Structural Classification of Proteins
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Family: Tudor domain

Pfam 00567

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: SH3-like barrel [50036]
    barrel, partly opened; n*=4, S*=8; meander
    the last strand is interrupted by a turn of 3-10 helix
  4. Superfamily: Tudor/PWWP/MBT [63748]
    link to SUPERFAMILY database - Superfamily
  5. Family: Tudor domain [63749]
    Pfam 00567

Protein Domains:

  1. Survival motor neuron protein 1, smn [63750]
    1. Human (Homo sapiens) [TaxId: 9606] [63751] (2)
      1. 1mhn picpic
        1. chain a [84964] picpiclink
      2. 1g5v picpic
        1. chain a [60292] picpiclink
  2. p53-binding protein 1, 53BP1 [110163]
    duplication; contains two Tudor domains in tandem
    1. Human (Homo sapiens) [TaxId: 9606] [110164] (6)
      SQ Q12888 1485-1602 ! SQ Q12888 1484-1606
      1. 2g3r picpic
        automatically matched to d1ssfa1
        complexed with so4
        1. region a:1485-1537 [134570] picpiclink
      2. 2g3r picpic
        automatically matched to d1ssfa2
        complexed with so4
        1. region a:1538-1603 [134571] picpiclink
      3. 2ig0 picpic
        automatically matched to d1ssfa1
        complexed with mly, so4
        1. region a:1485-1537 [137350] picpiclink
      4. 2ig0 picpic
        automatically matched to d1ssfa2
        complexed with mly, so4
        1. region a:1538-1603 [137351] picpiclink
      5. 1xni picpic
        1. region a:1485-1537 [115582] picpiclink
        2. region a:1538-1602 [115583] picpiclink
        3. region b:1485-1537 [115584] picpiclink
        4. region b:1538-1602 [115585] picpiclink
        5. region c:1485-1537 [115586] picpiclink
        6. region c:1538-1602 [115587] picpiclink
        7. region d:1485-1537 [115588] picpiclink
        8. region d:1538-1602 [115589] picpiclink
        9. region e:1485-1537 [115590] picpiclink
        10. region e:1538-1602 [115591] picpiclink
        11. region f:1485-1537 [115592] picpiclink
        12. region f:1538-1602 [115593] picpiclink
        13. region g:1485-1537 [115594] picpiclink
        14. region g:1538-1602 [115595] picpiclink
        15. region h:1485-1537 [115596] picpiclink
        16. region h:1538-1602 [115597] picpiclink
        17. region i:1485-1537 [115598] picpiclink
        18. region i:1538-1602 [115599] picpiclink
        19. region j:1485-1537 [115600] picpiclink
        20. region j:1538-1602 [115601] picpiclink
      6. 1ssf picpic
        1. region a:7-60 [105982] picpiclink
        2. region a:61-129 [105983] picpiclink
  3. Tudor domain-containing protein 3, TDRD3 [141201]
    1. Mouse (Mus musculus) [TaxId: 10090] [141202] (1)
      SQ Q91W18 553-612
      1. 2d9t picpic
        1. region a:8-67 [131351] picpiclink
  4. Jumonji domain-containing protein 2A [141203]
    contains tandem repeat of two segment-swapped Tudor domains
    1. Human (Homo sapiens) [TaxId: 9606] [141204] (20)
      SQ O75164 897-955! SQ O75164 956-1011
      1. 2qqr picpic
        automatically matched to d2gf7a2
        complexed with so4
        1. region a:897-955 [151226] picpiclink
      2. 2qqr picpic
        automatically matched to d2gf7a1
        complexed with so4
        1. region a:956-1011 [151227] picpiclink
      3. 2qqr picpic
        automatically matched to d2gf7a2
        complexed with so4
        1. region b:897-955 [151228] picpiclink
      4. 2qqr picpic
        automatically matched to d2gf7a1
        complexed with so4
        1. region b:956-1011 [151229] picpiclink
      5. 2gfa picpic
        automatically matched to 2GF7 A:956-1011
        complexed with m3l
        1. region a:956-1008 [135089] picpiclink
      6. 2gfa picpic
        automatically matched to 2GF7 A:897-955
        complexed with m3l
        1. region a:897-955 [135090] picpiclink
      7. 2gfa picpic
        automatically matched to 2GF7 A:956-1011
        complexed with m3l
        1. region b:956-1011 [135091] picpiclink
      8. 2gfa picpic
        automatically matched to 2GF7 A:897-955
        complexed with m3l
        1. region b:897-955 [135092] picpiclink
      9. 2gf7 picpic
        complexed with so4
        1. region a:956-1011 [135081] picpiclink
      10. 2gf7 picpic
        complexed with so4
        1. region a:897-955 [135082] picpiclink
      11. 2gf7 picpic
        automatically matched to 2GF7 A:956-1011
        complexed with so4
        1. region b:956-1011 [135083] picpiclink
      12. 2gf7 picpic
        automatically matched to 2GF7 A:897-955
        complexed with so4
        1. region b:897-955 [135084] picpiclink
      13. 2gf7 picpic
        automatically matched to 2GF7 A:956-1011
        complexed with so4
        1. region c:956-1011 [135085] picpiclink
      14. 2gf7 picpic
        automatically matched to 2GF7 A:897-955
        complexed with so4
        1. region c:897-955 [135086] picpiclink
      15. 2gf7 picpic
        automatically matched to 2GF7 A:956-1011
        complexed with so4
        1. region d:956-1011 [135087] picpiclink
      16. 2gf7 picpic
        automatically matched to 2GF7 A:897-955
        complexed with so4
        1. region d:897-955 [135088] picpiclink
      17. 2qqs picpic
        automatically matched to d2gf7a2
        complexed with m3l
        1. region a:897-955 [151230] picpiclink
      18. 2qqs picpic
        automatically matched to d2gf7a1
        complexed with m3l
        1. region a:956-1005 [151231] picpiclink
      19. 2qqs picpic
        automatically matched to d2gf7a2
        complexed with m3l
        1. region b:899-955 [151232] picpiclink
      20. 2qqs picpic
        automatically matched to d2gf7a1
        complexed with m3l
        1. region b:956-1006 [151233] picpiclink
  5. Tudor and KH domain-containing protein TDRKH [141205]
    1. Human (Homo sapiens) [TaxId: 9606] [141206] (1)
      SQ Q9Y2W6 329-425
      1. 2diq picpic
        1. region a:8-104 [131531] picpiclink
  6. P100 co-activator, SND1 [141207]
    1. Human (Homo sapiens) [TaxId: 9606] [141208] (2)
      SQ Q7KZF4 705-794
      1. 2hqx picpic
        1. region a:8-97 [136675] picpiclink
      2. 2hqx picpic
        automatically matched to 2HQX A:8-97
        1. region b:8-97 [136676] picpiclink
  7. Lamin-b receptor [141209]
    1. Human (Homo sapiens) [TaxId: 9606] [141210] (1)
      SQ Q14739 1-55
      1. 2dig picpic
        1. region a:8-62 [131529] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk