Structural Classification of Proteins
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Family: Zn-dependent arginine carboxypeptidase-like

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: TIM beta/alpha-barrel [51350]
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. Superfamily: Metallo-dependent hydrolases [51556]
    the beta-sheet barrel is similarly distorted and capped by a C-terminal helix
    has transition metal ions bound inside the barrel
    link to SUPERFAMILY database - Superfamily
  5. Family: Zn-dependent arginine carboxypeptidase-like [159408]

Protein Domains:

  1. Xaa-Pro dipeptidase [159409]
    1. Alteromonas macleodii [TaxId: 28108] [159410] (2)
      1. 2qs8 picpicxrefxref
        complexed with met, mg
        1. region a:64-373 [151312] picpiclink
      2. 2qs8 picpicxrefxref
        automatically matched to 2QS8 A:64-373
        complexed with met, mg
        1. region b:64-373 [151314] picpiclink
  2. Zn-dependent arginine carboxypeptidase [159411]
    1. Unidentified organism [TaxId: 32644] [159412] (16)
      1. 3be7 picpicxrefxrefxrefxrefxrefxrefxrefxref
        complexed with arg, gol, mg
        1. region a:57-359 [155164] picpiclink
      2. 3be7 picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 3BE7 A:57-359
        complexed with arg, gol, mg
        1. region b:57-359 [155166] picpiclink
      3. 3be7 picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 3BE7 A:57-359
        complexed with arg, gol, mg
        1. region c:57-359 [155168] picpiclink
      4. 3be7 picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 3BE7 A:57-359
        complexed with arg, gol, mg
        1. region d:57-359 [155170] picpiclink
      5. 3be7 picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 3BE7 A:57-359
        complexed with arg, gol, mg
        1. region e:57-359 [155172] picpiclink
      6. 3be7 picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 3BE7 A:57-359
        complexed with arg, gol, mg
        1. region f:57-359 [155174] picpiclink
      7. 3be7 picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 3BE7 A:57-359
        complexed with arg, gol, mg
        1. region g:57-359 [155176] picpiclink
      8. 3be7 picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 3BE7 A:57-359
        complexed with arg, gol, mg
        1. region h:57-359 [155178] picpiclink
      9. 3dug picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 3BE7 A:57-359
        complexed with arg, gol, zn
        1. region a:57-359 [157867] picpiclink
      10. 3dug picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 3BE7 A:57-359
        complexed with arg, gol, zn
        1. region b:57-359 [157869] picpiclink
      11. 3dug picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 3BE7 A:57-359
        complexed with arg, gol, zn
        1. region c:57-359 [157871] picpiclink
      12. 3dug picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 3BE7 A:57-359
        complexed with arg, gol, zn
        1. region d:57-359 [157873] picpiclink
      13. 3dug picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 3BE7 A:57-359
        complexed with arg, gol, zn
        1. region e:57-359 [157875] picpiclink
      14. 3dug picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 3BE7 A:57-359
        complexed with arg, gol, zn
        1. region f:57-359 [157877] picpiclink
      15. 3dug picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 3BE7 A:57-359
        complexed with arg, gol, zn
        1. region g:57-359 [157879] picpiclink
      16. 3dug picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 3BE7 A:57-359
        complexed with arg, gol, zn
        1. region h:57-359 [157881] picpiclink
  3. Uncharacterized protein EAJ56179 [159413]
    1. Unidentified organism [TaxId: 32644] [159414] (8)
      94% identity to the Burkholderia phytofirmans ortholog Bphyt_2089 (SQ B2T4I1)
      1. 2r8c picpicxrefxrefxrefxrefxrefxrefxrefxref
        complexed with zn
        1. region a:58-368 [151699] picpiclink
      2. 2r8c picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2R8C A:58-368
        complexed with zn
        1. region b:58-368 [151701] picpiclink
      3. 2r8c picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2R8C A:58-368
        complexed with zn
        1. region c:58-368 [151703] picpiclink
      4. 2r8c picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2R8C A:58-368
        complexed with zn
        1. region d:58-368 [151705] picpiclink
      5. 2r8c picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2R8C A:58-368
        complexed with zn
        1. region e:58-368 [151707] picpiclink
      6. 2r8c picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2R8C A:58-368
        complexed with zn
        1. region f:58-368 [151709] picpiclink
      7. 2r8c picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2R8C A:58-368
        complexed with zn
        1. region g:58-368 [151711] picpiclink
      8. 2r8c picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2R8C A:58-368
        complexed with zn
        1. region h:58-368 [151713] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk