Family: NirD-like

retains the common fold but lacks the Fe-S cluster

Lineage:

1. Root: scop
2. Class: All beta proteins [48724]
3. Fold: ISP domain [50021]
   consists of two all-beta subdomains: conserved small domain has a rubredoxin-like fold; larger domain consists of 6 beta-stands packed in either sandwich of two 3-stranded sheets or closed barrel (n=6; S=8)
4. Superfamily: ISP domain [50022]
   uperfamily
5. Family: NirD-like [158991]
   retains the common fold but lacks the Fe-S cluster

Protein Domains:

1. NADH-nitrite reductase small subunit NirD [158992]
   1. Escherichia coli [TaxId: 562] [158993] (1)
      SQ P0A9I8 1-108
      1. 2jo6
         1. region a:1-108 [148154]
   2. Erwinia carotovora [TaxId: 554] [158994] (1)
      SQ Q6CZS1 1-122
      1. 2jza
         1. region a:1-122 [148246]
   3. Vibrio parahaemolyticus [TaxId: 670] [158995] (8)
      SQ Q87HB1 4-111
      1. 3c0d
         1. region a:4-111 [155819]
      2. 3c0d
         automatically matched to 3C0D A:4-111
         1. region b:4-110 [155820]
      3. 3c0d
         automatically matched to 3C0D A:4-111
         1. region c:4-109 [155821]
      4. 3c0d
         automatically matched to 3C0D A:4-111
         1. region d:4-109 [155822]
      5. 3c0d
         automatically matched to 3C0D A:4-111
         1. region e:4-109 [155823]
      6. 3c0d
         automatically matched to 3C0D A:4-111
         1. region f:4-109 [155824]
      7. 3c0d
         automatically matched to 3C0D A:4-111
         1. region g:4-109 [155825]
      8. 3c0d
         automatically matched to 3C0D A:4-111
         1. region h:4-109 [155826]

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk