Structural Classification of Proteins
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Fold: Ribosomal protein L25-like

barrel, closed; n=6, S=10; complex topology

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: Ribosomal protein L25-like [50714]
    barrel, closed; n=6, S=10; complex topology

Superfamilies:

  1. Ribosomal protein L25-like [50715] (2)
    link to SUPERFAMILY database - Superfamily
    1. Ribosomal protein L25-like [50716] (3)
      1. Ribosomal protein L25 [50717]
        1. Escherichia coli [TaxId: 562] [50718] (32)
          1. 1dfu picpic
            1. chain p [26936] picpiclink
          2. 2gyc picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1b75a_
            1. region t:1-94 [135854] picpiclink
          3. 2gya picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1b75a_
            1. region t:1-94 [135842] picpiclink
          4. 1b75 picpic
            1. chain a [26937] picpiclink
          5. 2qam picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1b75a_
            complexed with mg, nmy, zn
            1. region v:1-94 [150262] picpiclink
          6. 2qao picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1b75a_
            complexed with mg, nmy, zn
            1. region v:1-94 [150315] picpiclink
          7. 2i2t picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1b75a_
            complexed with mg, zn
            1. region v:1-94 [137004] picpiclink
          8. 2i2v picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1b75a_
            complexed with mg, zn
            1. region v:1-94 [137017] picpiclink
          9. 2qbe picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1b75a_
            complexed with mg, zn
            1. region v:1-94 [150482] picpiclink
          10. 2qbg picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1b75a_
            complexed with mg, zn
            1. region v:1-94 [150536] picpiclink
          11. 2qoz picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1b75a_
            complexed with mg, nmy, zn
            1. region v:1-94 [151138] picpiclink
          12. 2qp1 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1b75a_
            complexed with mg, nmy, zn
            1. region v:1-94 [151191] picpiclink
          13. 3df2 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1b75a_
            complexed with mg, zn
            1. region v:1-94 [157651] picpiclink
          14. 3df4 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1b75a_
            complexed with mg, zn
            1. region v:1-94 [157705] picpiclink
          15. 2qba picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1b75a_
            complexed with lll, mg, zn
            1. region v:1-94 [150375] picpiclink
          16. 2qbc picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1b75a_
            complexed with lll, mg, zn
            1. region v:1-94 [150428] picpiclink
          17. 1d6k picpic
            1. chain a [26938] picpiclink
          18. 2qbi picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1b75a_
            complexed with lll, mg, zn
            1. region v:1-94 [150590] picpiclink
          19. 2qbk picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1b75a_
            complexed with lll, mg, zn
            1. region v:1-94 [150644] picpiclink
          20. 2qov picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1b75a_
            complexed with mg, zn
            1. region v:1-94 [151032] picpiclink
          21. 2qox picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1b75a_
            complexed with mg, zn
            1. region v:1-94 [151085] picpiclink
          22. 1vs6 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1b75a_
            complexed with mg
            1. region v:1-94 [120500] picpiclink
          23. 1vs8 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1b75a_
            complexed with mg
            1. region v:1-94 [120514] picpiclink
          24. 2aw4 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1b75a_
            complexed with mg
            1. region v:1-94 [127405] picpiclink
          25. 2awb picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1b75a_
            complexed with mg
            1. region v:1-94 [127427] picpiclink
          26. 2z4l picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1b75a_
            complexed with mg, par, zn
            1. region v:1-94 [154100] picpiclink
          27. 2z4n picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1b75a_
            complexed with mg, par, zn
            1. region v:1-94 [154154] picpiclink
          28. 2vhm picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1b75a_
            complexed with mg; mutant
            1. region v:1-94 [153085] picpiclink
          29. 2vhn picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1b75a_
            complexed with mg
            1. region v:1-94 [153117] picpiclink
          30. 2rdo picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1b75a_
            1. region v:1-94 [151962] picpiclink
          31. 2j28 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1b75a_
            complexed with mg
            1. region v:1-94 [137969] picpiclink
          32. 3bbx picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1b75a_
            complexed with mg
            1. region v:1-94 [155119] picpiclink
      2. Ribosomal protein TL5 (general stress protein CTC) [63798]
        contains additional all-beta (sub)domain in the C-terminal extension
        1. Thermus thermophilus [TaxId: 274] [63799] (12)
          1. 1feu picpic
            complexed with a 5S rRNA fragment
            complexed with cd, mg
            1. chain a [59801] picpiclink
            2. chain d [59802] picpiclink
          2. 2j01 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            Representative structure
            1. region z:3-179 [145582] picpiclink
          3. 2j03 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2J01 Z:3-179
            complexed with lys
            1. region z:3-179 [145609] picpiclink
          4. 3d5b picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2J01 Z:3-179
            complexed with mg
            1. region z:3-179 [157366] picpiclink
          5. 3d5d picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2J01 Z:3-179
            complexed with mg
            1. region z:3-179 [157396] picpiclink
          6. 2v47 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2J01 Z:3-179
            1. region z:3-179 [152520] picpiclink
          7. 2v49 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2J01 Z:3-179
            1. region z:3-179 [152555] picpiclink
          8. 1vsp picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2J01 Z:3-179
            1. region t:3-179 [145800] picpiclink
          9. 2hgq picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2J01 Z:3-179
            1. region y:3-179 [145359] picpiclink
          10. 1vsa picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2J01 Z:3-179
            1. region t:3-179 [144531] picpiclink
          11. 2hgj picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2J01 Z:3-179
            1. region y:3-179 [145327] picpiclink
          12. 2hgu picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2J01 Z:3-179
            1. region y:3-179 [145391] picpiclink
        2. Deinococcus radiodurans [TaxId: 1299] [159200] (10)
          SQ Q9RX88 1-175
          1. 2zjr picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            Representative structure
            complexed with mg
            1. region s:1-175 [154572] picpiclink
          2. 1xbp picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2ZJR S:1-175
            complexed with mul
            1. region t:1-175 [145885] picpiclink
          3. 2zjq picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2ZJR S:1-175
            1. region s:1-175 [154543] picpiclink
          4. 3cf5 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2ZJR S:1-175
            complexed with mg, txx
            1. region s:1-175 [156559] picpiclink
          5. 2zjp picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2ZJR S:1-175
            complexed with mg, nsh, zn
            1. region s:1-175 [154511] picpiclink
          6. 3dll picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2ZJR S:1-175
            complexed with mg, zld, zn
            1. region s:1-175 [157796] picpiclink
          7. 1yl3 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2ZJR S:1-175
            1. region v:1-175 [144698] picpiclink
          8. 2b66 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2ZJR S:1-175
            1. region z:1-175 [144962] picpiclink
          9. 2b9n picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2ZJR S:1-175
            1. region z:1-175 [144975] picpiclink
          10. 2b9p picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to 2ZJR S:1-175
            1. region z:1-175 [144984] picpiclink
    2. Gln-tRNA synthetase (GlnRS), C-terminal (anticodon-binding) domain [50719] (2)
      1. Gln-tRNA synthetase (GlnRS), C-terminal (anticodon-binding) domain [50720]
        duplication, consists of two barrel domains with the swapping of N-terminal strands
        1. Escherichia coli [TaxId: 562] [50721] (14)
          1. 1gtr picpicxref
            protein/tRNA complex; complexed with atp
            1. region a:339-547 [26939] picpiclink
          2. 1qtq picpicxref
            protein/tRNA complex; complexed with qsi, so4
            1. region a:339-547 [26940] picpiclink
          3. 1zjw picpicxref
            automatically matched to d1euqa1
            complexed with amp, gln, so4
            1. region a:339-547 [125161] picpiclink
          4. 1qrs picpicxref
            protein/tRNA complex; complexed with atp; mutant
            1. region a:339-547 [26941] picpiclink
          5. 1o0c picpicxref
            complexed with amp, glu, so4; mutant
            1. region a:339-547 [86529] picpiclink
          6. 1o0b picpicxref
            complexed with amp, gln, so4; mutant
            1. region a:339-547 [86527] picpiclink
          7. 1qrt picpicxref
            protein/tRNA complex; complexed with atp; mutant
            1. region a:339-547 [26943] picpiclink
          8. 1exd picpicxref
            protein/tRNA complex; complexed with a, so4; mutant
            1. region a:339-547 [26944] picpiclink
          9. 1euy picpicxref
            protein/tRNA complex; complexed with qsi; mutant
            1. region a:339-547 [26945] picpiclink
          10. 1gts picpicxref
            protein/tRNA complex; complexed with amp
            1. region a:339-547 [26942] picpiclink
          11. 1nyl picpicxref
            1. region a:339-546 [80741] picpiclink
          12. 1qru picpicxref
            protein/tRNA complex; complexed with atp; mutant
            1. region a:339-547 [26946] picpiclink
          13. 1euq picpicxref
            protein/tRNA complex; complexed with qsi; mutant
            1. region a:339-547 [26947] picpiclink
          14. 1gsg picpicxref
            protein/tRNA complex
            1. region p:339-547 [26948] picpiclink
        2. Escherichia coli K12 (Escherichia coli K-12) [TaxId: 83333] [159201] (2)
          1. 2rd2 picpicxref
            automatically matched to d1euqa1
            complexed with qsi, so4; mutant
            1. region a:339-547 [151918] picpiclink
          2. 2re8 picpicxref
            automatically matched to d1euqa1
            complexed with gsu, so4; mutant
            1. region a:339-547 [151971] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk