Structural Classification of Proteins
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Family: N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: TIM beta/alpha-barrel [51350]
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. Superfamily: Metallo-dependent hydrolases [51556]
    the beta-sheet barrel is similarly distorted and capped by a C-terminal helix
    has transition metal ions bound inside the barrel
    link to SUPERFAMILY database - Superfamily
  5. Family: N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain [82261]

Protein Domains:

  1. N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain [82262]
    1. Bacillus subtilis [TaxId: 1423] [102086] (1)
      1. 1un7 picpicxref
        complexed with 2pe, fe, glp
        1. region a:58-358 [99658] picpiclink
        2. region b:58-358 [99660] picpiclink
    2. Thermotoga maritima [TaxId: 2336] [82263] (1)
      TM0814
      1. 1o12 picpicxref
        structural genomics
        CASP5
        complexed with fe, mse
        1. region a:44-331 [80759] picpiclink
        2. region b:44-331 [80761] picpiclink
    3. Escherichia coli [TaxId: 562] [141808] (10)
      SQ P0AF18 54-350
      1. 1yrr picpicxrefxref
        automatically matched to 1YMY A:54-350
        complexed with gol, po4
        1. region a:54-350 [123936] picpiclink
      2. 1yrr picpicxrefxref
        automatically matched to 1YMY A:54-350
        complexed with gol, po4
        1. region b:54-350 [123938] picpiclink
      3. 2p53 picpicxrefxref
        automatically matched to d1ymya2
        complexed with nng, zn; mutant
        1. region a:54-350 [149232] picpiclink
      4. 2p53 picpicxrefxref
        automatically matched to d1ymya2
        complexed with nng, zn; mutant
        1. region b:54-350 [149234] picpiclink
      5. 2p50 picpicxrefxrefxrefxref
        automatically matched to d1ymya2
        complexed with zn
        1. region a:54-350 [149224] picpiclink
      6. 2p50 picpicxrefxrefxrefxref
        automatically matched to d1ymya2
        complexed with zn
        1. region b:54-350 [149226] picpiclink
      7. 2p50 picpicxrefxrefxrefxref
        automatically matched to d1ymya2
        complexed with zn
        1. region c:54-350 [149228] picpiclink
      8. 2p50 picpicxrefxrefxrefxref
        automatically matched to d1ymya2
        complexed with zn
        1. region d:54-350 [149230] picpiclink
      9. 1ymy picpicxrefxref
        1. region a:54-350 [123709] picpiclink
      10. 1ymy picpicxrefxref
        automatically matched to 1YMY A:54-350
        1. region b:54-350 [123711] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk