Structural Classification of Proteins
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Superfamily: Bacterial luciferase-like

consists of clearly related families of somewhat different folds
link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: TIM beta/alpha-barrel [51350]
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. Superfamily: Bacterial luciferase-like [51679]
    consists of clearly related families of somewhat different folds
    link to SUPERFAMILY database - Superfamily

Families:

  1. Bacterial luciferase (alkanal monooxygenase) [51680] (2)
    typical (beta/alpha)8-barrel fold
    heterodimer of two similar chains
    1. Bacterial luciferase alpha chain, LuxA [88705]
      1. Vibrio harveyi [TaxId: 669] [88706] (3) picpic
    2. Bacterial luciferase beta chain, LuxB [88707]
      1. Vibrio harveyi [TaxId: 669] [88708] (5) picpic
  2. Non-fluorescent flavoprotein (luxF, FP390) [51683] (2)
    incomplete beta/alpha barrel with mixed beta-sheet of 7 strands
    1. Non-fluorescent flavoprotein (luxF, FP390) [51684]
      1. Photobacterium leiognathi [TaxId: 553611] [51685] (1) picpic
      2. Photobacterium phosphoreum [TaxId: 659] [51686] (1) picpic
  3. F420 dependent oxidoreductases [51687] (3)
    1. Coenzyme F420 dependent tetrahydromethanopterin reductase [51688]
      1. Archaeon Methanopyrus kandleri [TaxId: 2320] [51689] (1) picpic
      2. Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262] [63924] (1) picpic
    2. Coenzyme F420 dependent secondary alcohol dehydrogenase [102101]
      1. Archaeon Methanoculleus thermophilicus [TaxId: 2200] [102102] (1) picpic
  4. Ssud-like monoxygenases [82275] (2)
    1. Alkanesulfonate monooxygenase SsuD [82276]
      1. Escherichia coli [TaxId: 562] [82277] (2) picpic
    2. Putative monooxygenase YtnJ [110380]
      1. Bacillus subtilis [TaxId: 1423] [110381] (2) picpic
        SQ O34974
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk