members have additional 1-2 strands to common fold

Superfamilies:

Starch-binding domain-like [49452] (3)
uperfamily
1. Rhamnogalacturonase B, RhgB, middle domain [110091] (1)
  1. Rhamnogalacturonase B, RhgB, middle domain [110092]
    1. Aspergillus aculeatus [TaxId: 5053] [110093] (1)
      SQ Q00019
2. Starch-binding domain [49453] (8)
  1. Cyclodextrin glycosyltransferase, C-terminal domain [49454]
    this domain is the last one in the protein chain
    1. Bacillus circulans, different strains [TaxId: 1397] [49455] (36)
    2. Bacillus stearothermophilus [TaxId: 1422] [49456] (1)
    3. Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422] [49457] (2)
    4. Bacillus sp., strain 1011 [TaxId: 1409] [49458] (8)
      SQ P05618
    5. Thermoanaerobacterium thermosulfurigenes, EM1 [TaxId: 33950] [49459] (2)
    6. Thermoanaerobacterium [TaxId: 28895] [158931] (2)
  2. Glucoamylase, granular starch-binding domain [49460]
    1. Aspergillus niger [TaxId: 5061] [49461] (4)
  3. beta-amylase [49462]
    1. Bacillus cereus [TaxId: 1396] [49463] (15)
3. PUD-like [158932] (4)
  Pfam 03714; bacterial pullanase-associated domain
  1. Pullulanase PulA [158933]
    1. Klebsiella pneumoniae [TaxId: 573] [158934] (3)
      SQ P07206 39-169
    2. Streptococcus pneumoniae [TaxId: 1313] [158935] (2)
      SQ Q97SQ7 135-237! SQ Q97SQ7 238-353
    3. Streptococcus pyogenes [TaxId: 1314] [158936] (4)
      SQ Q1JEU6 105-211! SQ Q1JEU6 212-323
    4. Thermotoga maritima [TaxId: 2336] [158937] (5)
      SQ O33840 19-102
Carboxypeptidase regulatory domain-like [49464] (2)
uperfamily
1. Carboxypeptidase regulatory domain [49465] (2)
  1. Carboxypeptidase D C-terminal domain [49466]
    1. Crested duck (Lophonetta specularioides) [TaxId: 8836] [49467] (2)
  2. Carboxypeptidase M C-terminal domain [101557]
    1. Human (Homo sapiens) [TaxId: 9606] [101558] (1)
2. Pre-dockerin domain [141082] (1)
  PfamB 085396
  1. Cellulosomal scaffolding protein A [141083]
    1. Clostridium thermocellum [TaxId: 1515] [141084] (1)
      SQ Q06851 1697-1792
VHL [49468] (1)
uperfamily
1. VHL [49469] (1)
  1. VHL [49470]
    1. Human (Homo sapiens) [TaxId: 9606] [49471] (3)
Transthyretin (synonym: prealbumin) [49472] (1)
uperfamily
1. Transthyretin (synonym: prealbumin) [49473] (4)
  1. Transthyretin (synonym: prealbumin) [49474]
    sandwich; 8 strands in 2 sheets
    1. Human (Homo sapiens) [TaxId: 9606] [49475] (117)
      SQ P02766 31-143
    2. Rat (Rattus norvegicus) [TaxId: 10116] [49476] (4)
    3. Chicken (Gallus gallus) [TaxId: 9031] [49477] (1)
    4. Gilthead seabream (Sparus aurata) [TaxId: 8175] [101559] (4)
      SQ Q9PTT3
Cna protein B-type domain [49478] (1)
uperfamily
1. Cna protein B-type domain [49479] (2)
  Pfam 05738
  1. B repeat unit of collagen binding surface protein (cna) [49480]
    duplication: consists of two similar prealbumin-like domains
    1. Staphylococcus aureus [TaxId: 1280] [49481] (2)
  2. Transhydroxylase beta subunit, BthL, C-terminal domain [110094]
    the penultimate strand is in the other beta-sheet than in the Cna repeats
    1. Pelobacter acidigallici [TaxId: 35816] [110095] (6)
      SQ P80564
Aromatic compound dioxygenase [49482] (1)
uperfamily
1. Aromatic compound dioxygenase [49483] (6)
  sandwich; 9 strands in 2 sheets
  1. Catechol 1,2-dioxygenase [49484]
    contains alpha-helical dimerization subdomain at the N-terminus
    1. Acinetobacter calcoaceticus [TaxId: 471] [49485] (4)
  2. Protocatechuate-3,4-dioxygenase, alpha chain [49486]
    alpha and beta chains are derived from a single-chain protomer and share this fold
    1. Pseudomonas putida [TaxId: 303] [49487] (51)
    2. Acinetobacter calcoaceticus, adp1 [TaxId: 471] [49488] (16)
  3. Protocatechuate-3,4-dioxygenase, beta chain [49489]
    1. Pseudomonas putida [TaxId: 303] [49490] (51)
    2. Acinetobacter calcoaceticus, adp1 [TaxId: 471] [49491] (16)
  4. Chlorocatechol 1,2-dioxygenase [110096]
    similar overall structure to Catechol 1,2-dioxygenase
    1. Rhodococcus opacus [TaxId: 37919] [110097] (1)
      SQ O67987
Hypothetical protein PA1324 [117074] (1)
uperfamily
1. Hypothetical protein PA1324 [117075] (1)
  1. Hypothetical protein PA1324 [117076]
    1. Pseudomonas aeruginosa [TaxId: 287] [117077] (1)
      SQ Q9I420 21-170