Structural Classification of Proteins
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Family: PNP-oxidase like

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: Split barrel-like [50474]
    barrel; n=6, S=10; greek-key
  4. Superfamily: FMN-binding split barrel [50475]
    related to the ferredoxin reductase-like FAD-binding domain
    link to SUPERFAMILY database - Superfamily
  5. Family: PNP-oxidase like [50476]

Protein Domains:

  1. FMN-binding protein [50477]
    1. Desulfovibrio vulgaris, strain Miyazaki F [TaxId: 881] [50478] (10)
      1. 1flm picpic
        complexed with fmn
        1. chain a [25747] picpiclink
        2. chain b [25748] picpiclink
      2. 1wli picpic
        automatically matched to d1axj__
        complexed with fmn; mutant
        1. region a:1-121 [121000] picpiclink
      3. 1wli picpic
        automatically matched to d1axj__
        complexed with fmn; mutant
        1. region b:1-121 [121001] picpiclink
      4. 1wll picpic
        automatically matched to d1axj__
        complexed with fmn; mutant
        1. region a:1-121 [121006] picpiclink
      5. 1wll picpic
        automatically matched to d1axj__
        complexed with fmn; mutant
        1. region b:1-121 [121007] picpiclink
      6. 1wlk picpic
        automatically matched to d1axj__
        complexed with fmn; mutant
        1. region a:1-121 [121002] picpiclink
      7. 1wlk picpic
        automatically matched to d1axj__
        complexed with fmn; mutant
        1. region b:1-121 [121003] picpiclink
      8. 1wlk picpic
        automatically matched to d1axj__
        complexed with fmn; mutant
        1. region c:1-121 [121004] picpiclink
      9. 1wlk picpic
        automatically matched to d1axj__
        complexed with fmn; mutant
        1. region d:1-121 [121005] picpiclink
      10. 1axj picpic
        complexed with fmn
        1. chain a [25749] picpiclink
  2. Pyridoxine 5'-phoshate oxidase (PNP oxidase) [50479]
    elaborated with additional secondary structures; active as dimer
    1. Human (Homo sapiens) [TaxId: 9606] [82120] (1)
      1. 1nrg picpic
        complexed with fmn, plp, po4, seo
        1. chain a [80694] picpiclink
    2. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [50480] (1)
      1. 1ci0 picpic
        complexed with fmn
        1. chain a [25750] picpiclink
        2. chain b [25751] picpiclink
    3. Escherichia coli [TaxId: 562] [50481] (7)
      SQ P28225
      1. 1dnl picpic
        1. chain a [25753] picpiclink
      2. 1g79 picpic
        complexed with fmn, plp, po4, seo
        1. chain a [25752] picpiclink
      3. 1jnw picpic
        complexed with fmn, plp, po4
        1. chain a [63200] picpiclink
      4. 1g77 picpic
        complexed with fmn, plp, po4
        1. chain a [25754] picpiclink
      5. 1g78 picpic
        complexed with fmn, plp, po4
        1. chain a [25756] picpiclink
      6. 1g76 picpic
        complexed with fmn, plp, po4
        1. chain a [25755] picpiclink
      7. 1wv4 picpic
        complexed with fmn, po4
        1. chain a [114912] picpiclink
        2. chain b [114913] picpiclink
    4. Pseudomonas aeruginosa [TaxId: 287] [117226] (1)
      SQ Q820A5
      1. 1t9m picpic
        complexed with acy, fmn, so4
        1. chain a [112364] picpiclink
        2. chain b [112365] picpiclink
    5. Pseudomonas fluorescens [TaxId: 294] [117227] (1)
      SQ Q51793
      1. 1ty9 picpic
        complexed with fmn, so4
        1. chain a [112827] picpiclink
        2. chain b [112828] picpiclink
    6. Mycobacterium tuberculosis [TaxId: 1773] [141347] (2)
      SQ P65682 24-112
      1. 2a2j picpic
        1. region a:24-224 [126033] picpiclink
      2. 2a2j picpic
        automatically matched to 2A2J A:24-224
        1. region b:24-224 [126034] picpiclink
  3. Hypothetical protein Alr5027 [110234]
    1. Cyanobacterium (Nostoc sp. PCC 7120) [TaxId: 103690] [110235] (1)
      SQ Q8YMA7
      1. 1vl7 picpic
        Structural genomics target
        complexed with edo
        1. chain a [108732] picpiclink
  4. NimA-related protein DR0842 [117228]
    1. Deinococcus radiodurans [TaxId: 1299] [117229] (5)
      SQ Q9RW27
      1. 2vpa picpic
        automatically matched to d1w3oa_
        complexed with act, pyr
        1. region a:2-195 [153421] picpiclink
      2. 1w3o picpic
        complexed with act, pyr
        1. region a:2-195 [144544] picpiclink
      3. 1w3p picpic
        complexed with act, pyr
        1. region a:2-195 [144545] picpiclink
      4. 1w3q picpic
        complexed with act, lac
        1. region a:2-195 [144546] picpiclink
      5. 1w3r picpic
        complexed with 2mn, act, pyr
        1. region a:2-195 [144547] picpiclink
  5. Hypothetical protein Rv1155 [117230]
    1. Mycobacterium tuberculosis [TaxId: 1773] [117231] (6)
      SQ O06553
      1. 1w9a picpic
        Structural genomics target
        1. chain a [114408] picpiclink
        2. chain b [114409] picpiclink
      2. 2aq6 picpic
        automatically matched to 1Y30 A:5-147
        complexed with plp
        1. region a:5-147 [127156] picpiclink
      3. 2aq6 picpic
        automatically matched to 1Y30 A:5-147
        complexed with plp
        1. region b:5-147 [127157] picpiclink
      4. 1xxo picpic
        1. chain a [116205] picpiclink
        2. chain b [116206] picpiclink
      5. 1y30 picpic
        complexed with fmn
        1. region a:5-147 [122576] picpiclink
      6. 1y30 picpic
        automatically matched to 1Y30 A:5-147
        complexed with fmn
        1. region b:5-147 [122577] picpiclink
  6. Hypothetical protein Rv2991 [117232]
    1. Mycobacterium tuberculosis [TaxId: 1773] [117233] (1)
      SQ O53240
      1. 1rfe picpic
        Structural genomics target
        1. chain a [111796] picpiclink
  7. Hypothetical protein BH0577 [141348]
    1. Bacillus halodurans [TaxId: 86665] [141349] (1)
      SQ Q9KFA8 10-165
      1. 2hti picpic
        complexed with fad, na
        1. region a:10-165 [136744] picpiclink
  8. Hypothetical protein PA4388 [141350]
    1. Pseudomonas aeruginosa [TaxId: 287] [141351] (2)
      SQ Q9HW16 2-239
      1. 2arz picpic
        complexed with cl, gol
        1. region a:2-239 [127225] picpiclink
      2. 2arz picpic
        automatically matched to 2ARZ A:2-239
        complexed with cl, gol
        1. region b:2-239 [127226] picpiclink
  9. General stress protein 26 [141352]
    1. Nostoc punctiforme pcc 73102 [TaxId: 63737] [141353] (2)
      1. 2i02 picpic
        complexed with cl, fmn, p33
        1. region a:5-147 [136936] picpiclink
      2. 2i02 picpic
        automatically matched to 2I02 A:5-147
        complexed with cl, fmn, p33
        1. region b:5-147 [136937] picpiclink
  10. Hypothetical protein Mll6688 [141354]
    binds FAD cofactor
    1. Mesorhizobium loti [TaxId: 381] [141355] (2)
      SQ Q988L5 1-148
      1. 2hq9 picpic
        complexed with cl, edo, fad
        1. region a:1-148 [136659] picpiclink
      2. 2hq9 picpic
        automatically matched to 2HQ9 A:1-148
        complexed with cl, edo, fad
        1. region b:1-147 [136660] picpiclink
  11. Cellular repressor of E1A-stimulated genes CREG1 [141356]
    1. Human (Homo sapiens) [TaxId: 9606] [141357] (4)
      SQ O75629 49-218
      1. 1xhn picpic
        1. region a:13-182 [122007] picpiclink
      2. 1xhn picpic
        automatically matched to 1XHN A:13-182
        1. region b:13-182 [122008] picpiclink
      3. 1xhn picpic
        automatically matched to 1XHN A:13-182
        1. region c:13-182 [122009] picpiclink
      4. 1xhn picpic
        automatically matched to 1XHN A:13-182
        1. region d:13-182 [122010] picpiclink
  12. Putative general stress protein BT1439 [141358]
    1. Bacteroides thetaiotaomicron [TaxId: 818] [141359] (2)
      SQ Q8A7U5 3-137
      1. 2fhq picpic
        1. region a:3-137 [133497] picpiclink
      2. 2fhq picpic
        automatically matched to 2FHQ A:3-137
        1. region b:4-137 [133498] picpiclink
  13. Hypotheical protein CAC3491 [141360]
    related to general stress protein 26(GS26) of B.subtilis
    1. Clostridium acetobutylicum [TaxId: 1488] [141361] (2)
      SQ Q97DI6 2-142
      1. 2hq7 picpic
        complexed with cl, edo
        1. region a:2-142 [136657] picpiclink
      2. 2hq7 picpic
        automatically matched to 2HQ7 A:2-142
        complexed with cl, edo
        1. region b:2-142 [136658] picpiclink
  14. Hypothetical protein Rv2074 [141362]
    1. Mycobacterium tuberculosis [TaxId: 1773] [141363] (1)
      SQ Q10682 11-135
      1. 2asf picpic
        complexed with cit, na
        1. region a:11-135 [127253] picpiclink
  15. 5-nitroimidazole resistance protein BT3078 [141364]
    1. Bacteroides thetaiotaomicron [TaxId: 818] [141365] (1)
      SQ Q8A377 1-157
      1. 2fg9 picpic
        complexed with edo, fad, ni
        1. region a:1-157 [133426] picpiclink
  16. Hypothetical protein Ta1372 [141366]
    1. Thermoplasma acidophilum [TaxId: 2303] [141367] (2)
      SQ Q9HIG7 16-208
      1. 2fur picpic
        complexed with edo
        1. region a:16-208 [134185] picpiclink
      2. 2fur picpic
        automatically matched to 2FUR A:16-208
        complexed with edo
        1. region b:19-208 [134186] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk