Structural Classification of Proteins
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Superfamily: Viral protein domain

forms homotrimers
link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: Viral protein domain [49817]
    sandwich; 9 strands in 2 sheets; jelly-roll; form trimers
  4. Superfamily: Viral protein domain [49818]
    forms homotrimers
    link to SUPERFAMILY database - Superfamily

Families:

  1. Top domain of virus capsid protein [49819] (4)
    this domain is inserted into a multihelical domain
    1. BTV vp7, central (top) domain [49820]
      1. Bluetongue virus [TaxId: 40051] [49821] (2) picpic
    2. RDV p8, central (top) domain [100924]
      1. Rice dwarf virus [TaxId: 10991] [101592] (1) picpic
      2. African horse sickness virus [TaxId: 40050] [49822] (1) picpic
    3. vp6, the major capsid protein of group A rotavirus [63718]
      1. Bovine rotavirus [TaxId: 10927] [63719] (1) picpic
  2. Influenza hemagglutinin headpiece [49823] (1)
    1. Hemagglutinin [49824]
      includes rudiment esterase domain
      1. Influenza A virus, different strains [TaxId: 11320] [49825] (49) picpic
  3. Hemagglutinin domain of haemagglutinin-esterase-fusion glycoprotein HEF1 [49826] (1)
    1. Hemagglutinin domain of haemagglutinin-esterase-fusion glycoprotein HEF1 [49827]
      includes irregular N- and C-terminal extensions
      1. Influenza C virus [TaxId: 11552] [49828] (1) picpic
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk