Structural Classification of Proteins
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Family: TRAM domain

Pfam 01938

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: OB-fold [50198]
    barrel, closed or partly opened n=5, S=10 or S=8; greek-key
  4. Superfamily: Nucleic acid-binding proteins [50249]
    link to SUPERFAMILY database - Superfamily
  5. Family: TRAM domain [101768]
    Pfam 01938

Protein Domains:

  1. rRNA (Uracil-5-)-methyltransferase RumA, N-terminal domain [101769]
    1. Escherichia coli [TaxId: 562] [101770] (3)
      1. 1uwv picpicxref
        complexed with cl, fs4, ni, po4
        1. region a:15-74 [100128] picpiclink
      2. 2bh2 picpicxrefxref
        automatically matched to d1uwva1
        complexed with fmu, sah, sf4
        1. region a:15-74 [128510] picpiclink
      3. 2bh2 picpicxrefxref
        automatically matched to d1uwva1
        complexed with fmu, sah, sf4
        1. region b:16-74 [128512] picpiclink
  2. Hypothetical protein MM1357 [141311]
    1. Methanosarcina mazei [TaxId: 2209] [141312] (1)
      SQ Q8PX65 1-68
      1. 1yez picpic
        1. region a:1-68 [123026] picpiclink
  3. Hypothetical protein MMP0076 [141313]
    1. Methanococcus maripaludis [TaxId: 39152] [141314] (1)
      SQ Q6M142 1-69
      1. 1yvc picpic
        1. region a:1-69 [124094] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk