Structural Classification of Proteins
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Superfamily: Cell growth inhibitor/plasmid maintenance toxic component

contains insert beta-sheet subdomain and C-terminal helix
link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: SH3-like barrel [50036]
    barrel, partly opened; n*=4, S*=8; meander
    the last strand is interrupted by a turn of 3-10 helix
  4. Superfamily: Cell growth inhibitor/plasmid maintenance toxic component [50118]
    contains insert beta-sheet subdomain and C-terminal helix
    link to SUPERFAMILY database - Superfamily

Families:

  1. CcdB [50119] (1)
    1. CcdB [50120]
      topoisomerase poison
      1. Escherichia coli [TaxId: 562] [50121] (6)
        1. 3vub picpic
          complexed with cl
          1. chain a [24613] picpiclink
        2. 4vub picpic
          complexed with cl
          1. chain a [24614] picpiclink
        3. 1vub picpic
          complexed with cl
          1. chain a [24623] picpiclink
          2. chain b [24624] picpiclink
          3. chain c [24625] picpiclink
          4. chain d [24626] picpiclink
        4. 2vub picpic
          complexed with cl
          1. chain a [24615] picpiclink
          2. chain b [24616] picpiclink
          3. chain c [24617] picpiclink
          4. chain d [24618] picpiclink
          5. chain e [24619] picpiclink
          6. chain f [24620] picpiclink
          7. chain g [24621] picpiclink
          8. chain h [24622] picpiclink
        5. 1x75 picpicxrefxref
          automatically matched to d1vuba_
          1. region c:1-101 [121775] picpiclink
        6. 1x75 picpicxrefxref
          automatically matched to d1vuba_
          1. region d:1-101 [121776] picpiclink
  2. Kid/PemK [82075] (3)
    1. Kid toxin protein (ParD) [82076]
      1. Plasmid R1, from Escherichia coli [TaxId: 2482] [82077] (3)
        1. 1m1f picpic
          complexed with po4
          1. chain a [78401] picpiclink
          2. chain b [78402] picpiclink
        2. 2c06 picpic
          automatically matched to d1m1fa_
          1. region a:1-110 [129575] picpiclink
        3. 2c06 picpic
          automatically matched to d1m1fa_
          1. region b:1-110 [129576] picpiclink
    2. MazF protein [89303]
      1. Escherichia coli [TaxId: 562] [89304] (1)
        1. 1ub4 picpicxref
          complexed with the antidote protein MazE
          1. chain a [88399] picpiclink
          2. chain b [88400] picpiclink
    3. PemK-like protein YdcE [82078]
      1. Bacillus subtilis [TaxId: 1423] [82079] (1)
        1. 1ne8 picpic
          complexed with 1pg, acy
          1. chain a [80424] picpiclink
  3. Rv2302-like [141248] (1)
    different orientation for the extra C-terminal helix relative the SH3-like barrel
    1. Hypothetical protein Rv2302/MT2359 [141249]
      1. Mycobacterium tuberculosis [TaxId: 1773] [141250] (1)
        SQ P64983 1-80
        1. 2a7y picpic
          1. region a:1-80 [126382] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk