Structural Classification of Proteins
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Superfamily: Alanine racemase C-terminal domain-like

the barrel is decorated with additional structures
link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: Domain of alpha and beta subunits of F1 ATP synthase-like [50614]
    barrel, closed; n=6, S=8; greek-key
  4. Superfamily: Alanine racemase C-terminal domain-like [50621]
    the barrel is decorated with additional structures
    link to SUPERFAMILY database - Superfamily

Families:

  1. Alanine racemase [88682] (3)
    1. Alanine racemase [50623]
      1. Bacillus stearothermophilus [TaxId: 1422] [50624] (8) picpic
      2. Pseudomonas aeruginosa [TaxId: 287] [110243] (1) picpic
        SQ Q9HTQ2
      3. Streptomyces lavendulae [TaxId: 1914] [110244] (3) picpic
        SQ Q65YW7
  2. Eukaryotic ODC-like [88683] (6)
    barrel is open with strands 4 and 5 having swapped their positions, compared to the alanine racemase barrel
    1. Eukaryotic ornithine decarboxylase (ODC) [50625]
      1. Human (Homo sapiens) [TaxId: 9606] [50626] (1) picpic
      2. Mouse (Mus musculus) [TaxId: 10090] [50627] (1) picpic
      3. Trypanosoma brucei [TaxId: 5691] [50628] (5) picpic
        SQ P07805
    2. Diaminopimelate decarboxylase LysA [89350]
      1. Mycobacterium tuberculosis [TaxId: 1773] [89351] (2) picpic
      2. Escherichia coli [TaxId: 562] [101820] (2) picpic
      3. Archaeon Methanococcus jannaschii [TaxId: 2190] [110245] (2) picpic
        SQ Q58497
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk