Structural Classification of Proteins
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Fold: PRC-barrel domain

core: barrel, partly opened; n*=5, S*=8; meander

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: PRC-barrel domain [50345]
    core: barrel, partly opened; n*=5, S*=8; meander

Superfamilies:

  1. PRC-barrel domain [50346] (4)
    link to SUPERFAMILY database - Superfamily
    1. MTH1895 [101773] (1)
      homodimeric protein; subunits are composed of a stand-alone copy of this domain
      1. MTH1895 [101774]
        1. Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262] [101775] (1)
          1. 1pm3 picpic
            structural genomics
            1. chain a [94889] picpiclink
            2. chain b [94890] picpiclink
    2. Photosynthetic reaction centre, H-chain, cytoplasmic domain [50347] (3)
      1. Photosynthetic reaction centre [50348]
        1. Rhodopseudomonas viridis [TaxId: 1079] [50349] (11)
          1. 2i5n picpicxrefxrefxrefxref
            automatically matched to d1dxrh1
            complexed with bcb, bpb, fe2, hec, hto, lda, mq9, ns5, so4, unl, uq1
            1. region h:37-258 [137064] picpiclink
          2. 1dxr picpicxrefxrefxrefxref
            complexed with bcb, bpb, fe2, hec, lda, mq9, mst, ns5, so4; mutant
            1. region h:37-258 [25456] picpiclink
          3. 6prc picpicxrefxrefxrefxref
            complexed with 7mq, bcb, bpb, ceb, fe2, hem, lda, ns5, so4
            1. region h:37-258 [25457] picpiclink
          4. 3prc picpicxrefxrefxrefxref
            complexed with 7mq, bcb, bpb, fe2, hem, lda, ns5, so4
            1. region h:37-258 [25458] picpiclink
          5. 5prc picpicxrefxrefxrefxref
            complexed with 7mq, atz, bcb, bpb, fe2, hem, lda, ns5, so4
            1. region h:37-258 [25459] picpiclink
          6. 4prc picpicxrefxrefxrefxref
            complexed with 7mq, bcb, bpb, fe2, hem, lda, ns5, sma, so4
            1. region h:37-258 [25462] picpiclink
          7. 2prc picpicxrefxrefxrefxref
            complexed with 7mq, bcb, bpb, fe2, hem, lda, ns5, so4, uq2
            1. region h:37-258 [25461] picpiclink
          8. 1prc picpicxrefxrefxrefxref
            complexed with bcl, bpb, fe, hem, lda, mq7, ns1, so4, uq1
            1. region h:37-258 [25460] picpiclink
          9. 7prc picpicxrefxrefxrefxref
            complexed with 7mq, bcb, bpb, cet, fe2, hem, lda, ns5, so4
            1. region h:37-258 [25463] picpiclink
          10. 1r2c picpicxrefxrefxrefxref
            complexed with 7mq, bcb, bpb, fe2, hem, lda, ns5, so4, uq2
            1. region h:37-258 [96860] picpiclink
          11. 3d38 picpicxrefxrefxrefxref
            automatically matched to d1dxrh1
            complexed with bcb, bpb, fe2, hec, hto, lda, mq9, ns5, so4, uq1
            1. region h:37-258 [157274] picpiclink
        2. Rhodobacter sphaeroides [TaxId: 1063] [50350] (39)
          SQ P11846
          1. 1rzh picpicxrefxrefxref
            complexed with bcl, bph, cdl, fe2, gol, hto, lda, po4, spo, u10; mutant
            1. region h:36-248 [98162] picpiclink
          2. 1qov picpicxrefxrefxref
            1. region h:36-250 [25464] picpiclink
          3. 1ry5 picpicxrefxrefxref
            complexed with bcl, bph, cdl, fe2, gol, k, lda, po4, spo, u10; mutant
            1. region h:36-249 [98086] picpiclink
          4. 1rg5 picpicxrefxrefxref
            complexed with bcl, bph, cdl, fe, hto, lda, u10
            1. region h:36-250 [97423] picpiclink
          5. 1e6d picpicxrefxrefxref
            complexed with bcl, bph, fe, lda, po4, spn, u10; mutant
            1. region h:36-250 [25465] picpiclink
          6. 1aij picpicxrefxrefxref
            complexed with bcl, bph, fe2, lda, u10
            1. region h:36-256 [25466] picpiclink
            2. region t:36-256 [25467] picpiclink
          7. 1m3x picpicxrefxrefxref
            complexed with bcl, bph, cdl, cl, fe, ggd, pc2, spo, u10
            1. region h:36-248 [74433] picpiclink
          8. 1ogv picpicxrefxrefxref
            complexed with bcl, bph, cdl, cl, fe2, u10
            1. region h:36-247 [92948] picpiclink
          9. 1rqk picpicxrefxrefxref
            complexed with bcl, bph, cdl, fe, lda, sp2, u10
            1. region h:36-250 [97746] picpiclink
          10. 1l9b picpicxrefxrefxrefxref
            complexed with bcl, bph, cl, fe2, hem, hto, lda, na, u10
            1. region h:36-253 [73712] picpiclink
          11. 1rzz picpicxrefxrefxref
            complexed with bcl, bph, fe2, lda, spo, u10; mutant
            1. region h:36-256 [98238] picpiclink
            2. region t:36-256 [98244] picpiclink
          12. 1mps picpicxrefxrefxref
            complexed with bcl, bph, fe2, lda, po4, spn, u10; mutant
            1. region h:36-250 [25468] picpiclink
          13. 1kby picpicxrefxrefxref
            complexed with bcl, bph, cdl, cl, fe, spo, u10; mutant
            1. region h:36-246 [77327] picpiclink
          14. 1dv3 picpicxrefxrefxref
            complexed with bcl, bph, cd, cl, fe2, lda, u10
            1. region h:36-256 [25471] picpiclink
            2. region t:36-256 [25472] picpiclink
          15. 1ds8 picpicxrefxrefxref
            complexed with bcl, bph, cd, cl, fe2, lda, u10
            1. region h:36-256 [25469] picpiclink
            2. region t:36-256 [25470] picpiclink
          16. 1dv6 picpicxrefxrefxref
            complexed with bcl, bph, cl, fe2, lda, u10, zn
            1. region h:36-256 [25475] picpiclink
            2. region t:36-256 [25476] picpiclink
          17. 1fnq picpicxrefxrefxref
            complexed with bcl, bph, fe, lda, po4, spo, u10; mutant
            1. region h:36-249 [59916] picpiclink
          18. 1jgw picpicxrefxrefxref
            complexed with bcl, bph, cdl, fe, spo, u10; mutant
            1. region h:36-246 [63018] picpiclink
          19. 1rgn picpicxrefxrefxref
            complexed with bcl, bph, fe, lda, po4, spo, u10
            1. region h:36-250 [97440] picpiclink
          20. 1fnp picpicxrefxrefxref
            complexed with bcl, bph, fe, lda, po4, spo, u10; mutant
            1. region h:36-250 [59912] picpiclink
          21. 1aig picpicxrefxrefxref
            complexed with bcl, bph, fe2, u10
            1. region h:36-258 [25473] picpiclink
            2. region p:36-258 [25474] picpiclink
          22. 1s00 picpicxrefxrefxref
            complexed with bcl, bph, fe2, lda, spo, u10; mutant
            1. region h:36-256 [98246] picpiclink
            2. region t:36-256 [98252] picpiclink
          23. 1jgz picpicxrefxrefxref
            complexed with bcl, bph, cdl, fe, spo, u10; mutant
            1. region h:36-246 [63030] picpiclink
          24. 1rvj picpicxrefxrefxref
            complexed with bcl, bph, cdl, fe2, lda, po4, spo, u10; mutant
            1. region h:36-248 [97924] picpiclink
          25. 1e14 picpicxrefxrefxref
            complexed with bcl, bph, cdl, fe, lda, spn, u10; mutant
            1. region h:36-250 [25478] picpiclink
          26. 1jgy picpicxrefxrefxref
            complexed with bcl, bph, cdl, fe, spo, u10; mutant
            1. region h:36-250 [63026] picpiclink
          27. 1k6l picpicxrefxrefxref
            complexed with bcl, bph, cdl, fe, lda, spn, u10
            1. region h:36-250 [72084] picpiclink
          28. 1pcr picpicxrefxrefxref
            complexed with bcl, bph, fe, lda, po4, spo, u10
            1. region h:36-250 [25477] picpiclink
          29. 1k6n picpicxrefxrefxref
            complexed with bcl, bph, cdl, fe, lda, spn, u10; mutant
            1. region h:36-250 [72088] picpiclink
          30. 1jgx picpicxrefxrefxref
            complexed with bcl, bph, fe, spo, u10; mutant
            1. region h:36-250 [63022] picpiclink
          31. 1f6n picpicxrefxrefxref
            complexed with bcl, bph, fe, lda, po4, spo, u10; mutant
            1. region h:36-250 [59658] picpiclink
          32. 1umx picpicxrefxrefxref
            complexed with bcl, bpb, fe, lda, po4, spn, u10; mutant
            1. region h:36-250 [107961] picpiclink
          33. 1l9j picpicxrefxrefxrefxref
            complexed with bcl, bph, cl, fe2, hem, lda, u10
            1. region h:36-253 [73724] picpiclink
            2. region t:36-253 [73730] picpiclink
          34. 1jh0 picpicxrefxrefxref
            complexed with bcl, bph, fe, spo, u10; mutant
            1. region h:36-248 [63034] picpiclink
          35. 1pst picpicxrefxrefxref
            complexed with bcl, bph, crt, fe, u10; mutant
            1. region h:36-248 [25480] picpiclink
          36. 1pss picpicxrefxrefxref
            complexed with bcl, bph, crt, fe, u10
            1. region h:36-248 [25479] picpiclink
          37. 2rcr picpicxrefxrefxref
            complexed with bcl, bpa, fe, uq
            1. region h:36-255 [25481] picpiclink
          38. 1yst picpicxrefxrefxref
            complexed with bcl, bph, mn, spo, u10
            1. region h:36-260 [25482] picpiclink
          39. 4rcr picpicxrefxrefxref
            complexed with bcl, bog, bph, fe, u10
            1. region h:36-248 [25483] picpiclink
        3. Thermochromatium tepidum [TaxId: 1050] [50351] (1)
          1. 1eys picpicxrefxrefxrefxref
            complexed with bcl, bgl, bph, crt, fe, hem, lda, mq8, pef
            1. region h:59-259 [25484] picpiclink
    3. RIKEN cDNA 2310057j16 protein (KIAA1543) [110202] (1)
      contains an N-terminal alpha-haipin and other fold decorations
      1. RIKEN cDNA 2310057j16 protein (KIAA1543) [110203]
        1. Mouse (Mus musculus) [TaxId: 10090] [110204] (1)
          SQ Q80VC9 1112-1240
          1. 1ugj picpic
            Structural genomics target
            1. chain a [107826] picpiclink
    4. RimM C-terminal domain-like [141326] (1)
      1. 16S rRNA processing protein RimM, C-terminal domain [141327]
        1. Pseudomonas aeruginosa [TaxId: 287] [141328] (1)
          SQ Q9HXQ0 101-175
          1. 2f1l picpicxref
            complexed with gol, unl
            1. region a:101-175 [132780] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk