Structural Classification of Proteins
home mail help root up expand collapse

Superfamily: SMAD/FHA domain

has a few short helices inserted in loops
link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: SMAD/FHA domain [49878]
    sandwich; 11 strands in 2 sheets; greek-key
  4. Superfamily: SMAD/FHA domain [49879]
    has a few short helices inserted in loops
    link to SUPERFAMILY database - Superfamily

Families:

  1. SMAD domain [49880] (4)
    1. Smad4 tumor suppressor C-terminal domain [49881]
      1. Human (Homo sapiens) [TaxId: 9606] [49882] (6) picpic
        SQ Q13485 314-546
    2. Smad3 MH2 domain [82030]
      1. Human (Homo sapiens) [TaxId: 9606] [82031] (4) picpic
        SQ P84022 228-425
    3. Smad2 MH2 domain [49883]
      1. Human (Homo sapiens) [TaxId: 9606] [49884] (2) picpic
    4. Smad1 [69233]
      1. Human (Homo sapiens) [TaxId: 9606] [69234] (1) picpic
  2. FHA domain [49885] (12)
    1. Phosphotyrosine binding domain of Rad53 [49886]
      1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [49887] (18) picpic
    2. Cell cycle checkpoint protein Chfr [74899]
      1. Human (Homo sapiens) [TaxId: 9606] [74900] (2) picpic
    3. Chk2 kinase [74901]
      1. Human (Homo sapiens) [TaxId: 9606] [74902] (1) picpic
    4. Kinase associated protein phosphatase [101622]
      1. Thale cress (Arabidopsis thaliana) [TaxId: 3702] [101623] (1) picpic
    5. FHA domain containing protein At4G14490 [101624]
      1. Thale cress (Arabidopsis thaliana) [TaxId: 3702] [101625] (1) picpic
    6. Antigen ki-67 [101626]
      1. Human (Homo sapiens) [TaxId: 9606] [101627] (2) picpic
    7. Polynucleotide kinase 3'-phosphatase [101628]
      1. Mouse (Mus musculus) [TaxId: 10090] [101629] (5) picpic
      2. Human (Homo sapiens) [TaxId: 9606] [141134] (1) picpic
        SQ Q96T60 8-108
    8. Afadin [141135]
      1. Mouse (Mus musculus) [TaxId: 10090] [141136] (1) picpic
        SQ Q9QZQ1 382-487
    9. Kinesin-like protein kif1c [141137]
      1. Human (Homo sapiens) [TaxId: 9606] [141138] (1) picpic
        SQ O43896 498-599
    10. Probable regulatory protein EmbR, C-terminal domain [141139]
      1. Mycobacterium tuberculosis [TaxId: 1773] [141140] (3) picpic
        SQ P66799 284-382
    11. Ubiquitin ligase protein RNF8 [141141]
      1. Human (Homo sapiens) [TaxId: 9606] [141142] (2) picpic
        SQ O76064 8-139
  3. Interferon regulatory factor 3 (IRF3), transactivation domain [101630] (1)
    weak sequence similarity to SMAD domain
    1. Interferon regulatory factor 3 (IRF3), transactivation domain [101631]
      1. Human (Homo sapiens) [TaxId: 9606] [101632] (2) picpic
  4. EssC N-terminal domain-like [141143] (1)
    PfamB 051221 covers two consecutive domains; the first one is of canonical topology, whereas the second domain has a cirular permutation, beginnig at strand 2 and ending at strand 1 of the canonical fold
    1. Protein EssC [141144]
      SAV0287; similar to DNA segregation ATPase and related proteins
      1. Staphylococcus aureus [TaxId: 1280] [141145] (2) picpic
        SQ Q8NYF3 1-78! SQ Q8NYF3 79-186
Enter search key:
MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk