Structural Classification of Proteins
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Superfamily: Ribosomal protein L25-like

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: Ribosomal protein L25-like [50714]
    barrel, closed; n=6, S=10; complex topology
  4. Superfamily: Ribosomal protein L25-like [50715]
    link to SUPERFAMILY database - Superfamily

Families:

  1. Ribosomal protein L25-like [50716] (3)
    1. Ribosomal protein L25 [50717]
      1. Escherichia coli [TaxId: 562] [50718] (32)
        1. 1dfu picpic
          1. chain p [26936] picpiclink
        2. 2gyc picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1b75a_
          1. region t:1-94 [135854] picpiclink
        3. 2gya picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1b75a_
          1. region t:1-94 [135842] picpiclink
        4. 1b75 picpic
          1. chain a [26937] picpiclink
        5. 2qam picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1b75a_
          complexed with mg, nmy, zn
          1. region v:1-94 [150262] picpiclink
        6. 2qao picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1b75a_
          complexed with mg, nmy, zn
          1. region v:1-94 [150315] picpiclink
        7. 2i2t picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1b75a_
          complexed with mg, zn
          1. region v:1-94 [137004] picpiclink
        8. 2i2v picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1b75a_
          complexed with mg, zn
          1. region v:1-94 [137017] picpiclink
        9. 2qbe picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1b75a_
          complexed with mg, zn
          1. region v:1-94 [150482] picpiclink
        10. 2qbg picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1b75a_
          complexed with mg, zn
          1. region v:1-94 [150536] picpiclink
        11. 2qoz picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1b75a_
          complexed with mg, nmy, zn
          1. region v:1-94 [151138] picpiclink
        12. 2qp1 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1b75a_
          complexed with mg, nmy, zn
          1. region v:1-94 [151191] picpiclink
        13. 3df2 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1b75a_
          complexed with mg, zn
          1. region v:1-94 [157651] picpiclink
        14. 3df4 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1b75a_
          complexed with mg, zn
          1. region v:1-94 [157705] picpiclink
        15. 2qba picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1b75a_
          complexed with lll, mg, zn
          1. region v:1-94 [150375] picpiclink
        16. 2qbc picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1b75a_
          complexed with lll, mg, zn
          1. region v:1-94 [150428] picpiclink
        17. 1d6k picpic
          1. chain a [26938] picpiclink
        18. 2qbi picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1b75a_
          complexed with lll, mg, zn
          1. region v:1-94 [150590] picpiclink
        19. 2qbk picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1b75a_
          complexed with lll, mg, zn
          1. region v:1-94 [150644] picpiclink
        20. 2qov picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1b75a_
          complexed with mg, zn
          1. region v:1-94 [151032] picpiclink
        21. 2qox picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1b75a_
          complexed with mg, zn
          1. region v:1-94 [151085] picpiclink
        22. 1vs6 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1b75a_
          complexed with mg
          1. region v:1-94 [120500] picpiclink
        23. 1vs8 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1b75a_
          complexed with mg
          1. region v:1-94 [120514] picpiclink
        24. 2aw4 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1b75a_
          complexed with mg
          1. region v:1-94 [127405] picpiclink
        25. 2awb picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1b75a_
          complexed with mg
          1. region v:1-94 [127427] picpiclink
        26. 2z4l picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1b75a_
          complexed with mg, par, zn
          1. region v:1-94 [154100] picpiclink
        27. 2z4n picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1b75a_
          complexed with mg, par, zn
          1. region v:1-94 [154154] picpiclink
        28. 2vhm picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1b75a_
          complexed with mg; mutant
          1. region v:1-94 [153085] picpiclink
        29. 2vhn picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1b75a_
          complexed with mg
          1. region v:1-94 [153117] picpiclink
        30. 2rdo picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1b75a_
          1. region v:1-94 [151962] picpiclink
        31. 2j28 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1b75a_
          complexed with mg
          1. region v:1-94 [137969] picpiclink
        32. 3bbx picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to d1b75a_
          complexed with mg
          1. region v:1-94 [155119] picpiclink
    2. Ribosomal protein TL5 (general stress protein CTC) [63798]
      contains additional all-beta (sub)domain in the C-terminal extension
      1. Thermus thermophilus [TaxId: 274] [63799] (12)
        1. 1feu picpic
          complexed with a 5S rRNA fragment
          complexed with cd, mg
          1. chain a [59801] picpiclink
          2. chain d [59802] picpiclink
        2. 2j01 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          Representative structure
          1. region z:3-179 [145582] picpiclink
        3. 2j03 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2J01 Z:3-179
          complexed with lys
          1. region z:3-179 [145609] picpiclink
        4. 3d5b picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2J01 Z:3-179
          complexed with mg
          1. region z:3-179 [157366] picpiclink
        5. 3d5d picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2J01 Z:3-179
          complexed with mg
          1. region z:3-179 [157396] picpiclink
        6. 2v47 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2J01 Z:3-179
          1. region z:3-179 [152520] picpiclink
        7. 2v49 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2J01 Z:3-179
          1. region z:3-179 [152555] picpiclink
        8. 1vsp picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2J01 Z:3-179
          1. region t:3-179 [145800] picpiclink
        9. 2hgq picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2J01 Z:3-179
          1. region y:3-179 [145359] picpiclink
        10. 1vsa picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2J01 Z:3-179
          1. region t:3-179 [144531] picpiclink
        11. 2hgj picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2J01 Z:3-179
          1. region y:3-179 [145327] picpiclink
        12. 2hgu picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2J01 Z:3-179
          1. region y:3-179 [145391] picpiclink
      2. Deinococcus radiodurans [TaxId: 1299] [159200] (10)
        SQ Q9RX88 1-175
        1. 2zjr picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          Representative structure
          complexed with mg
          1. region s:1-175 [154572] picpiclink
        2. 1xbp picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2ZJR S:1-175
          complexed with mul
          1. region t:1-175 [145885] picpiclink
        3. 2zjq picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2ZJR S:1-175
          1. region s:1-175 [154543] picpiclink
        4. 3cf5 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2ZJR S:1-175
          complexed with mg, txx
          1. region s:1-175 [156559] picpiclink
        5. 2zjp picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2ZJR S:1-175
          complexed with mg, nsh, zn
          1. region s:1-175 [154511] picpiclink
        6. 3dll picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2ZJR S:1-175
          complexed with mg, zld, zn
          1. region s:1-175 [157796] picpiclink
        7. 1yl3 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2ZJR S:1-175
          1. region v:1-175 [144698] picpiclink
        8. 2b66 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2ZJR S:1-175
          1. region z:1-175 [144962] picpiclink
        9. 2b9n picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2ZJR S:1-175
          1. region z:1-175 [144975] picpiclink
        10. 2b9p picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
          automatically matched to 2ZJR S:1-175
          1. region z:1-175 [144984] picpiclink
  2. Gln-tRNA synthetase (GlnRS), C-terminal (anticodon-binding) domain [50719] (2)
    1. Gln-tRNA synthetase (GlnRS), C-terminal (anticodon-binding) domain [50720]
      duplication, consists of two barrel domains with the swapping of N-terminal strands
      1. Escherichia coli [TaxId: 562] [50721] (14)
        1. 1gtr picpicxref
          protein/tRNA complex; complexed with atp
          1. region a:339-547 [26939] picpiclink
        2. 1qtq picpicxref
          protein/tRNA complex; complexed with qsi, so4
          1. region a:339-547 [26940] picpiclink
        3. 1zjw picpicxref
          automatically matched to d1euqa1
          complexed with amp, gln, so4
          1. region a:339-547 [125161] picpiclink
        4. 1qrs picpicxref
          protein/tRNA complex; complexed with atp; mutant
          1. region a:339-547 [26941] picpiclink
        5. 1o0c picpicxref
          complexed with amp, glu, so4; mutant
          1. region a:339-547 [86529] picpiclink
        6. 1o0b picpicxref
          complexed with amp, gln, so4; mutant
          1. region a:339-547 [86527] picpiclink
        7. 1qrt picpicxref
          protein/tRNA complex; complexed with atp; mutant
          1. region a:339-547 [26943] picpiclink
        8. 1exd picpicxref
          protein/tRNA complex; complexed with a, so4; mutant
          1. region a:339-547 [26944] picpiclink
        9. 1euy picpicxref
          protein/tRNA complex; complexed with qsi; mutant
          1. region a:339-547 [26945] picpiclink
        10. 1gts picpicxref
          protein/tRNA complex; complexed with amp
          1. region a:339-547 [26942] picpiclink
        11. 1nyl picpicxref
          1. region a:339-546 [80741] picpiclink
        12. 1qru picpicxref
          protein/tRNA complex; complexed with atp; mutant
          1. region a:339-547 [26946] picpiclink
        13. 1euq picpicxref
          protein/tRNA complex; complexed with qsi; mutant
          1. region a:339-547 [26947] picpiclink
        14. 1gsg picpicxref
          protein/tRNA complex
          1. region p:339-547 [26948] picpiclink
      2. Escherichia coli K12 (Escherichia coli K-12) [TaxId: 83333] [159201] (2)
        1. 2rd2 picpicxref
          automatically matched to d1euqa1
          complexed with qsi, so4; mutant
          1. region a:339-547 [151918] picpiclink
        2. 2re8 picpicxref
          automatically matched to d1euqa1
          complexed with gsu, so4; mutant
          1. region a:339-547 [151971] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk