Structural Classification of Proteins

Superfamily: PDZ domain-like

: peptide-binding domain
uperfamily

Lineage:

Root: scop
Class: All beta proteins [48724]
Fold: PDZ domain-like [50155]
contains barrel, partly opened; n*=4, S*=8; meander; capped by alpha-helix
Superfamily: PDZ domain-like [50156]
peptide-binding domain
uperfamily

Families:

PDZ domain [50157] (55)
Pfam 00595
1. Discs large protein homolog [50158]
  1. Human (Homo sapiens) [TaxId: 9606] [50159] (4)
    1. 1pdr
      third PDZ domain
      1. chain a [24771]
    2. 2i0i
      automatically matched to d1pdr__
      1. region a:462-542 [136953]
    3. 2i0i
      automatically matched to d1pdr__
      1. region b:462-542 [136954]
    4. 2i0i
      automatically matched to d1pdr__
      1. region c:462-542 [136955]
2. Cask/Lin-2 [50160]
  1. Human (Homo sapiens) [TaxId: 9606] [50161] (1)
    1. 1kwa
      complexed with so4
      1. chain a [24772]
      2. chain b [24773]
3. Synapse-associated protein 102 [101713]
  1. Human (Homo sapiens) [TaxId: 9606] [101714] (2)
    1. 2fe5
      2nd PDZ domain
      complexed with gol, so4
      1. region a:223-314 [133323]
    2. 1um7
      third PDZ domain
      1. chain a [99579]
4. Synaptic protein PSD-95 [50162]
  Synonym: synapse associated protein 90, sap90
  duplication: contains three PDZ domains
  1. Rat (Rattus norvegicus) [TaxId: 10116] [50163] (9)
    SQ P31016 62-154
    1. 1tp5
      automatically matched to 1TP3 A:302-403
      1. region a:302-403 [119305]
    2. 1tq3
      automatically matched to 1TP3 A:302-403
      1. region a:306-403 [119310]
    3. 1be9
      third PDZ domain
      1. chain a [24774]
    4. 1tp3
      1. region a:302-403 [119304]
    5. 1bfe
      third PDZ domain
      1. chain a [24775]
    6. 1rgr
      complexed with bal; mutant
      1. chain a [104931]
    7. 1qlc
      second PDZ domain
      1. chain a [24776]
    8. 1iu0
      first PDZ domain
      1. chain a [83707]
    9. 1iu2
      first PDZ domain
      1. chain a [83708]
  2. Human (Homo sapiens) [TaxId: 9606] [74932] (1)
    1. 1kef
      first PDZ domain
      1. chain a [72369]
5. Syntrophin [50164]
  1. Mouse (Mus musculus) [TaxId: 10090] [50165] (3)
    1. 1qav
      1. chain a [24777]
    2. 2pdz
      1. chain a [24778]
    3. 1z86
      automatically matched to d1qava_
      1. region a:79-164 [124690]
6. Syntenin 1 [89311]
  1. Human (Homo sapiens) [TaxId: 9606] [89312] (26)
    1. 1r6j
      second PDZ domain
      complexed with cl
      1. chain a [97151]
    2. 1nte
      second PDZ domain
      complexed with o
      1. chain a [86163]
    3. 1obx
      second PDZ domain; complexed with an interleukin 5 receptor alpha peptide, chain B
      complexed with co, so4
      1. chain a [86783]
    4. 1w9e
      automatically matched to d1obzb1
      complexed with bez
      1. region a:110-194 [120779]
    5. 1w9e
      automatically matched to d1ntea_
      complexed with bez
      1. region a:197-273 [120780]
    6. 1w9e
      automatically matched to d1obzb1
      complexed with bez
      1. region b:110-194 [120781]
    7. 1w9e
      automatically matched to d1ntea_
      complexed with bez
      1. region b:197-273 [120782]
    8. 1obz
      tandem of two PDZ domains; complexed with an interleukin 5 receptor alpha peptide, chain P
      complexed with act
      1. region a:111-194 [86786]
      2. region a:195-273 [86787]
      3. region b:108-194 [86788]
      4. region b:195-272 [86789]
    9. 1w9q
      automatically matched to d1obzb1
      complexed with bez
      1. region a:111-194 [120791]
    10. 1w9q
      automatically matched to d1ntea_
      complexed with bez
      1. region a:197-273 [120792]
    11. 1w9q
      automatically matched to d1obzb1
      complexed with bez
      1. region b:111-194 [120793]
    12. 1w9q
      automatically matched to d1ntea_
      complexed with bez
      1. region b:197-273 [120794]
    13. 1oby
      second PDZ domain; complexed with an interleukin 5 receptor alpha peptide, chains P and Q
      complexed with so4
      1. chain a [86784]
      2. chain b [86785]
    14. 1v1t
      automatically matched to d1obzb1
      complexed with bez
      1. region a:110-194 [119830]
    15. 1v1t
      automatically matched to d1ntea_
      complexed with bez
      1. region a:197-273 [119831]
    16. 1v1t
      automatically matched to d1obzb1
      complexed with bez
      1. region b:111-194 [119832]
    17. 1v1t
      automatically matched to d1ntea_
      complexed with bez
      1. region b:197-272 [119833]
    18. 1n99
      tandem of two PDZ domains
      complexed with mse
      1. region a:112-194 [85459]
      2. region a:195-273 [85460]
      3. region b:110-194 [85461]
      4. region b:195-272 [85462]
    19. 1ybo
      automatically matched to d1obzb1
      1. region a:111-194 [122897]
    20. 1ybo
      automatically matched to d1ntea_
      1. region a:197-273 [122898]
    21. 1ybo
      automatically matched to d1obzb1
      1. region b:110-194 [122899]
    22. 1ybo
      automatically matched to d1ntea_
      1. region b:197-272 [122900]
    23. 1w9o
      automatically matched to d1obzb1
      complexed with bez
      1. region a:110-194 [120787]
    24. 1w9o
      automatically matched to d1ntea_
      complexed with bez
      1. region a:197-273 [120788]
    25. 1w9o
      automatically matched to d1obzb1
      complexed with bez
      1. region b:110-194 [120789]
    26. 1w9o
      automatically matched to d1ntea_
      complexed with bez
      1. region b:197-272 [120790]
7. Segment polarity protein dishevelled homolog Dvl-2 [89313]
  1. African clawed frog (Xenopus laevis) [TaxId: 8355] [89314] (5)
    1. 2f0a
      automatically matched to d1l6oa_
      complexed with co, so4
      1. region a:251-342 [132661]
    2. 2f0a
      automatically matched to d1l6oa_
      complexed with co, so4
      1. region b:251-342 [132662]
    3. 2f0a
      automatically matched to d1l6oa_
      complexed with co, so4
      1. region c:251-340 [132663]
    4. 2f0a
      automatically matched to d1l6oa_
      complexed with co, so4
      1. region d:251-342 [132664]
    5. 1l6o
      complexed with a peptide from Daper 1, chains D, E and F
      complexed with mse
      1. chain a [84534]
      2. chain b [84535]
      3. chain c [84536]
  2. Mouse (Mus musculus) [TaxId: 10090] [101715] (1)
    1. 1mc7
      mutant
      1. chain a [91241]
8. Neuronal nitric oxide synthase, NNOS [50166]
  1. Rat (Rattus norvegicus) [TaxId: 10116] [50167] (3)
    1. 1qau
      1. chain a [24779]
    2. 1qav
      1. chain b [24780]
    3. 1b8q
      1. chain a [24781]
9. Phosphatase hPTP1e [50168]
  1. Human (Homo sapiens) [TaxId: 9606] [50169] (3)
    1. 1d5g
      PDZ2 domain
      1. chain a [70080]
    2. 3pdz
      PDZ2 domain
      1. chain a [24782]
    3. 1q7x
      alternatively spliced PDZ2 domain
      1. chain a [96059]
  2. Mouse (Mus musculus) [TaxId: 10090] [74930] (3)
    1. 1ozi
      alternatively spliced PDZ2 domain
      mutant
      1. chain a [93845]
    2. 1gm1
      PDZ2 domain
      1. chain a [70271]
    3. 1vj6
      automatically matched to d1gm1a_
      1. region a:9-102 [120064]
10. Na+/H+ exchanger regulatory factor, NHERF [63754]
  1. Human (Homo sapiens) [TaxId: 9606] [63755] (4)
    1. 1g9o
      first PDZ domain
      1. chain a [60400]
    2. 1i92
      first PDZ domain
      complexed with cl
      1. chain a [61990]
    3. 1gq4
      first PDZ domain
      complexed with cl
      1. chain a [70340]
    4. 1gq5
      first PDZ domain
      complexed with cl
      1. chain a [76274]
11. Inad [63756]
  1. Fruit fly (Drosophila melanogaster) [TaxId: 7227] [63757] (1)
    1. 1ihj
      first PDZ domain; complexed with a Norpa C-terminal peptide
      1. chain a [62382]
      2. chain b [62383]
12. Glutamate receptor interacting protein [82083]
  1. Rat (Rattus norvegicus) [TaxId: 10116] [82084] (3)
    1. 1m5z
      seventh PDZ domain
      1. chain a [78676]
    2. 1p1e
      first PDZ domain
      1. chain a [93898]
    3. 1p1d
      first and second PDZ domains
      1. region a:18-114 [93896]
      2. region a:115-213 [93897]
  2. Mouse (Mus musculus) [TaxId: 10090] [110177] (1)
    SQ Q925T6 461-570
    1. 1v5q
      Structural genomics target
      1. chain a [108383]
13. Erbin [82085]
  1. Human (Homo sapiens) [TaxId: 9606] [82086] (5)
    1. 2h3l
      automatically matched to d1n7ta_
      1. region a:1310-1412 [136046]
    2. 2h3l
      automatically matched to d1n7ta_
      1. region b:1314-1411 [136047]
    3. 1mfg
      complexed with the carboxy-terminal tail of the erbb2 receptor
      1. chain a [79043]
    4. 1mfl
      complexed with the carboxy-terminal tail of the erbb2 receptor
      1. chain a [79044]
    5. 1n7t
      complexed with a phage-derived peptide
      1. chain a [80275]
14. GTPase-binding domain of the cell polarity protein par6 (Par-6B) [89315]
  1. Mouse (Mus musculus) [TaxId: 10090] [89316] (1)
    1. 1nf3
      complexed with gnp, mg; mutant
      1. chain c [85596]
      2. chain d [85597]
  2. Fruit fly (Drosophila melanogaster) [TaxId: 7227] [101716] (3)
    SQ O97111 156-253; Cg5884-pa
    1. 1rzx
      complexed with peptide, chain B
      complexed with ace
      1. chain a [98236]
    2. 1x8s
      complexed with a Pals1 peptide, chain B
      1. chain a [114967]
    3. 1ry4
      1. chain a [98085]
15. Glutamate receptor-interacting protein 1, GRIP1 [101717]
  1. Rat (Rattus norvegicus) [TaxId: 10116] [101718] (2)
    1. 1n7e
      sixth PDZ domain
      1. chain a [91691]
    2. 1n7f
      sixth PDZ domain; complexed with liprin C-terminal peptide, chains C and D
      1. chain a [91692]
      2. chain b [91693]
16. Membrane associated guanylate kinase inverted-2 (MAGI-2, KIAA0705) [101719]
  1. Human (Homo sapiens) [TaxId: 9606] [101720] (5)
    SQ Q86UL8 412-522, 600-682, 774-865, 913-1015, 1141-1230
    1. 1ujv
      structural genomics; second PDZ domain
      1. chain a [99470]
    2. 1ueq
      structural genomics; first PDZ domain
      1. chain a [99271]
    3. 1uew
      structural genomics; fourth PDZ domain
      1. chain a [99281]
    4. 1uep
      structural genomics; third PDZ domain
      1. chain a [99270]
    5. 1wfv
      Structural genomics target; 5th PDZ domain (of 6)
      1. chain a [114594]
17. KIAA1526 protein [101721]
  1. Human (Homo sapiens) [TaxId: 9606] [101722] (3)
    1. 1ufx
      structural genomics; third PDZ domain
      1. chain a [99359]
    2. 1uf1
      structural genomics; second PDZ domain
      1. chain a [99288]
    3. 1uez
      structural genomics; first PDZ domain
      1. chain a [99286]
18. Hypothetical protein KIAA1095 [101723]
  1. Human (Homo sapiens) [TaxId: 9606] [101724] (2)
    SQ Q9UPQ7 246-339, 404-512
    1. 1uhp
      structural genomics; Rsgi Ruh-005 domain
      1. chain a [99400]
    2. 1wh1
      Structural genomics target; 4th PDZ domain
      1. chain a [114629]
19. Discs large 5 protein KIAA0583 [101725]
  1. Human (Homo sapiens) [TaxId: 9606] [101726] (1)
    1. 1uit
      structural genomics; Rsgi Ruh-006 domain
      1. chain a [99433]
20. Hypothetical protein KIAA0559 [101727]
  1. Human (Homo sapiens) [TaxId: 9606] [101728] (1)
    1. 1ujd
      structural genomics; Rsgi Ruh-003 domain
      1. chain a [99454]
21. Hypothetical protein KIAA1849 [101729]
  1. Human (Homo sapiens) [TaxId: 9606] [101730] (1)
    1. 1um1
      structural genomics; Rsgi Ruh-007 domain
      1. chain a [99578]
22. Scribble (KIAA0147) [101731]
  1. Human (Homo sapiens) [TaxId: 9606] [101732] (3)
    SQ Q14160 680-951, 1096-1193 # structure of 1st PDZ domain is also known, 1XQ5
    1. 1wha
      Structural genomics target; 2nd PDZ domain
      1. chain a [114638]
    2. 1uju
      structural genomics; 4th PDZ domain
      1. chain a [99469]
    3. 1x5q
      1st PDZ domain
      1. region a:8-104 [121717]
23. Shank1, PDZ domain [101733]
  SH3 and multiple ankyrin repeat domains protein 1
  1. Rat (Rattus norvegicus) [TaxId: 10116] [101734] (2)
    1. 1q3o
      complexed with br
      1. chain a [95700]
      2. chain b [95701]
    2. 1q3p
      1. chain a [95702]
      2. chain b [95703]
24. Zasp (Cypher, Oracle 1) [101735]
  1. Human (Homo sapiens) [TaxId: 9606] [101736] (1)
    1. 1rgw
      mutant
      1. chain a [97455]
  2. Mouse (Mus musculus) [TaxId: 10090] [117173] (1)
    SQ Q9D130 1-83
    1. 1wjl
      Structural genomics target; fragment
      1. chain a [114701]
25. Alpha-actinin-2 associated LIM protein [110178]
  1. Mouse (Mus musculus) [TaxId: 10090] [110179] (1)
    SQ O70209 4-93
    1. 1v5l
      Structural genomics target
      1. chain a [108378]
26. Glutamate receptor interacting protein 2, GRIP2 (KIAA1719) [110180]
  1. Human (Homo sapiens) [TaxId: 9606] [110181] (2)
    SQ Q9C0E4 238-341
    1. 1v62
      Structural genomics target
      1. chain a [108390]
    2. 1x5r
      4th PDZ domain
      1. region a:8-106 [121718]
27. Harmonin [110182]
  1. Mouse (Mus musculus) [TaxId: 10090] [110183] (1)
    SQ Q9ES64 741-850
    1. 1v6b
      Structural genomics target
      1. chain a [108394]
  2. Human (Homo sapiens) [TaxId: 9606] [141263] (1)
    SQ Q9Y6N9 201-301
    1. 1x5n
      1. region a:8-108 [121714]
28. Rhophilin-2 [110184]
  1. Mouse (Mus musculus) [TaxId: 10090] [110185] (1)
    SQ Q8BWR8 506-603
    1. 1vae
      Structural genomics target
      mutant
      1. chain a [108466]
29. PDZ-LIM protein mystique [110186]
  1. Mouse (Mus musculus) [TaxId: 10090] [110187] (1)
    SQ Q8R1G6 3-83
    1. 1vb7
      Structural genomics target
      1. chain a [108474]
30. Enigma homolog ENH [117174]
  1. Mouse (Mus musculus) [TaxId: 10090] [117175] (1)
    SQ Q8CI51 5-94
    1. 1wf7
      Structural genomics target
      1. chain a [114577]
31. DNA Regulating synaptic membrane exocytosis protein 2, RIMS2 [117176]
  1. Human (Homo sapiens) [TaxId: 9606] [117177] (1)
    SQ Q9UQ26 637-754; the structure of the 1st C2 domain (807-934) is also known (scop_sp 101565)
    1. 1wfg
      Structural genomics target
      1. chain a [114581]
32. Partitioning-defective 3-like protein, PAR3-L (RIKEN cDNA 2810455b10) [117178]
  1. Mouse (Mus musculus) [TaxId: 10090] [117179] (1)
    SQ Q5SV53 478-591
    1. 1wg6
      Structural genomics target
      1. chain a [114603]
33. Regulator of G-protein signaling 3, RGS3 [117180]
  1. Mouse (Mus musculus) [TaxId: 10090] [117181] (1)
    SQ Q9DC04 18-94
    1. 1whd
      Structural genomics target
      1. chain a [114641]
  2. Human (Homo sapiens) [TaxId: 9606] [141264] (2)
    SQ P49796 300-376
    1. 2f5y
      complexed with so4
      1. region a:19-95 [133015]
    2. 2f5y
      automatically matched to 2F5Y A:19-95
      complexed with so4
      1. region b:19-95 [133016]
34. PDZ domain containing protein 11, Pdzk11 [117182]
  1. Mouse (Mus musculus) [TaxId: 10090] [117183] (1)
    SQ Q9CZG9 37-127
    1. 1wi2
      Structural genomics target
      1. chain a [114659]
35. hypothetical PDZ domain containing protein Uqcrc2 (4930408O21Rik) [117184]
  1. Mouse (Mus musculus) [TaxId: 10090] [117185] (1)
    SQ Q9CR71 8-120
    1. 1wif
      Structural genomics target
      1. chain a [114669]
36. Tight junction protein ZO-2, Tjp2 [141265]
  1. Mouse (Mus musculus) [TaxId: 10090] [141266] (1)
    SQ Q9Z0U1 1-104
    1. 2csj
      1. region a:8-111 [130771]
37. Multiple PDZ domain protein [141267]
  1. Human (Homo sapiens) [TaxId: 9606] [141268] (4)
    SQ Q5VZ62 1138-1243! SQ Q5VZ62 1955-2042
    1. 2fcf
      PDZ 7
      1. region a:1148-1243 [133267]
    2. 2fne
      PDZ 13
      1. region a:1955-2042 [133813]
    3. 2fne
      automatically matched to 2FNE A:1955-2042
      1. region b:1955-2042 [133814]
    4. 2fne
      automatically matched to 2FNE A:1955-2042
      1. region c:1955-2042 [133815]
38. Afadin [141269]
  1. Human (Homo sapiens) [TaxId: 9606] [141270] (3)
    SQ P55196 985-1079! SQ P55196 987-1077
    1. 1t2m
      1. region a:2-93 [119133]
    2. 2exg
      automatically matched to 1XZ9 A:6-101
      complexed with stf
      1. region a:6-101 [132526]
    3. 1xz9
      1. region a:6-101 [122471]
39. Syntaxin binding protein 4 [141271]
  1. Mouse (Mus musculus) [TaxId: 10090] [141272] (1)
    SQ Q9WV89 12-107
    1. 1wi4
      1. region a:8-103 [120973]
40. Channel associated protein of synapse-110 [141273]
  Discs large homolog 2, PSD-93
  1. Human (Homo sapiens) [TaxId: 9606] [141274] (1)
    SQ Q15700 190-283
    1. 2byg
      1. region a:190-283 [129480]
41. Maguk p55 subfamily member 5 [141275]
  1. Mouse (Mus musculus) [TaxId: 10090] [141276] (1)
    SQ Q9JLB2 236-335
    Structure of the second L27 domain is known (scop_sp 101293)
    1. 1va8
      1. region a:8-107 [119903]
42. Neurabin-i [141277]
  1. Human (Homo sapiens) [TaxId: 9606] [141278] (1)
    SQ Q9ULJ8 500-593
    1. 1wf8
      1. region a:8-101 [120967]
43. Regulating synaptic membrane exocytosis protein 1, RIMS1 [141279]
  1. Rat (Rattus norvegicus) [TaxId: 10116] [141280] (1)
    SQ Q9JIR4 597-705
    1. 1zub
      1. region a:597-705 [125665]
  2. Human (Homo sapiens) [TaxId: 9606] [141281] (1)
    SQ Q86UR5 585-694
    1. 2css
      1. region a:8-115 [130780]
44. Amyloid beta A4 precursor protein-binding family A member 1 (APBA1, X11) [141282]
  1. Human (Homo sapiens) [TaxId: 9606] [141283] (7)
    SQ Q02410 656-740! SQ Q02410 657-743! SQ Q02410 657-745! SQ Q02410 743-822! SQ Q02410 745-823! SQ Q02410 746-839
    structure of the PTB domain is also known (scop_sp 50757)
    1. 1y7n
      2nd PDZ domain
      1. region a:12-90 [122700]
    2. 1x45
      1st PDZ domain
      1. region a:8-92 [121679]
    3. 1u38
      automatically matched to 1U37 A:19-105
      1. region a:19-105 [119502]
    4. 1u37
      1st PDZ domain
      1. region a:19-105 [119501]
    5. 1u3b
      1. region a:19-107 [119508]
    6. 1u3b
      1. region a:108-201 [119509]
    7. 1u39
      2nd PDZ domain
      1. region a:79-158 [119503]
45. Presynaptic protein sap97 [141284]
  PSD-95 homologue
  1. Rat (Rattus norvegicus) [TaxId: 10116] [141285] (1)
    SQ Q62696 221-313
    1. 1zok
      1. region a:221-313 [125451]
46. Tyrosine-protein phosphatase non-receptor type 4, PTPN4 [141286]
  1. Human (Homo sapiens) [TaxId: 9606] [141287] (1)
    SQ P29074 507-612
    1. 2cs5
      1. region a:8-113 [130747]
Tail specific protease PDZ domain [68933] (2)
1. Photosystem II D1 C-terminal processing protease [68934]
  1. Algae (Scenedesmus obliquus) [TaxId: 3088] [50171] (4)
    1. 1fc6
      mutant
      1. region a:157-248 [64738]
    2. 1fc9
      1. region a:157-248 [64742]
    3. 1fc7
      1. region a:157-248 [64740]
    4. 1fcf
      complexed with sul
      1. region a:157-248 [64744]
2. Tricorn protease [69253]
  1. Archaeon Thermoplasma acidophilum [TaxId: 2303] [69254] (4)
    1. 1k32
      1. region a:763-853 [68068]
      2. region b:763-853 [68072]
      3. region c:763-853 [68076]
      4. region d:763-853 [68080]
      5. region e:763-853 [68084]
      6. region f:763-853 [68088]
    2. 1n6e
      complexed with chm
      1. region a:763-853 [80149]
      2. region g:763-853 [80161]
      3. region c:763-853 [80153]
      4. region i:763-853 [80165]
      5. region e:763-853 [80157]
      6. region k:763-853 [80169]
    3. 1n6f
      complexed with dkt
      1. region a:763-853 [80173]
      2. region b:763-853 [80177]
      3. region c:763-853 [80181]
      4. region d:763-853 [80185]
      5. region e:763-853 [80189]
      6. region f:763-853 [80193]
    4. 1n6d
      complexed with chm, d10
      1. region a:763-853 [80125]
      2. region b:763-853 [80129]
      3. region c:763-853 [80133]
      4. region d:763-853 [80137]
      5. region e:763-853 [80141]
      6. region f:763-853 [80145]
HtrA-like serine proteases [74933] (4)
1. Protease Do (DegP, HtrA), C-terminal domains [74934]
  duplication: tandem repeat of two PDZ domains
  1. Escherichia coli [TaxId: 562] [74935] (27)
    1. 1ky9
      complexed with mse; mutant
      1. region a:260-353 [73198]
      2. region b:260-358 [73200]
      3. region b:359-446 [73201]
    2. 3cs0
      automatically matched to d1ky9b1
      1. region a:260-358 [156951]
    3. 3cs0
      automatically matched to d1ky9b2
      1. region a:359-446 [156952]
    4. 2zle
      automatically matched to d1ky9b1
      1. region a:215-313 [154632]
    5. 2zle
      automatically matched to d1ky9b2
      1. region a:314-396 [154633]
    6. 2zle
      automatically matched to d1ky9b1
      1. region b:611-709 [154635]
    7. 2zle
      automatically matched to d1ky9b2
      1. region b:710-792 [154636]
    8. 2zle
      automatically matched to d1ky9b1
      1. region c:1007-1105 [154638]
    9. 2zle
      automatically matched to d1ky9b2
      1. region c:1106-1188 [154639]
    10. 2zle
      automatically matched to d1ky9b1
      1. region e:1749-1847 [154641]
    11. 2zle
      automatically matched to d1ky9b2
      1. region e:1848-1930 [154642]
    12. 2zle
      automatically matched to d1ky9b1
      1. region f:2145-2243 [154644]
    13. 2zle
      automatically matched to d1ky9b2
      1. region f:2244-2326 [154645]
    14. 2zle
      automatically matched to d1ky9b1
      1. region g:2541-2639 [154647]
    15. 2zle
      automatically matched to d1ky9b2
      1. region g:2640-2722 [154648]
    16. 2zle
      automatically matched to d1ky9b1
      1. region h:2937-3035 [154650]
    17. 2zle
      automatically matched to d1ky9b2
      1. region h:3036-3118 [154651]
    18. 2zle
      automatically matched to d1ky9b1
      1. region i:3333-3431 [154653]
    19. 2zle
      automatically matched to d1ky9b2
      1. region i:3432-3514 [154654]
    20. 2zle
      automatically matched to d1ky9b1
      1. region j:3729-3827 [154656]
    21. 2zle
      automatically matched to d1ky9b2
      1. region j:3828-3910 [154657]
    22. 2zle
      automatically matched to d1ky9b1
      1. region k:4125-4223 [154659]
    23. 2zle
      automatically matched to d1ky9b2
      1. region k:4224-4306 [154660]
    24. 2zle
      automatically matched to d1ky9b1
      1. region l:4521-4619 [154662]
    25. 2zle
      automatically matched to d1ky9b2
      1. region l:4620-4702 [154663]
    26. 2zle
      automatically matched to d1ky9b1
      1. region m:4917-5015 [154665]
    27. 2zle
      automatically matched to d1ky9b2
      1. region m:5016-5098 [154666]
2. Mitochondrial serine protease HtrA2 [74936]
  1. Human (Homo sapiens) [TaxId: 9606] [74937] (3)
    1. 1lcy
      mutant
      1. region a:226-325 [73834]
    2. 2pzd
      automatically matched to d1lcya1
      complexed with edo
      1. region a:359-457 [149962]
    3. 2pzd
      automatically matched to d1lcya1
      complexed with edo
      1. region b:359-457 [149963]
3. Stress sensor protease DegS, C-terminal domain [110188]
  1. Escherichia coli [TaxId: 562] [110189] (7)
    SQ P31137 37-354 ! SQ P31137
    1. 1sot
      1. region a:255-353 [105852]
      2. region b:255-353 [105854]
      3. region c:255-353 [105856]
    2. 2r3y
      automatically matched to d1te0a1
      1. region a:255-352 [151565]
    3. 2r3y
      automatically matched to d1te0a1
      1. region b:255-352 [151567]
    4. 2r3y
      automatically matched to d1te0a1
      1. region c:255-352 [151569]
    5. 1soz
      1. region a:255-352 [105859]
      2. region b:255-353 [105861]
      3. region c:255-353 [105863]
    6. 1te0
      1. region a:255-354 [112400]
      2. region b:255-354 [112402]
    7. 1vcw
      1. region a:255-353 [108510]
      2. region b:255-353 [108512]
      3. region c:255-353 [108514]
4. Protease PepD [141288]
  1. Mycobacterium tuberculosis [TaxId: 1773] [141289] (6)
    SQ O53896 375-462
    Rv0983
    1. 2z9i
      automatically matched to d1y8ta1
      1. region a:227-314 [154248]
    2. 2z9i
      automatically matched to d1y8ta1
      1. region b:227-314 [154250]
    3. 2z9i
      automatically matched to d1y8ta1
      1. region c:227-314 [154252]
    4. 1y8t
      1. region a:227-314 [122763]
    5. 1y8t
      automatically matched to 1Y8T A:227-314
      1. region b:227-314 [122765]
    6. 1y8t
      automatically matched to 1Y8T A:227-314
      1. region c:227-314 [122767]
Interleukin 16 [50172] (1)
1. Interleukin 16 [50173]
  1. Human (Homo sapiens) [TaxId: 9606] [50174] (2)
    1. 1x6d
      1st PDZ domain
      1. region a:8-114 [121739]
    2. 1i16
      1. chain a [24787]
EpsC C-terminal domain-like [159046] (1)
PfamB 005596
1. General secretion pathway protein C, EpsC [159047]
  1. Vibrio cholerae [TaxId: 666] [159048] (3)
    SQ P45777 204-305! SQ P45777 219-305
    1. 2i6v
      1. region a:219-305 [147530]
    2. 2i4s
      1. region a:204-305 [147503]
    3. 2i4s
      automatically matched to 2I4S A:204-305
      1. region b:204-305 [147504]
MTH1368 C-terminal domain-like [159049] (1)
middle part of Pfam 02163
1. Uncharacterized protein MTH1368 [159050]
  1. Methanobacterium thermoautotrophicum [TaxId: 145262] [159051] (1)
    SQ O27421 208-310
    1. 2hga
      1. region a:23-125 [147282]