Structural Classification of Proteins

Superfamily: Nicotinate/Quinolinate PRTase C-terminal domain-like

: incomplete beta/alpha barrel with parallel beta-sheet of 7 strands
uperfamily

Lineage:

Root: scop
Class: Alpha and beta proteins (a/b) [51349]
Mainly parallel beta sheets (beta-alpha-beta units)
Fold: TIM beta/alpha-barrel [51350]
contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
the first seven superfamilies have similar phosphate-binding sites
Superfamily: Nicotinate/Quinolinate PRTase C-terminal domain-like [51690]
incomplete beta/alpha barrel with parallel beta-sheet of 7 strands
uperfamily

Families:

NadC C-terminal domain-like [51691] (6)
1. Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), C-terminal domain [51692]
  1. Salmonella typhimurium [TaxId: 90371] [51693] (1)
    1. 1qap
      complexed with ntm
      1. region a:130-296 [29559]
      2. region b:130-296 [29560]
  2. Mycobacterium tuberculosis [TaxId: 1773] [51694] (4)
    1. 1qpo
      complexed with so4
      1. region a:117-285 [29561]
      2. region b:617-785 [29562]
      3. region c:1117-1285 [29563]
      4. region d:1617-1785 [29564]
      5. region e:2117-2285 [29565]
      6. region f:2617-2785 [29566]
    2. 1qpq
      complexed with ntm, so4
      1. region a:117-285 [29567]
      2. region b:617-785 [29568]
      3. region c:1117-1285 [29569]
      4. region d:1617-1785 [29570]
      5. region e:2117-2285 [29571]
      6. region f:2617-2785 [29572]
    3. 1qpr
      complexed with mw2, o4m, pht, ppc
      1. region a:117-285 [29573]
      2. region b:117-285 [29574]
      3. region c:117-285 [29575]
      4. region d:117-285 [29576]
      5. region e:117-285 [29577]
      6. region f:117-285 [29578]
    4. 1qpn
      complexed with nam
      1. region a:117-285 [29579]
      2. region b:617-785 [29580]
      3. region c:1117-1285 [29581]
      4. region d:1617-1785 [29582]
      5. region e:2117-2285 [29583]
      6. region f:2617-2785 [29584]
  3. Thermotoga maritima [TaxId: 2336] [89507] (1)
    TM1645
    1. 1o4u
      structural genomics
      1. region a:104-273 [86624]
      2. region b:104-273 [86626]
2. Nicotinate-nucleotide pyrophosphorylase PF1904 [141857]
  1. Pyrococcus furiosus [TaxId: 2261] [141858] (6)
    SQ Q8TZS9 111-389
    1. 2i14
      complexed with pcp, zn
      1. region a:111-389 [136966]
    2. 2i14
      automatically matched to 2I14 A:111-389
      complexed with pcp, zn
      1. region b:511-789 [136968]
    3. 2i14
      automatically matched to 2I14 A:111-389
      complexed with pcp, zn
      1. region c:1111-1389 [136970]
    4. 2i14
      automatically matched to 2I14 A:111-389
      complexed with pcp, zn
      1. region d:1511-1789 [136972]
    5. 2i14
      automatically matched to 2I14 A:111-389
      complexed with pcp, zn
      1. region e:2111-2389 [136974]
    6. 2i14
      automatically matched to 2I14 A:111-389
      complexed with pcp, zn
      1. region f:2511-2789 [136976]
3. Putative nicotinate phosphoribosyltransferase EF2626 [141859]
  includes extra C-terminal region that wraps around the N-terminal domain and contains an all-beta domain, this domain is distinct from but probably related to the Ta1145 extra domain
  1. Enterococcus faecalis [TaxId: 1351] [141860] (1)
    SQ Q830Y8 141-485
    1. 2f7f
      complexed with dpo, gol, nio, so4
      1. region a:141-485 [133088]
4. Nicotinate phosphoribosyltransferase Ta1145 [141861]
  includes extra C-terminal region that wraps around the N-terminal domain and contains a rubredoxin-like subdomain
  1. Thermoplasma acidophilum [TaxId: 2303] [141862] (1)
    SQ Q9HJ28 120-389
    1. 1ytd
      1. region a:120-389 [124006]
Monomeric nicotinate phosphoribosyltransferase C-terminal domain [110910] (3)
1. Nicotinate phosphoribosyltransferase, C-terminal domain [110911]
  1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [110912] (1)
    SQ P39683
    1. 1vlp
      Structural genomics target
      complexed with cl, edo, mes, po4
      1. region a:150-415 [108841]
      2. region b:150-415 [108843]
      3. region c:150-415 [108845]
      4. region d:150-415 [108847]
  2. Agrobacterium tumefaciens [TaxId: 358] [117391] (1)
    SQ Q8UIS9
    1. 1ybe
      Structural genomics target
      1. region a:168-433 [116605]
      2. region b:168-433 [116607]
  3. Pseudomonas aeruginosa [TaxId: 287] [141863] (4)
    SQ Q9HW26 143-397
    NAPRTase 2
    1. 1yir
      complexed with so4
      1. region a:145-399 [123330]
    2. 1yir
      automatically matched to 1YIR A:145-399
      complexed with so4
      1. region b:145-399 [123332]
    3. 1yir
      automatically matched to 1YIR A:145-399
      complexed with so4
      1. region c:145-399 [123334]
    4. 1yir
      automatically matched to 1YIR A:145-399
      complexed with so4
      1. region d:145-399 [123336]