Structural Classification of Proteins
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Fold: GroES-like

contains barrel, partly opened; n*=4, S*=8; meander

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: GroES-like [50128]
    contains barrel, partly opened; n*=4, S*=8; meander

Superfamilies:

  1. GroES-like [50129] (2)
    link to SUPERFAMILY database - Superfamily
    1. GroES [50130] (5)
      1. Chaperonin-10 (GroES) [50131]
        1. Escherichia coli [TaxId: 562] [50132] (31) picpic
        2. Mycobacterium tuberculosis [TaxId: 1773] [63753] (2) picpic
        3. Mycobacterium leprae [TaxId: 1769] [50133] (1) picpic
        4. Thermus thermophilus [TaxId: 274] [110172] (3) picpic
          SQ P61493 ! SQ P61492
      2. GP31 co-chaperonin [50134]
        1. Bacteriophage T4 [TaxId: 10665] [50135] (8) picpic
    2. Alcohol dehydrogenase-like, N-terminal domain [50136] (27)
      C-terminal domain is alpha/beta (classical Rossmann-fold)
      1. Alcohol dehydrogenase [50137]
        contains a Zn-finger subdomain, residues 94-117
        1. Horse (Equus caballus) [TaxId: 9796] [50138] (38) picpic
          SQ P00327
        2. Human (Homo sapiens), different isozymes [TaxId: 9606] [50139] (26) picpic
          SQ P00326 ! SQ P00325 ! SQ P07327
        3. Mouse (Mus musculus), class II [TaxId: 10090] [50140] (3) picpic
        4. Frog (Rana perezi) [TaxId: 8403] [89305] (2) picpic
        5. Cod (Gadus callarias) [TaxId: 8053] [50141] (1) picpic
        6. Archaeon Sulfolobus solfataricus [TaxId: 2287] [82080] (4) picpic
        7. Archaeon Aeropyrum pernix [TaxId: 56636] [101701] (1) picpic
        8. Pseudomonas aeruginosa [TaxId: 287] [101702] (1) picpic
        9. Bacillus stearothermophilus [TaxId: 1422] [101703] (1) picpic
      2. Hypothetical protein TM0436 [101704]
        1. Thermotoga maritima [TaxId: 2336] [101705] (1) picpic
      3. Hypothetical protein YhdH [101706]
        1. Escherichia coli [TaxId: 562] [101707] (2) picpic
          SQ P26646
      4. Hypothetical protein YahK [101708]
        1. Escherichia coli [TaxId: 562] [101709] (1) picpic
      5. Benzyl alcohol dehydrogenase [89306]
        1. Acinetobacter calcoaceticus [TaxId: 471] [89307] (1) picpic
      6. Bacterial secondary alcohol dehydrogenase [50142]
        1. Clostridium beijerinckii [TaxId: 1520] [50143] (3) picpic
        2. Thermoanaerobacter brockii [TaxId: 29323] [50144] (10) picpic
      7. Ketose reductase (sorbitol dehydrogenase) [50145]
        1. Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855] [50146] (1) picpic
        2. Human (Homo sapiens) [TaxId: 9606] [101710] (3) picpic
      8. Formaldehyde dehydrogenase [82081]
        1. Pseudomonas putida [TaxId: 303] [82082] (1) picpic
      9. Quinone oxidoreductase [50147]
        1. Escherichia coli [TaxId: 562] [50148] (1) picpic
        2. Thermus thermophilus [TaxId: 274] [89308] (2) picpic
        3. Human (Homo sapiens) [TaxId: 9606] [117168] (1) picpic
          SQ Q08257
      10. 2,4-dienoyl-CoA reductase [89309]
        1. Yeast (Candida tropicalis) [TaxId: 5482] [89310] (5) picpic
      11. Putative zinc-binding alcohol dehydrogenase [101711]
        1. Mouse (Mus musculus) [TaxId: 10090] [101712] (1) picpic
      12. Cinnamyl alcohol dehydrogenase, ADH6 [110173]
        1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [110174] (3) picpic
          SQ Q04894
      13. Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase [110175]
        1. Guinea pig (Cavia porcellus) [TaxId: 10141] [110176] (5) picpic
          SQ Q9EQZ5
      14. B. subtilis YhfP homologue [117169]
        1. Bacillus stearothermophilus [TaxId: 1422] [117170] (1) picpic
          SQ Q5L022; 96% sequence identity; Geobacillus kaustophilus TaxID:1462
      15. Hypothetical protein YhfP [117171]
        1. Bacillus subtilis [TaxId: 1423] [117172] (2) picpic
          SQ O07615
  2. SacY-like RNA-binding domain [50151] (1)
    link to SUPERFAMILY database - Superfamily
    1. BglG-like antiterminator proteins [50152] (2)
      1. SacY [50153]
        1. Bacillus subtilis [TaxId: 1423] [50154] (1) picpic
      2. LicT [74928]
        1. Bacillus subtilis [TaxId: 1423] [74929] (1) picpic

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site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk